water dikinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0233431 |
| rosa_roxburghii | Rroxscaffold_3G00226830 Rroxscaffold_3G00226890 Rroxscaffold_3G00227310 |
| rosa_rugosa | Rorug07G0280600 |
| rosa_samantha | Rh7AG436400 Rh7BG409400 Rh7BG409500 Rh7CG456100 Rh7CG456200 Rh7CG456300 Rh7DG425300 Rh7DG425400 Rh7DG425500 Rh7DG425600 |
| rosa_wichuraiana | Rw0G022480 Rw7G035900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 213 |
| AcuI | CTGAAG | 2 cut(s) | 20, 87 |
| AcvI | CACGTG | 1 cut(s) | 230 |
| AfaI | GTAC | 1 cut(s) | 144 |
| AflIII | ACRYGT | 2 cut(s) | 212, 227 |
| AgsI | TTSAA | 1 cut(s) | 20 |
| AjnI | CCWGG | 1 cut(s) | 238 |
| AluBI | AGCT | 2 cut(s) | 34, 107 |
| AluI | AGCT | 2 cut(s) | 34, 107 |
| AlwI | GGATC | 1 cut(s) | 213 |
| AoxI | GGCC | 1 cut(s) | 241 |
| AsuHPI | GGTGA | 1 cut(s) | 43 |
| BbrPI | CACGTG | 1 cut(s) | 230 |
| BbsI | GAAGAC | 1 cut(s) | 70 |
| BccI | CCATC | 2 cut(s) | 183, 187 |
| BciT130I | CCWGG | 1 cut(s) | 240 |
| BclI | TGATCA | 1 cut(s) | 48 |
| Bme1390I | CCNGG | 1 cut(s) | 240 |
| BmrFI | CCNGG | 1 cut(s) | 240 |
| BpiI | GAAGAC | 1 cut(s) | 70 |
| BsaAI | YACGTR | 1 cut(s) | 230 |
| Bse118I | RCCGGY | 1 cut(s) | 243 |
| Bse3DI | GCAATG | 1 cut(s) | 189 |
| BseBI | CCWGG | 1 cut(s) | 240 |
| BseGI | GGATG | 2 cut(s) | 194, 198 |
| BseMI | GCAATG | 1 cut(s) | 189 |
| BshFI | GGCC | 1 cut(s) | 243 |
| BsiSI | CCGG | 1 cut(s) | 244 |
| BslFI | GGGAC | 1 cut(s) | 144 |
| BsmFI | GGGAC | 1 cut(s) | 144 |
| BsnI | GGCC | 1 cut(s) | 243 |
| Bsp143I | GATC | 4 cut(s) | 48, 88, 162, 218 |
| BspANI | GGCC | 1 cut(s) | 243 |
| BspPI | GGATC | 1 cut(s) | 213 |
| BsrDI | GCAATG | 1 cut(s) | 189 |
| BsrFI | RCCGGY | 1 cut(s) | 243 |
| BssAI | RCCGGY | 1 cut(s) | 243 |
| BssMI | GATC | 4 cut(s) | 48, 88, 162, 218 |
| Bst2UI | CCWGG | 1 cut(s) | 240 |
| Bst4CI | ACNGT | 1 cut(s) | 81 |
| Bst6I | CTCTTC | 1 cut(s) | 48 |
| BstBAI | YACGTR | 1 cut(s) | 230 |
| BstC8I | GCNNGC | 1 cut(s) | 245 |
| BstF5I | GGATG | 2 cut(s) | 194, 198 |
| BstKTI | GATC | 4 cut(s) | 51, 91, 165, 221 |
| BstMBI | GATC | 4 cut(s) | 48, 88, 162, 218 |
| BstNI | CCWGG | 1 cut(s) | 240 |
| BstSCI | CCNGG | 1 cut(s) | 238 |
| BstV2I | GAAGAC | 1 cut(s) | 70 |
| BsuRI | GGCC | 1 cut(s) | 243 |
| BtsCI | GGATG | 2 cut(s) | 194, 198 |
| Cac8I | GCNNGC | 1 cut(s) | 245 |
| Cfr10I | RCCGGY | 1 cut(s) | 243 |
| Csp6I | GTAC | 1 cut(s) | 143 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 147, 182 |
| CviJI | RGCY | 5 cut(s) | 34, 40, 101, 107, 243 |
| CviKI_1 | RGCY | 5 cut(s) | 34, 40, 101, 107, 243 |
| CviQI | GTAC | 1 cut(s) | 143 |
| DpnI | GATC | 4 cut(s) | 50, 90, 164, 220 |
| DpnII | GATC | 4 cut(s) | 48, 88, 162, 218 |
| Eam1104I | CTCTTC | 1 cut(s) | 48 |
| EarI | CTCTTC | 1 cut(s) | 48 |
| Eco57I | CTGAAG | 2 cut(s) | 20, 87 |
| Eco72I | CACGTG | 1 cut(s) | 230 |
| EcoRII | CCWGG | 1 cut(s) | 238 |
| FaiI | YATR | 2 cut(s) | 77, 122 |
| FaqI | GGGAC | 1 cut(s) | 144 |
| FbaI | TGATCA | 1 cut(s) | 48 |
| FokI | GGATG | 2 cut(s) | 201, 205 |
| HaeIII | GGCC | 1 cut(s) | 243 |
| HapII | CCGG | 1 cut(s) | 244 |
| HinfI | GANTC | 2 cut(s) | 20, 132 |
| HpaII | CCGG | 1 cut(s) | 244 |
| HphI | GGTGA | 1 cut(s) | 43 |
| Hpy188I | TCNGA | 2 cut(s) | 9, 48 |
| HpyAV | CCTTC | 1 cut(s) | 232 |
| HpyCH4III | ACNGT | 1 cut(s) | 81 |
| HpyCH4IV | ACGT | 3 cut(s) | 145, 212, 229 |
| HpySE526I | ACGT | 3 cut(s) | 145, 212, 229 |
| KroI | GCCGGC | 1 cut(s) | 243 |
| KroNI | GCCGGC | 1 cut(s) | 245 |
| Ksp22I | TGATCA | 1 cut(s) | 48 |
| Kzo9I | GATC | 4 cut(s) | 48, 88, 162, 218 |
| LpnPI | CCDG | 2 cut(s) | 225, 252 |
| MaeII | ACGT | 3 cut(s) | 145, 212, 229 |
| MaeIII | GTNAC | 1 cut(s) | 12 |
| MalI | GATC | 4 cut(s) | 50, 90, 164, 220 |
| MboI | GATC | 4 cut(s) | 48, 88, 162, 218 |
| MboII | GAAGA | 2 cut(s) | 35, 75 |
| MlyI | GAGTC | 1 cut(s) | 126 |
| MnlI | CCTC | 2 cut(s) | 51, 64 |
| MroNI | GCCGGC | 1 cut(s) | 243 |
| MseI | TTAA | 1 cut(s) | 209 |
| MspA1I | CMGCKG | 1 cut(s) | 107 |
| MspI | CCGG | 1 cut(s) | 244 |
| MspR9I | CCNGG | 1 cut(s) | 240 |
| MvaI | CCWGG | 1 cut(s) | 240 |
| NaeI | GCCGGC | 1 cut(s) | 245 |
| NdeII | GATC | 4 cut(s) | 48, 88, 162, 218 |
| NgoMIV | GCCGGC | 1 cut(s) | 243 |
| PdiI | GCCGGC | 1 cut(s) | 245 |
| PfeI | GAWTC | 1 cut(s) | 20 |
| PleI | GAGTC | 1 cut(s) | 126 |
| PmaCI | CACGTG | 1 cut(s) | 230 |
| PmlI | CACGTG | 1 cut(s) | 230 |
| PpsI | GAGTC | 1 cut(s) | 126 |
| Ppu21I | YACGTR | 1 cut(s) | 230 |
| Psp6I | CCWGG | 1 cut(s) | 238 |
| PspCI | CACGTG | 1 cut(s) | 230 |
| PspGI | CCWGG | 1 cut(s) | 238 |
| PvuII | CAGCTG | 1 cut(s) | 107 |
| RsaI | GTAC | 1 cut(s) | 144 |
| RsaNI | GTAC | 1 cut(s) | 143 |
| SaqAI | TTAA | 1 cut(s) | 209 |
| Sau3AI | GATC | 4 cut(s) | 48, 88, 162, 218 |
| SchI | GAGTC | 1 cut(s) | 126 |
| ScrFI | CCNGG | 1 cut(s) | 240 |
| SetI | ASST | 6 cut(s) | 36, 56, 109, 148, 215, 232 |
| SspI | AATATT | 1 cut(s) | 207 |
| StyD4I | CCNGG | 1 cut(s) | 238 |
| TaaI | ACNGT | 1 cut(s) | 81 |
| TaiI | ACGT | 3 cut(s) | 148, 215, 232 |
| TaqI | TCGA | 1 cut(s) | 217 |
| TfiI | GAWTC | 1 cut(s) | 20 |
| Tru1I | TTAA | 1 cut(s) | 209 |
| Tru9I | TTAA | 1 cut(s) | 209 |