RchiOBHm_Chr7g0200971
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
18639507 .. 18642061
2555 bp
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UTR
Exon/CDS
Intron
PRQ17991

Sequence Viewer

Length: 210 bp
ATGCTGACAAGTAGACAACTTGATAGGAGTGGGCTTGGAAAAGTTGGTGACCTTGACTCCCTCATGACTCAAGTTAGGCATCTACAGCTCAAGGATTCAGGAAATGAGGTCATAGCCTCAATAGCAAAAATCTTCAAACAAGTGGGATTGCATAAGATCTTGTCATTACTTGAAGCTGAAGACAATGATGTGCAAATTCATGCCTTCTAA

Protein Analysis

69

Amino Acids

7.64

Weight (kDa)

6.24

Isoelectric Point (pI)

32.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 13
AcsI RAATTY 1 cut(s) 195
AcuI CTGAAG 1 cut(s) 198
AgsI TTSAA 2 cut(s) 136, 173
AluBI AGCT 2 cut(s) 88, 176
AluI AGCT 2 cut(s) 88, 176
ApoI RAATTY 1 cut(s) 195
AsuHPI GGTGA 1 cut(s) 59
BbsI GAAGAC 1 cut(s) 186
BfmI CTRYAG 1 cut(s) 83
BglII AGATCT 1 cut(s) 156
BmsI GCATC 1 cut(s) 88
BpiI GAAGAC 1 cut(s) 186
BpuEI CTTGAG 2 cut(s) 54, 74
BsaXI ACNNNNNCTCC 2 cut(s) 41, 71
Bsp143I GATC 1 cut(s) 156
BspHI TCATGA 1 cut(s) 63
BssMI GATC 1 cut(s) 156
BstEII GGTNACC 1 cut(s) 47
BstKTI GATC 1 cut(s) 159
BstMBI GATC 1 cut(s) 156
BstMWI GCNNNNNNNGC 2 cut(s) 85, 122
BstPI GGTNACC 1 cut(s) 47
BstSFI CTRYAG 1 cut(s) 83
BstV2I GAAGAC 1 cut(s) 186
BstX2I RGATCY 1 cut(s) 156
BstYI RGATCY 1 cut(s) 156
CciI TCATGA 1 cut(s) 63
CviAII CATG 2 cut(s) 64, 200
CviJI RGCY 4 cut(s) 34, 88, 116, 176
CviKI_1 RGCY 4 cut(s) 34, 88, 116, 176
DpnI GATC 1 cut(s) 158
DpnII GATC 1 cut(s) 156
Eco57I CTGAAG 1 cut(s) 198
Eco91I GGTNACC 1 cut(s) 47
EcoO65I GGTNACC 1 cut(s) 47
FaeI CATG 2 cut(s) 67, 203
FaiI YATR 4 cut(s) 65, 113, 153, 201
FatI CATG 2 cut(s) 63, 199
FblI GTMKAC 1 cut(s) 13
Hin1II CATG 2 cut(s) 67, 203
HinfI GANTC 3 cut(s) 56, 67, 95
HphI GGTGA 1 cut(s) 59
Hpy166II GTNNAC 1 cut(s) 14
Hpy188III TCNNGA 2 cut(s) 64, 99
Hpy8I GTNNAC 1 cut(s) 14
HpyCH4V TGCA 2 cut(s) 151, 193
HpyF10VI GCNNNNNNNGC 2 cut(s) 85, 122
Hsp92II CATG 2 cut(s) 67, 203
Kzo9I GATC 1 cut(s) 156
LpnPI CCDG 1 cut(s) 84
LweI GCATC 1 cut(s) 88
MaeIII GTNAC 1 cut(s) 47
MalI GATC 1 cut(s) 158
MboI GATC 1 cut(s) 156
MboII GAAGA 2 cut(s) 124, 191
MflI RGATCY 1 cut(s) 156
MluCI AATT 1 cut(s) 195
MlyI GAGTC 2 cut(s) 50, 61
MnlI CCTC 3 cut(s) 71, 100, 127
MwoI GCNNNNNNNGC 2 cut(s) 85, 122
NdeII GATC 1 cut(s) 156
NlaIII CATG 2 cut(s) 67, 203
NmuCI GTSAC 1 cut(s) 47
PagI TCATGA 1 cut(s) 63
PfeI GAWTC 1 cut(s) 95
PleI GAGTC 2 cut(s) 50, 61
PpsI GAGTC 2 cut(s) 50, 61
PspEI GGTNACC 1 cut(s) 47
PsuI RGATCY 1 cut(s) 156
Sau3AI GATC 1 cut(s) 156
SchI GAGTC 2 cut(s) 50, 61
SetI ASST 4 cut(s) 54, 90, 111, 178
SfaNI GCATC 1 cut(s) 88
SfcI CTRYAG 1 cut(s) 83
SmlI CTYRAG 2 cut(s) 69, 89
SmoI CTYRAG 2 cut(s) 69, 89
Sse9I AATT 1 cut(s) 195
TasI AATT 1 cut(s) 195
TfiI GAWTC 1 cut(s) 95
TseFI GTSAC 1 cut(s) 47
Tsp45I GTSAC 1 cut(s) 47
TspDTI ATGAA 1 cut(s) 188
XapI RAATTY 1 cut(s) 195
XmiI GTMKAC 1 cut(s) 13
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.