RchiOBHm_Chr7g0233431

water dikinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
57826247 .. 57827180
934 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20924

Sequence Viewer

Length: 459 bp
ATGTTTCAGAAGTTACTAGAATCTTGTATTGAGCGTCGCCCTCTTCTGATCATCTCCCACAGAAGATTAAAAGATATACTGTTCCTTGATCTTGCTTTGGCTTCAGCTGTCGAAACAACCTTGGAAAGGGGACTCACAGATCTACATTTTTCTAACCCACCGAACTGGTACCGTATTAGTGAACTGTATAAACCCAATAATGATCAGTCGGCATTACAATCAAAGGCTATTTTTGATTGCTTACCATTAGTACTTGCTGATAGGTCTCAGTGCTACCAAAAGAAGATCCAGCCCAGTGCAAAATATCTTGGTAATGTGCTTGGTGTTCAGAAGTCAGTGATTGATACTTTTTCTGAGGAGTTACTAAGGGCTGGATCAGAGACTATTCTCTCTACTCTCATGAGTCTCATCAATCGCTTTGATCCTATTCTTAGAAAAGTGGCTAACTTGGGCTGGTAA

Protein Analysis

152

Amino Acids

17.35

Weight (kDa)

8.82

Isoelectric Point (pI)

52.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 168
AccB1I GGYRCC 1 cut(s) 168
AclWI GGATC 3 cut(s) 280, 382, 416
AcuI CTGAAG 1 cut(s) 87
AfaI GTAC 2 cut(s) 170, 252
AfiI CCNNNNNNNGG 1 cut(s) 126
AluBI AGCT 1 cut(s) 107
AluI AGCT 1 cut(s) 107
Alw26I GTCTC 3 cut(s) 270, 374, 410
AlwI GGATC 3 cut(s) 280, 382, 416
Asp718I GGTACC 1 cut(s) 168
BanI GGYRCC 1 cut(s) 168
BclI TGATCA 2 cut(s) 48, 202
BcoDI GTCTC 3 cut(s) 270, 374, 410
BfaI CTAG 1 cut(s) 17
BglII AGATCT 1 cut(s) 139
BmcAI AGTACT 1 cut(s) 252
BmiI GGNNCC 1 cut(s) 170
BmrI ACTGGG 1 cut(s) 288
BmuI ACTGGG 1 cut(s) 288
BsaI GGTCTC 1 cut(s) 270
BsaJI CCNNGG 1 cut(s) 120
Bsc4I CCNNNNNNNGG 1 cut(s) 126
Bse1I ACTGG 2 cut(s) 170, 294
BseDI CCNNGG 1 cut(s) 120
BseLI CCNNNNNNNGG 1 cut(s) 126
BseMII CTCAG 2 cut(s) 281, 345
BseNI ACTGG 2 cut(s) 170, 294
BseRI GAGGAG 1 cut(s) 371
BshNI GGYRCC 1 cut(s) 168
BslFI GGGAC 1 cut(s) 144
BslI CCNNNNNNNGG 1 cut(s) 126
BsmAI GTCTC 3 cut(s) 270, 374, 410
BsmFI GGGAC 1 cut(s) 144
Bso31I GGTCTC 1 cut(s) 270
Bsp143I GATC 7 cut(s) 48, 88, 139, 202, 285, 374, 421
BspCNI CTCAG 2 cut(s) 280, 346
BspHI TCATGA 1 cut(s) 399
BspLI GGNNCC 1 cut(s) 170
BspPI GGATC 3 cut(s) 280, 382, 416
BspT107I GGYRCC 1 cut(s) 168
BspTNI GGTCTC 1 cut(s) 270
BsrI ACTGG 2 cut(s) 170, 294
BssECI CCNNGG 1 cut(s) 120
BssMI GATC 7 cut(s) 48, 88, 139, 202, 285, 374, 421
BssT1I CCWWGG 1 cut(s) 120
Bst4CI ACNGT 3 cut(s) 81, 173, 186
Bst6I CTCTTC 1 cut(s) 48
BstDEI CTNAG 4 cut(s) 267, 354, 365, 431
BstENI CCTNNNNNAGG 1 cut(s) 124
BstKTI GATC 7 cut(s) 51, 91, 142, 205, 288, 377, 424
BstMAI GTCTC 3 cut(s) 270, 374, 410
BstMBI GATC 7 cut(s) 48, 88, 139, 202, 285, 374, 421
BstX2I RGATCY 2 cut(s) 139, 285
BstXI CCANNNNNNTGG 1 cut(s) 165
BstYI RGATCY 2 cut(s) 139, 285
BtsIMutI CAGTG 3 cut(s) 275, 301, 342
CciI TCATGA 1 cut(s) 399
CseI GACGC 1 cut(s) 23
Csp6I GTAC 2 cut(s) 169, 251
CviAII CATG 1 cut(s) 400
CviJI RGCY 7 cut(s) 101, 107, 227, 292, 371, 443, 453
CviKI_1 RGCY 7 cut(s) 101, 107, 227, 292, 371, 443, 453
CviQI GTAC 2 cut(s) 169, 251
DdeI CTNAG 4 cut(s) 267, 354, 365, 431
DpnI GATC 7 cut(s) 50, 90, 141, 204, 287, 376, 423
DpnII GATC 7 cut(s) 48, 88, 139, 202, 285, 374, 421
Eam1104I CTCTTC 1 cut(s) 48
EarI CTCTTC 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 120
Eco31I GGTCTC 1 cut(s) 270
Eco57I CTGAAG 1 cut(s) 87
EcoNI CCTNNNNNAGG 1 cut(s) 124
EcoT14I CCWWGG 1 cut(s) 120
ErhI CCWWGG 1 cut(s) 120
FaeI CATG 1 cut(s) 403
FaiI YATR 3 cut(s) 77, 189, 401
FaqI GGGAC 1 cut(s) 144
FatI CATG 1 cut(s) 399
FbaI TGATCA 2 cut(s) 48, 202
FspBI CTAG 1 cut(s) 17
HgaI GACGC 1 cut(s) 23
Hin1II CATG 1 cut(s) 403
HinfI GANTC 3 cut(s) 20, 132, 403
Hpy166II GTNNAC 1 cut(s) 182
Hpy188I TCNGA 5 cut(s) 9, 48, 330, 355, 379
Hpy188III TCNNGA 1 cut(s) 400
Hpy8I GTNNAC 1 cut(s) 182
Hpy99I CGWCG 1 cut(s) 39
HpyCH4III ACNGT 3 cut(s) 81, 173, 186
HpyCH4V TGCA 1 cut(s) 299
HpyF3I CTNAG 4 cut(s) 267, 354, 365, 431
Hsp92II CATG 1 cut(s) 403
KpnI GGTACC 1 cut(s) 172
Ksp22I TGATCA 2 cut(s) 48, 202
Kzo9I GATC 7 cut(s) 48, 88, 139, 202, 285, 374, 421
LpnPI CCDG 5 cut(s) 151, 302, 307, 357, 439
MaeI CTAG 1 cut(s) 17
MaeIII GTNAC 2 cut(s) 12, 360
MalI GATC 7 cut(s) 50, 90, 141, 204, 287, 376, 423
MboI GATC 7 cut(s) 48, 88, 139, 202, 285, 374, 421
MboII GAAGA 3 cut(s) 35, 75, 295
MflI RGATCY 2 cut(s) 139, 285
MlyI GAGTC 2 cut(s) 126, 412
MnlI CCTC 2 cut(s) 51, 349
MseI TTAA 1 cut(s) 68
MspA1I CMGCKG 1 cut(s) 107
NdeII GATC 7 cut(s) 48, 88, 139, 202, 285, 374, 421
NlaIII CATG 1 cut(s) 403
NlaIV GGNNCC 1 cut(s) 170
PagI TCATGA 1 cut(s) 399
PfeI GAWTC 1 cut(s) 20
PleI GAGTC 2 cut(s) 126, 411
PpsI GAGTC 2 cut(s) 126, 411
PspN4I GGNNCC 1 cut(s) 170
PsuI RGATCY 2 cut(s) 139, 285
PvuII CAGCTG 1 cut(s) 107
RsaI GTAC 2 cut(s) 170, 252
RsaNI GTAC 2 cut(s) 169, 251
SaqAI TTAA 1 cut(s) 68
Sau3AI GATC 7 cut(s) 48, 88, 139, 202, 285, 374, 421
ScaI AGTACT 1 cut(s) 252
SchI GAGTC 2 cut(s) 126, 412
SetI ASST 3 cut(s) 109, 122, 266
SspMI CTAG 1 cut(s) 17
StyI CCWWGG 1 cut(s) 120
TaaI ACNGT 3 cut(s) 81, 173, 186
TaqI TCGA 1 cut(s) 111
TatI WGTACW 1 cut(s) 250
TfiI GAWTC 1 cut(s) 20
Tru1I TTAA 1 cut(s) 68
Tru9I TTAA 1 cut(s) 68
TscAI CASTG 3 cut(s) 275, 301, 342
TspRI CASTG 3 cut(s) 275, 301, 342
XagI CCTNNNNNAGG 1 cut(s) 124
XspI CTAG 1 cut(s) 17
ZrmI AGTACT 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.