Rh7CG456200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
59980329 .. 59981454
1126 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG456200.1

Sequence Viewer

Length: 327 bp
ATGACATTCAGTGTTTTTCAGGACATTGATAAGAAGAACACTGATATTAAGATAGAAGAGAAGGCATTTGTAGTTGAGGAGAACTATGAGGTAATACATGCAGAAGGACATGGTTCTACTGTGAATTATAACTCAAGTTATGGCTCTCAAATGCCTGGATGTACAATTCAAATGGTGGAAGTTGAGGATTATATGGTGGGGGGGGATGTACAGCAAGTTGCGACAGCATGTATGCTGGAGGTTCTGGTGTGCTCTACGGGGACTACATTGAGGGACCGAAGGCCACTTCTACTGGATCTTGGTGTATATAGAGTGCTGGTGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

108

Amino Acids

12.1

Weight (kDa)

4.51

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 129
AclWI GGATC 1 cut(s) 303
AfaI GTAC 3 cut(s) 163, 210, 323
AgsI TTSAA 1 cut(s) 170
AjnI CCWGG 1 cut(s) 154
Alw21I GWGCWC 1 cut(s) 254
AlwI GGATC 1 cut(s) 303
AoxI GGCC 1 cut(s) 281
AspS9I GGNCC 1 cut(s) 274
AvaII GGWCC 1 cut(s) 274
Bbv12I GWGCWC 1 cut(s) 254
BciT130I CCWGG 1 cut(s) 156
BfaI CTAG 1 cut(s) 325
Bme1390I CCNGG 1 cut(s) 156
Bme18I GGWCC 1 cut(s) 274
BmgT120I GGNCC 1 cut(s) 274
BmiI GGNNCC 1 cut(s) 275
BmrFI CCNGG 1 cut(s) 156
BpmI CTGGAG 1 cut(s) 257
BpuEI CTTGAG 1 cut(s) 118
Bse1I ACTGG 1 cut(s) 297
BseBI CCWGG 1 cut(s) 156
BseGI GGATG 2 cut(s) 164, 211
BseNI ACTGG 1 cut(s) 297
BseRI GAGGAG 1 cut(s) 92
BshFI GGCC 1 cut(s) 283
BsiHKAI GWGCWC 1 cut(s) 254
BslFI GGGAC 2 cut(s) 274, 287
BsmFI GGGAC 2 cut(s) 274, 287
BsnI GGCC 1 cut(s) 283
Bsp1286I GDGCHC 1 cut(s) 254
Bsp1407I TGTACA 2 cut(s) 161, 208
Bsp143I GATC 1 cut(s) 295
BspANI GGCC 1 cut(s) 283
BspLI GGNNCC 1 cut(s) 275
BspPI GGATC 1 cut(s) 303
BsrGI TGTACA 2 cut(s) 161, 208
BsrI ACTGG 1 cut(s) 297
BssMI GATC 1 cut(s) 295
Bst2UI CCWGG 1 cut(s) 156
Bst4CI ACNGT 1 cut(s) 121
Bst6I CTCTTC 1 cut(s) 51
BstAUI TGTACA 2 cut(s) 161, 208
BstF5I GGATG 2 cut(s) 164, 211
BstKTI GATC 1 cut(s) 298
BstMBI GATC 1 cut(s) 295
BstNI CCWGG 1 cut(s) 156
BstNSI RCATGY 2 cut(s) 101, 231
BstSCI CCNGG 1 cut(s) 154
BstX2I RGATCY 1 cut(s) 295
BstYI RGATCY 1 cut(s) 295
BsuRI GGCC 1 cut(s) 283
BtsCI GGATG 2 cut(s) 164, 211
BtsIMutI CAGTG 2 cut(s) 16, 39
Cfr13I GGNCC 1 cut(s) 274
Csp6I GTAC 3 cut(s) 162, 209, 322
CviAII CATG 3 cut(s) 98, 110, 228
CviJI RGCY 2 cut(s) 144, 283
CviKI_1 RGCY 2 cut(s) 144, 283
CviQI GTAC 3 cut(s) 162, 209, 322
DpnI GATC 1 cut(s) 297
DpnII GATC 1 cut(s) 295
Eam1104I CTCTTC 1 cut(s) 51
EarI CTCTTC 1 cut(s) 51
Eco47I GGWCC 1 cut(s) 274
EcoRII CCWGG 1 cut(s) 154
FaeI CATG 3 cut(s) 101, 113, 231
FaqI GGGAC 2 cut(s) 274, 287
FatI CATG 3 cut(s) 97, 109, 227
FokI GGATG 2 cut(s) 171, 218
FspBI CTAG 1 cut(s) 325
GsuI CTGGAG 1 cut(s) 257
HaeIII GGCC 1 cut(s) 283
Hin1II CATG 3 cut(s) 101, 113, 231
Hpy166II GTNNAC 1 cut(s) 322
Hpy188III TCNNGA 1 cut(s) 20
Hpy8I GTNNAC 1 cut(s) 322
HpyAV CCTTC 3 cut(s) 55, 98, 273
HpyCH4III ACNGT 1 cut(s) 121
HpyCH4V TGCA 1 cut(s) 101
Hsp92II CATG 3 cut(s) 101, 113, 231
Kzo9I GATC 1 cut(s) 295
LpnPI CCDG 7 cut(s) 5, 141, 168, 221, 230, 278, 302
MaeI CTAG 1 cut(s) 325
MalI GATC 1 cut(s) 297
MboI GATC 1 cut(s) 295
MboII GAAGA 2 cut(s) 46, 68
MflI RGATCY 1 cut(s) 295
MhlI GDGCHC 1 cut(s) 254
MluCI AATT 2 cut(s) 124, 165
MnlI CCTC 5 cut(s) 70, 82, 178, 232, 264
MseI TTAA 1 cut(s) 48
MspR9I CCNGG 1 cut(s) 156
MvaI CCWGG 1 cut(s) 156
NdeII GATC 1 cut(s) 295
NlaIII CATG 3 cut(s) 101, 113, 231
NlaIV GGNNCC 1 cut(s) 275
NspI RCATGY 2 cut(s) 101, 231
PsiI TTATAA 1 cut(s) 129
Psp6I CCWGG 1 cut(s) 154
PspGI CCWGG 1 cut(s) 154
PspN4I GGNNCC 1 cut(s) 275
PspPI GGNCC 1 cut(s) 274
PsuI RGATCY 1 cut(s) 295
RsaI GTAC 3 cut(s) 163, 210, 323
RsaNI GTAC 3 cut(s) 162, 209, 322
SaqAI TTAA 1 cut(s) 48
Sau3AI GATC 1 cut(s) 295
Sau96I GGNCC 1 cut(s) 274
ScrFI CCNGG 1 cut(s) 156
SduI GDGCHC 1 cut(s) 254
SetI ASST 2 cut(s) 93, 243
SinI GGWCC 1 cut(s) 274
SmlI CTYRAG 1 cut(s) 133
SmoI CTYRAG 1 cut(s) 133
Sse9I AATT 2 cut(s) 124, 165
SspMI CTAG 1 cut(s) 325
StyD4I CCNGG 1 cut(s) 154
TaaI ACNGT 1 cut(s) 121
TaqII GACCGA 1 cut(s) 291
TasI AATT 2 cut(s) 124, 165
TatI WGTACW 3 cut(s) 161, 208, 321
Tru1I TTAA 1 cut(s) 48
Tru9I TTAA 1 cut(s) 48
TscAI CASTG 2 cut(s) 16, 46
TspRI CASTG 2 cut(s) 16, 46
VpaK11BI GGWCC 1 cut(s) 274
XceI RCATGY 2 cut(s) 101, 231
XspI CTAG 1 cut(s) 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.