Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008355

Physical Location & Seq

Genomic Coordinates Forward (+)

34449440 .. 34451458

Gene Structure 2019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002458

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGAAGATGCAGATGATGCTGTTAATGGTAATGGTGGTCTCTCTTCTAGTTGCAATCGTGCATGGGCAGCAGAGCTACTTGGAAAACAATCAGCTCGACTGCGACAACGACTCCAACATCACCGCCGGCTACATCTGCAACGGCGCCGCTCCCTCATGCGCCTCCTACGTCACTTTCCGCTCCATCAGCCACTACAACACCCCCACCTCAATCGCCTCCCTCCTCGGCTCCACCCCATCCGACATCGCCGCCGCCAACAACATCTCCGACGTCGACCCCATCCCCACCGACACCTCCGTCCTCGTCCCCCTCAACTGCTCCTGCTCCGGCCCCTACTCCCAGCACAACGTCTCCTACACCCTGAAGCCCAACGACACCTACTTCGTCATCGCCAACAACACCTACCAGGGCCTCACCACCTGTCAGGCCCTCAGGCATCAGAACCCCTACGACCCTCTGAACCTCGAGGGCGGCCTTGTCATAGAAGTGCCGATCAGGTGTGCTTGCCCCACCGCCAAACAGACTGCCGCCGGGATCAAGTACCTGCTGGCCTACCTCATCGACTTGGACGACGATCTCGACAAAATAGCCATTCGCTTCGCCGTAGATGTACCCACTTTGCTCGAAGCCAACAACTTTAAGACCTCCGACGACGTCATCTATCCCTACCAAGCTGTTCTAGTTCCTCTCACAACCAAACCTTCTCCTCTTCAACTGAAGTATCCAAGCTCTCCTCCACCTCCGCCTTCTCCTCCTCCTCCTCTGCCGCCGTCATCACCAGCGCCTCCCTCACCACCAAGTGGAACTTCCAACAAGAAGTGGATCTTCATCGGCGTCGGCGTCGGAGCTGGCTGTCTCCTCCTACTTATATCTATCTTCGCCTTCCTCTTCTTGTCAAAACGACGACGCCGTCAGCACCGGCACCACTCTCCCAACCAAAAATTAAAGAGCTCCGGTAATAACAGGCAGAACTCGCTACCCACCACCACCACCACCACTACCACCTCCAACGACACAACAACATCGGGGTCGCCAATATCCACCAACGGGCTTAAAAACGCAGTGGAGTCTTTGACAGCTTACAAGTTCGAAGACCTGCAGAACGCCACTCAATTCTTCAACGAAGCCAACAGAATCGCCGGCTCCTCCGTCTTCAGAGCTACCTTTGACGGCGAAGATGCTGCCGTTAAGGTGATGACAGGCGACTTGTCCCTCTCCGTCGACCAGATCAACATACTAAAGCGGATCAACCACTCCAACATTATCAGCCTCTCAGGATTCTGCGTCCACAAAGGAAACACATACCTCGTCTACGAGTTTGCTGCTTCTGGCTCTCTCATAGATTGTCTTGGGTTGAAGGGCAACATTACTCCTCTGTCATGGAAGCAGAGAGTTCACATTGCCAATGACGTGGCCAATGCGCTCAACTATCTACACAACTTCACACACCCTCCATTAATCCACAAGAACCTGAACACCAGCAACATTCTCCTGGATGCAAACTTGAGAGCCAAGGTTGCCAATTTCGGTCTGGCAAGAGCTGTGGATTTGGGGAAGGAAGTCGAAGATGGAGGACAGGGATTTCAACTGACGAGACATGTGGTGGGTACACGGGGCTACATGGCGCCGGAGTACATGGAAAACGGGGTGATTACTCCGAAACTGGATGTGTTTGCATTTGGGGTTGTGTTGTTGGAGCTATTGTCCGGAAGACCAGCCTTGGGTGATGAAGAATACACGTTGCTCTATTCATCGATTAGTGGGGTGCTTGAAGGAGATCATGTGAAGGACAAAATTAAAGCGTTTATGGATCCTTCTCTGAGGCGCCAGTATCCTTTGGAGCTGGCGTTTTCAATGGCTCAGATAGCTAGGTGCTGCGTTGCGCCTCAGATCAACTCACGACCCACCATGGCTCAAGCTTGTGGTACTCTATCTAAGATTCTTTCATCAACTCTCGACTGGGATTCATCTGAAGCTGTGGATCTTGAACATTCAAGGTCTCTGAGTCATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009719 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

673

Amino Acids

72.95

Weight (kDa)

6.62

Isoelectric Point (pI)

45.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	52 - 108	7.2e-18	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	112 - 166	1.2e-25	LYK3/4/5 LysM2 domain
LysM2_NFP	PF23457	113 - 165	7.1e-08	NFP LysM2 domain
LysM3_LYK4_5	PF23473	181 - 230	5.9e-12	LYK4/5 LysM3 domain
Pkinase	PF00069	384 - 641	3.2e-34	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	393 - 640	3.8e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33580
fragaria_vesca	FvH4_5g26710 FvH4_5g26740
prunus_persica	Prupe.5G001000_v2.0.a1
pyrus_communis	pycom16g26340
rosa_chinensis	RchiOBHm_Chr7g0217591 RchiOBHm_Chr7g0217601
rosa_laevigata	RLG00000002457 RLG00000002458
rosa_multiflora	Rmu_co8386267.1_g000001 Rmu_sc0006161.1_g000002 Rmu_ssc0000225.1_g000002
rosa_roxburghii	Rroxscaffold_3G00241810 Rroxscaffold_3G00241840
rosa_rugosa	Rorug07G0170300 Rorug07G0170300
rosa_samantha	Rh7AG310400 Rh7BG301700 Rh7CG329400 Rh7DG309800 Rh7DG310500
rosa_wichuraiana	Rw7G026310 Rw7G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	296, 909
AatII	GACGTC	2 cut(s)	273, 657
AbsI	CCTCGAGG	1 cut(s)	464
Acc36I	ACCTGC	2 cut(s)	552, 1104
AccB1I	GGYRCC	4 cut(s)	143, 921, 1624, 1824
AccB7I	CCANNNNNTGG	1 cut(s)	800
AccBSI	CCGCTC	2 cut(s)	149, 180
AccI	GTMKAC	3 cut(s)	273, 1221, 1311
AccIII	TCCGGA	1 cut(s)	1706
AclWI	GGATC	6 cut(s)	542, 830, 1253, 1805, 1818, 1989
AcoI	YGGCCR	1 cut(s)	1413
AcuI	CTGAAG	4 cut(s)	383, 737, 1138, 1992
AcyI	GRCGYC	8 cut(s)	144, 270, 654, 834, 840, 907, 1625, 1825
AdeI	CACNNNGTG	1 cut(s)	800
AfaI	GTAC	5 cut(s)	542, 612, 1609, 1634, 1927
AfiI	CCNNNNNNNGG	3 cut(s)	800, 1047, 1721
AflIII	ACRYGT	2 cut(s)	1597, 1737
AgsI	TTSAA	8 cut(s)	713, 1120, 1357, 1586, 1772, 1854, 1988, 1995
AjiI	CACGTC	1 cut(s)	1411
AjnI	CCWGG	2 cut(s)	405, 1491
AjuI	GAANNNNNNNTTGG	2 cut(s)	790, 822
Alw21I	GWGCWC	1 cut(s)	953
Alw26I	GTCTC	5 cut(s)	43, 355, 860, 1588, 2004
AlwI	GGATC	6 cut(s)	542, 830, 1253, 1805, 1818, 1989
Ama87I	CYCGRG	1 cut(s)	464
Aor13HI	TCCGGA	1 cut(s)	1706
AoxI	GGCC	6 cut(s)	328, 409, 426, 472, 549, 1413
ApeKI	GCWGC	4 cut(s)	67, 1181, 1322, 1875
ArsI	GACNNNNNNTTYG	2 cut(s)	365, 397
AseI	ATTAAT	1 cut(s)	1457
AspLEI	GCGC	7 cut(s)	146, 161, 784, 1423, 1627, 1827, 1885
AspS9I	GGNCC	3 cut(s)	329, 409, 427
AsuC2I	CCSGG	1 cut(s)	532
AsuHPI	GGTGA	7 cut(s)	112, 406, 768, 783, 1204, 1660, 1736
AsuII	TTCGAA	1 cut(s)	1089
AvaI	CYCGRG	1 cut(s)	464
AxyI	CCTNAGG	1 cut(s)	431
BaeI	ACNNNNGTAYC	2 cut(s)	704, 737
BalI	TGGCCA	1 cut(s)	1415
BamHI	GGATCC	1 cut(s)	1810
BanI	GGYRCC	4 cut(s)	143, 921, 1624, 1824
BanII	GRGCYC	1 cut(s)	953
BbsI	GAAGAC	3 cut(s)	1098, 1144, 1717
Bbv12I	GWGCWC	1 cut(s)	953
BbvI	GCAGC	4 cut(s)	79, 1168, 1309, 1862
BccI	CCATC	4 cut(s)	191, 244, 287, 1562
BceAI	ACGGC	6 cut(s)	157, 587, 754, 894, 1169, 1186
BcgI	CGANNNNNNTGC	4 cut(s)	1163, 1197, 1304, 1338
BciT130I	CCWGG	2 cut(s)	407, 1493
BciVI	GTATCC	2 cut(s)	732, 1842
BcnI	CCSGG	1 cut(s)	532
BcoDI	GTCTC	5 cut(s)	43, 355, 860, 1588, 2004
BfaI	CTAG	3 cut(s)	47, 680, 1869
BfmI	CTRYAG	1 cut(s)	1097
BfoI	RGCGCY	4 cut(s)	147, 785, 1628, 1828
BfuAI	ACCTGC	2 cut(s)	552, 1104
BfuI	GTATCC	2 cut(s)	732, 1842
Bme1390I	CCNGG	3 cut(s)	407, 532, 1493
BmeT110I	CYCGRG	1 cut(s)	464
BmgBI	CACGTC	1 cut(s)	1411
BmgT120I	GGNCC	3 cut(s)	329, 409, 427
BmiI	GGNNCC	8 cut(s)	145, 229, 331, 923, 1144, 1626, 1812, 1826
BmrFI	CCNGG	3 cut(s)	407, 532, 1493
BmrI	ACTGGG	1 cut(s)	1969
BmsI	GCATC	4 cut(s)	6, 445, 1168, 1486
BmuI	ACTGGG	1 cut(s)	1969
BpiI	GAAGAC	3 cut(s)	1098, 1144, 1717
Bpu14I	TTCGAA	1 cut(s)	1089
BpuEI	CTTGAG	2 cut(s)	1525, 1899
BpuMI	CCSGG	1 cut(s)	532
Bsa29I	ATCGAT	1 cut(s)	1754
BsaBI	GATNNNNATC	1 cut(s)	827
BsaHI	GRCGYC	8 cut(s)	144, 270, 654, 834, 840, 907, 1625, 1825
BsaI	GGTCTC	2 cut(s)	43, 2004
BsaJI	CCNNGG	5 cut(s)	223, 406, 1512, 1719, 1908
BsaWI	WCCGGW	2 cut(s)	953, 1706
Bsc4I	CCNNNNNNNGG	3 cut(s)	800, 1047, 1721
Bse118I	RCCGGY	3 cut(s)	125, 918, 1139
Bse1I	ACTGG	3 cut(s)	1668, 1828, 1964
Bse21I	CCTNAGG	1 cut(s)	431
Bse3DI	GCAATG	1 cut(s)	1398
Bse8I	GATNNNNATC	1 cut(s)	827
BseAI	TCCGGA	1 cut(s)	1706
BseBI	CCWGG	2 cut(s)	407, 1493
BseCI	ATCGAT	1 cut(s)	1754
BseDI	CCNNGG	5 cut(s)	223, 406, 1512, 1719, 1908
BseGI	GGATG	4 cut(s)	236, 279, 1501, 1672
BseJI	GATNNNNATC	1 cut(s)	827
BseLI	CCNNNNNNNGG	3 cut(s)	800, 1047, 1721
BseMI	GCAATG	1 cut(s)	1398
BseMII	CTCAG	6 cut(s)	445, 1287, 1811, 1874, 1901, 1994
BseNI	ACTGG	3 cut(s)	1668, 1828, 1964
BseXI	GCAGC	4 cut(s)	79, 1168, 1309, 1862
BseYI	CCCAGC	1 cut(s)	339
BshFI	GGCC	6 cut(s)	330, 411, 428, 474, 551, 1415
BshNI	GGYRCC	4 cut(s)	143, 921, 1624, 1824
BshVI	ATCGAT	1 cut(s)	1754
BsiHKAI	GWGCWC	1 cut(s)	953
BsiHKCI	CYCGRG	1 cut(s)	464
BsiSI	CCGG	8 cut(s)	126, 327, 531, 919, 954, 1140, 1628, 1707
BslFI	GGGAC	2 cut(s)	290, 1195
BslI	CCNNNNNNNGG	3 cut(s)	800, 1047, 1721
BsmAI	GTCTC	5 cut(s)	43, 355, 860, 1588, 2004
BsmBI	CGTCTC	1 cut(s)	355
BsmFI	GGGAC	2 cut(s)	290, 1195
BsnI	GGCC	6 cut(s)	330, 411, 428, 474, 551, 1415
Bso31I	GGTCTC	2 cut(s)	43, 2004
BsoBI	CYCGRG	1 cut(s)	464
Bsp119I	TTCGAA	1 cut(s)	1089
Bsp1286I	GDGCHC	1 cut(s)	953
Bsp13I	TCCGGA	1 cut(s)	1706
Bsp19I	CCATGG	1 cut(s)	1908
BspANI	GGCC	6 cut(s)	330, 411, 428, 474, 551, 1415
BspCNI	CTCAG	6 cut(s)	444, 1286, 1812, 1873, 1900, 1995
BspDI	ATCGAT	1 cut(s)	1754
BspEI	TCCGGA	1 cut(s)	1706
BspLI	GGNNCC	8 cut(s)	145, 229, 331, 923, 1144, 1626, 1812, 1826
BspMAI	CTGCAG	1 cut(s)	1101
BspMI	ACCTGC	2 cut(s)	552, 1104
BspPI	GGATC	6 cut(s)	542, 830, 1253, 1805, 1818, 1989
BspT104I	TTCGAA	1 cut(s)	1089
BspT107I	GGYRCC	4 cut(s)	143, 921, 1624, 1824
BspTNI	GGTCTC	2 cut(s)	43, 2004
BsrBI	CCGCTC	2 cut(s)	149, 180
BsrDI	GCAATG	1 cut(s)	1398
BsrFI	RCCGGY	3 cut(s)	125, 918, 1139
BsrI	ACTGG	3 cut(s)	1668, 1828, 1964
BssAI	RCCGGY	3 cut(s)	125, 918, 1139
BssECI	CCNNGG	5 cut(s)	223, 406, 1512, 1719, 1908
BssNI	GRCGYC	8 cut(s)	144, 270, 654, 834, 840, 907, 1625, 1825
BssT1I	CCWWGG	3 cut(s)	1512, 1719, 1908
Bst2UI	CCWGG	2 cut(s)	407, 1493
Bst6I	CTCTTC	3 cut(s)	48, 714, 893
BstACI	GRCGYC	8 cut(s)	144, 270, 654, 834, 840, 907, 1625, 1825
BstAPI	GCANNNNNTGC	1 cut(s)	16
BstBI	TTCGAA	1 cut(s)	1089
BstC8I	GCNNGC	6 cut(s)	127, 505, 549, 850, 1141, 1845
BstDEI	CTNAG	7 cut(s)	431, 1273, 1820, 1860, 1887, 1935, 2003
BstDSI	CCRYGG	1 cut(s)	1908
BstF5I	GGATG	4 cut(s)	236, 279, 1501, 1672
BstH2I	RGCGCY	4 cut(s)	147, 785, 1628, 1828
BstHHI	GCGC	7 cut(s)	146, 161, 784, 1423, 1627, 1827, 1885
BstMAI	GTCTC	5 cut(s)	43, 355, 860, 1588, 2004
BstMWI	GCNNNNNNNGC	7 cut(s)	16, 67, 135, 186, 973, 1517, 1865
BstNI	CCWGG	2 cut(s)	407, 1493
BstNSI	RCATGY	1 cut(s)	1601
BstSCI	CCNGG	3 cut(s)	405, 530, 1491
BstSFI	CTRYAG	1 cut(s)	1097
BstV1I	GCAGC	4 cut(s)	79, 1168, 1309, 1862
BstV2I	GAAGAC	3 cut(s)	1098, 1144, 1717
BstX2I	RGATCY	3 cut(s)	822, 1810, 1981
BstXI	CCANNNNNNTGG	1 cut(s)	1411
BstYI	RGATCY	3 cut(s)	822, 1810, 1981
Bsu15I	ATCGAT	1 cut(s)	1754
Bsu36I	CCTNAGG	1 cut(s)	431
BsuI	GTATCC	2 cut(s)	732, 1842
BsuRI	GGCC	6 cut(s)	330, 411, 428, 474, 551, 1415
BsuTUI	ATCGAT	1 cut(s)	1754
BtgI	CCRYGG	1 cut(s)	1908
BtgZI	GCGATG	2 cut(s)	229, 373
BtrI	CACGTC	1 cut(s)	1411
BtsCI	GGATG	4 cut(s)	236, 279, 1501, 1672
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	1 cut(s)	1068
BveI	ACCTGC	2 cut(s)	552, 1104
Cac8I	GCNNGC	6 cut(s)	127, 505, 549, 850, 1141, 1845
CfoI	GCGC	7 cut(s)	146, 161, 784, 1423, 1627, 1827, 1885
Cfr10I	RCCGGY	3 cut(s)	125, 918, 1139
Cfr13I	GGNCC	3 cut(s)	329, 409, 427
ClaI	ATCGAT	1 cut(s)	1754
CseI	GACGC	4 cut(s)	823, 829, 915, 1273
Csp6I	GTAC	5 cut(s)	541, 611, 1608, 1633, 1926
CspCI	CAANNNNNGTGG	2 cut(s)	1524, 1559
CviAII	CATG	9 cut(s)	62, 156, 1380, 1598, 1621, 1636, 1781, 1909, 2009
CviQI	GTAC	5 cut(s)	541, 611, 1608, 1633, 1926
DdeI	CTNAG	7 cut(s)	431, 1273, 1820, 1860, 1887, 1935, 2003
DinI	GGCGCC	3 cut(s)	145, 1626, 1826
DraIII	CACNNNGTG	1 cut(s)	800
DrdI	GACNNNNNNGTC	2 cut(s)	296, 909
DseDI	GACNNNNNNGTC	2 cut(s)	296, 909
EaeI	YGGCCR	1 cut(s)	1413
Eam1104I	CTCTTC	3 cut(s)	48, 714, 893
EarI	CTCTTC	3 cut(s)	48, 714, 893
EciI	GGCGGA	1 cut(s)	732
Ecl136II	GAGCTC	1 cut(s)	951
Eco130I	CCWWGG	3 cut(s)	1512, 1719, 1908
Eco24I	GRGCYC	1 cut(s)	953
Eco31I	GGTCTC	2 cut(s)	43, 2004
Eco53kI	GAGCTC	1 cut(s)	951
Eco57I	CTGAAG	4 cut(s)	383, 737, 1138, 1992
Eco81I	CCTNAGG	1 cut(s)	431
Eco88I	CYCGRG	1 cut(s)	464
EcoICRI	GAGCTC	1 cut(s)	951
EcoO109I	RGGNCCY	2 cut(s)	409, 427
EcoRII	CCWGG	2 cut(s)	405, 1491
EcoT14I	CCWWGG	3 cut(s)	1512, 1719, 1908
EcoT38I	GRGCYC	1 cut(s)	953
EgeI	GGCGCC	3 cut(s)	145, 1626, 1826
EheI	GGCGCC	3 cut(s)	145, 1626, 1826
ErhI	CCWWGG	3 cut(s)	1512, 1719, 1908
Esp3I	CGTCTC	1 cut(s)	355
FaeI	CATG	9 cut(s)	65, 159, 1383, 1601, 1624, 1639, 1784, 1912, 2012
FalI	AAGNNNNNCTT	4 cut(s)	790, 822, 809, 841
FaqI	GGGAC	2 cut(s)	290, 1195
FatI	CATG	9 cut(s)	61, 155, 1379, 1597, 1620, 1635, 1780, 1908, 2008
FblI	GTMKAC	3 cut(s)	273, 1221, 1311
FokI	GGATG	4 cut(s)	223, 266, 1508, 1679
FriOI	GRGCYC	1 cut(s)	953
FspBI	CTAG	3 cut(s)	47, 680, 1869
GlaI	GCGC	7 cut(s)	145, 160, 783, 1422, 1626, 1826, 1884
GsaI	CCCAGC	1 cut(s)	343
HaeII	RGCGCY	4 cut(s)	147, 785, 1628, 1828
HaeIII	GGCC	6 cut(s)	330, 411, 428, 474, 551, 1415
HapII	CCGG	8 cut(s)	126, 327, 531, 919, 954, 1140, 1628, 1707
HgaI	GACGC	4 cut(s)	823, 829, 915, 1273
HhaI	GCGC	7 cut(s)	146, 161, 784, 1423, 1627, 1827, 1885
Hin1I	GRCGYC	8 cut(s)	144, 270, 654, 834, 840, 907, 1625, 1825
Hin1II	CATG	9 cut(s)	65, 159, 1383, 1601, 1624, 1639, 1784, 1912, 2012
Hin6I	GCGC	7 cut(s)	144, 159, 782, 1421, 1625, 1825, 1883
HinP1I	GCGC	7 cut(s)	144, 159, 782, 1421, 1625, 1825, 1883
HincII	GTYRAC	2 cut(s)	274, 1222
HindII	GTYRAC	2 cut(s)	274, 1222
HindIII	AAGCTT	1 cut(s)	1917
HinfI	GANTC	7 cut(s)	110, 1067, 1134, 1278, 1939, 1964, 2005
HpaII	CCGG	8 cut(s)	126, 327, 531, 919, 954, 1140, 1628, 1707
HphI	GGTGA	7 cut(s)	112, 406, 768, 783, 1204, 1660, 1736
Hpy166II	GTNNAC	6 cut(s)	274, 1222, 1288, 1312, 1396, 1610
Hpy188III	TCNNGA	6 cut(s)	578, 1275, 1707, 1899, 1955, 1985
Hpy8I	GTNNAC	6 cut(s)	274, 1222, 1288, 1312, 1396, 1610
HpyAV	CCTTC	8 cut(s)	711, 756, 892, 1351, 1549, 1766, 1780, 1824
HpyCH4IV	ACGT	6 cut(s)	168, 270, 348, 654, 1410, 1739
HpyCH4V	TGCA	7 cut(s)	10, 53, 61, 138, 1099, 1499, 1676
HpyF10VI	GCNNNNNNNGC	7 cut(s)	16, 67, 135, 186, 973, 1517, 1865
HpyF3I	CTNAG	7 cut(s)	431, 1273, 1820, 1860, 1887, 1935, 2003
HpySE526I	ACGT	6 cut(s)	168, 270, 348, 654, 1410, 1739
Hsp92I	GRCGYC	8 cut(s)	144, 270, 654, 834, 840, 907, 1625, 1825
Hsp92II	CATG	9 cut(s)	65, 159, 1383, 1601, 1624, 1639, 1784, 1912, 2012
HspAI	GCGC	7 cut(s)	144, 159, 782, 1421, 1625, 1825, 1883
KasI	GGCGCC	3 cut(s)	143, 1624, 1824
Kpn2I	TCCGGA	1 cut(s)	1706
KroI	GCCGGC	2 cut(s)	125, 1139
KroNI	GCCGGC	2 cut(s)	127, 1141
Lsp1109I	GCAGC	4 cut(s)	79, 1168, 1309, 1862
LweI	GCATC	4 cut(s)	6, 445, 1168, 1486
MaeI	CTAG	3 cut(s)	47, 680, 1869
MaeII	ACGT	6 cut(s)	168, 270, 348, 654, 1410, 1739
MaeIII	GTNAC	1 cut(s)	169
MbiI	CCGCTC	2 cut(s)	149, 180
MflI	RGATCY	3 cut(s)	822, 1810, 1981
MhlI	GDGCHC	1 cut(s)	953
MlsI	TGGCCA	1 cut(s)	1415
MluCI	AATT	4 cut(s)	941, 1112, 1522, 1794
MluNI	TGGCCA	1 cut(s)	1415
Mly113I	GGCGCC	3 cut(s)	144, 1625, 1825
MlyI	GAGTC	3 cut(s)	104, 1076, 2014
MmeI	TCCRAC	9 cut(s)	138, 264, 291, 672, 823, 834, 1032, 1281, 1674
Mox20I	TGGCCA	1 cut(s)	1415
MroI	TCCGGA	1 cut(s)	1706
MroNI	GCCGGC	2 cut(s)	125, 1139
MscI	TGGCCA	1 cut(s)	1415
MseI	TTAA	7 cut(s)	23, 639, 944, 1053, 1188, 1457, 1797
MslI	CAYNNNNRTG	1 cut(s)	485
Msp20I	TGGCCA	1 cut(s)	1415
MspI	CCGG	8 cut(s)	126, 327, 531, 919, 954, 1140, 1628, 1707
MspR9I	CCNGG	3 cut(s)	407, 532, 1493
MvaI	CCWGG	2 cut(s)	407, 1493
MwoI	GCNNNNNNNGC	7 cut(s)	16, 67, 135, 186, 973, 1517, 1865
NaeI	GCCGGC	2 cut(s)	127, 1141
NarI	GGCGCC	3 cut(s)	144, 1625, 1825
NciI	CCSGG	1 cut(s)	532
NcoI	CCATGG	1 cut(s)	1908
NgoMIV	GCCGGC	2 cut(s)	125, 1139
NlaIII	CATG	9 cut(s)	65, 159, 1383, 1601, 1624, 1639, 1784, 1912, 2012
NlaIV	GGNNCC	8 cut(s)	145, 229, 331, 923, 1144, 1626, 1812, 1826
NmeAIII	GCCGAG	1 cut(s)	204
NmuCI	GTSAC	1 cut(s)	169
NspI	RCATGY	1 cut(s)	1601
NspV	TTCGAA	1 cut(s)	1089
PaeR7I	CTCGAG	1 cut(s)	464
PciI	ACATGT	1 cut(s)	1597
PcsI	WCGNNNNNNNCGW	4 cut(s)	567, 576, 837, 907
PdiI	GCCGGC	2 cut(s)	127, 1141
PfeI	GAWTC	4 cut(s)	1134, 1278, 1939, 1964
PflFI	GACNNNGTC	2 cut(s)	653, 909
PflMI	CCANNNNNTGG	1 cut(s)	800
PfoI	TCCNGGA	1 cut(s)	1491
PleI	GAGTC	3 cut(s)	104, 1075, 2013
PluTI	GGCGCC	3 cut(s)	147, 1628, 1828
PpsI	GAGTC	3 cut(s)	104, 1075, 2013
PscI	ACATGT	1 cut(s)	1597
PshBI	ATTAAT	1 cut(s)	1457
Psp124BI	GAGCTC	1 cut(s)	953
Psp6I	CCWGG	2 cut(s)	405, 1491
PspFI	CCCAGC	1 cut(s)	339
PspGI	CCWGG	2 cut(s)	405, 1491
PspN4I	GGNNCC	8 cut(s)	145, 229, 331, 923, 1144, 1626, 1812, 1826
PspPI	GGNCC	3 cut(s)	329, 409, 427
PspXI	VCTCGAGB	1 cut(s)	464
PstI	CTGCAG	1 cut(s)	1101
PsuI	RGATCY	3 cut(s)	822, 1810, 1981
PsyI	GACNNNGTC	2 cut(s)	653, 909
RsaI	GTAC	5 cut(s)	542, 612, 1609, 1634, 1927
RsaNI	GTAC	5 cut(s)	541, 611, 1608, 1633, 1926
RseI	CAYNNNNRTG	1 cut(s)	485
SacI	GAGCTC	1 cut(s)	953
SalI	GTCGAC	2 cut(s)	272, 1220
SaqAI	TTAA	7 cut(s)	23, 639, 944, 1053, 1188, 1457, 1797
Sau96I	GGNCC	3 cut(s)	329, 409, 427
SchI	GAGTC	3 cut(s)	104, 1076, 2014
ScrFI	CCNGG	3 cut(s)	407, 532, 1493
SduI	GDGCHC	1 cut(s)	953
SfaNI	GCATC	4 cut(s)	6, 445, 1168, 1486
SfcI	CTRYAG	1 cut(s)	1097
SfoI	GGCGCC	3 cut(s)	145, 1626, 1826
Sfr274I	CTCGAG	1 cut(s)	464
SfuI	TTCGAA	1 cut(s)	1089
SlaI	CTCGAG	1 cut(s)	464
SmiMI	CAYNNNNRTG	1 cut(s)	485
SmlI	CTYRAG	3 cut(s)	464, 1504, 1914
SmoI	CTYRAG	3 cut(s)	464, 1504, 1914
Sse9I	AATT	4 cut(s)	941, 1112, 1522, 1794
SspDI	GGCGCC	3 cut(s)	143, 1624, 1824
SspMI	CTAG	3 cut(s)	47, 680, 1869
SstI	GAGCTC	1 cut(s)	953
StyD4I	CCNGG	3 cut(s)	405, 530, 1491
StyI	CCWWGG	3 cut(s)	1512, 1719, 1908
TaiI	ACGT	6 cut(s)	171, 273, 351, 657, 1413, 1742
TaqII	GACCGA	1 cut(s)	1517
TasI	AATT	4 cut(s)	941, 1112, 1522, 1794
TatI	WGTACW	1 cut(s)	1632
TauI	GCSGC	6 cut(s)	149, 251, 254, 474, 530, 769
TfiI	GAWTC	4 cut(s)	1134, 1278, 1939, 1964
Tru1I	TTAA	7 cut(s)	23, 639, 944, 1053, 1188, 1457, 1797
Tru9I	TTAA	7 cut(s)	23, 639, 944, 1053, 1188, 1457, 1797
TscAI	CASTG	1 cut(s)	1068
TseFI	GTSAC	1 cut(s)	169
TseI	GCWGC	4 cut(s)	67, 1181, 1322, 1875
Tsp45I	GTSAC	1 cut(s)	169
TspDTI	ATGAA	6 cut(s)	17, 817, 1740, 1743, 1935, 1956
TspGWI	ACGGA	3 cut(s)	286, 1138, 1207
TspRI	CASTG	1 cut(s)	1068
Tth111I	GACNNNGTC	2 cut(s)	653, 909
Van91I	CCANNNNNTGG	1 cut(s)	800
VspI	ATTAAT	1 cut(s)	1457
XceI	RCATGY	1 cut(s)	1601
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1528
XhoI	CTCGAG	1 cut(s)	464
XmiI	GTMKAC	3 cut(s)	273, 1221, 1311
XspI	CTAG	3 cut(s)	47, 680, 1869
ZraI	GACGTC	2 cut(s)	271, 655

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.