Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0008355

Physical Location & Seq

Genomic Coordinates Forward (+)

34040986 .. 34042960

Gene Structure 1975 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGAAGATGAAGCTGCTAACGTTAATGGTGGTCTCTGTTCTACTAGTTGCAGCTGTGCATGGGCAGCAGACCTACCTAGCCAACAAGCAGCTCGACTGCTACAACAACTACAACTCCACCGACGGCTACGTCTGCAACGGCGCCTCCCCCTCTTGCATCTCCTACCTCACTTTCCGCTCCATCGACCCTCTCTACAACTCCCCAACCTCCATCGCCTACCTCCTCAGCTCCACCCCCTCCGAAATCGCCTCCGCCAACAACATCTCCGACGTCGCCCCCATCCCTGCCGACACCCTCGTCCTCATCCCCGTCAACTGCTCCTGCTCCGGCAACTACTCCCAGCACAACGCCTCCTACACCCTCAAGACCGCCGACGACACTTACTTCGGCGTCGCCAACAACACCTACCAGGGCCTCACCACCTGTCAGTCCCTCATGCACCAGAACGCTTACGGCGACCGAAACCTCACCGTCAACCTCACCTTGGAAGTCCCCGTCAGATGCGCCTGCCCCACCGCCGCCCAGGCCGCCGCCGGCATCAACTACCTGCTCGTCTACCTAGTCACGTGGGCCGACACAATTGAAGCAATCGCTCAACGCTTCGGCGTAGATGAGTCCACCTTGCTCGCAGCCAACGACCTGTCGCCCACCGACCTCATCTATCCCTTCACGCCCTTACTGGTTCCTCTCAAAACCAAACCTTCCCCTCTTCAACTGCAGCTCCCAACCTCACCTCCTCCGTCTCCGTCTCCGCCGCCTCCTCCCCGCCGAGTGGCGGCTCTTCCAACAACAAGTGGGTCTTCATCGGCGTCGGCATTGGAGCTGGTTGTCTCCTCCTCCTCACCGCCCTCGCCGCCTTCCTCTTCTTATCAAAACGACGCCGCCGTCAGCTCCGCCAATCTCCCAAACCTAACTTGCGTCCAAAGAGCTCCGAGGGCCACCCAATTCTTCAGCGAGTCCAACAGAATCAACGGCTCCTCCGTTTTCAGAGCAACCTTCGACGGCGACGAAGCCGCCGTCAAGGTGATGACAGGCGACGTGGCACTCTCCGGCGACGAGATCAACATTCTGAAGCGGATCAATCACTCCAACATTATCAGACTCTCTGGATTCTGCGTCCACCAAGGAAACACTTACCTCGTCTACGAGTTCGCTCCTTCTGGCTCACTCATTGATTGTCTTCATAAGGGCTCCATTAGTCCTCTGTCATGGAAGCAGAGAGTTCAGATTGCTAGTGACGTGGCCACTGCGCTCAACTATCTACACAATTTCACAGAGCCTCCATTAATCCACAAGAACCTCAACAGCAGCAACATTCTCCTGGATGCAAACTTGAGAGCCAAGGTTGCCAATTTTGGTCTGGCAAGAGCTGTCGAGTTGGATAACGAAGACGAAGATGGAGAACAGGGATTTCAACAGACGAGGCACGTGGTGGGTACGAGGGGCTACATGGCGCCGGAGTACATTGAAAACGGAGTGATCACTCCGAAGCTCGATGTGTTTGCATTTGGGGTTGTTTTGTTGGAGCTCTTGTCTGGAAGACGAGCCTCAGGTGATGACGAGCACACATTGCTGTGTGAGTCCATTAGTGGGGTGCTTGAAGGAGATGATGTGAGGGACAAAATTAAAGAGTTTATGGATCCTTCTCTGAAAAGCGAGTACCCTTTGGACCTGGCGTTTTCGATGGCTCAACTCGCTAAGAGCTGCGTTGCGCCTCAGATCAACTGTCGACCCACAATGGCTCAAGCTTCTGGGACTCTATCGAAGATTCTTTCGTCGACTCTAGACTGGGATCCATCTGATGCTGAGGATCTTAGAGATTCAAGGTCAATGAGTTATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009719 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

615

Amino Acids

66.3

Weight (kDa)

5.04

Isoelectric Point (pI)

50.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	51 - 108	1.9e-18	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	112 - 167	1.5e-24	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	182 - 230	1.5e-21	LYK4/5 LysM3 domain
LysM	PF01476	191 - 229	3e-08	LysM domain
Pkinase	PF00069	327 - 583	1.4e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	351 - 583	6.5e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33580
fragaria_vesca	FvH4_5g26710 FvH4_5g26740
prunus_persica	Prupe.5G001000_v2.0.a1
pyrus_communis	pycom16g26340
rosa_chinensis	RchiOBHm_Chr7g0217591 RchiOBHm_Chr7g0217601
rosa_laevigata	RLG00000002457 RLG00000002458
rosa_multiflora	Rmu_co8386267.1_g000001 Rmu_sc0006161.1_g000002 Rmu_ssc0000225.1_g000002
rosa_roxburghii	Rroxscaffold_3G00241810 Rroxscaffold_3G00241840
rosa_rugosa	Rorug07G0170300 Rorug07G0170300
rosa_samantha	Rh7AG310400 Rh7BG301700 Rh7CG329400 Rh7DG309800 Rh7DG310500
rosa_wichuraiana	Rw7G026310 Rw7G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	128, 296, 884
AatII	GACGTC	1 cut(s)	273
Acc36I	ACCTGC	1 cut(s)	555
AccB1I	GGYRCC	2 cut(s)	140, 1453
AccBSI	CCGCTC	1 cut(s)	177
AccI	GTMKAC	4 cut(s)	555, 1143, 1729, 1778
AclI	AACGTT	1 cut(s)	20
AclWI	GGATC	6 cut(s)	1085, 1634, 1647, 1787, 1800, 1818
AcoI	YGGCCR	1 cut(s)	1242
AcuI	CTGAAG	2 cut(s)	934, 1091
AcvI	CACGTG	2 cut(s)	567, 1429
AcyI	GRCGYC	6 cut(s)	141, 270, 390, 809, 879, 1454
AdeI	CACNNNGTG	1 cut(s)	1432
AfaI	GTAC	3 cut(s)	1438, 1463, 1661
AfiI	CCNNNNNNNGG	4 cut(s)	484, 772, 775, 1590
AgsI	TTSAA	6 cut(s)	584, 713, 1415, 1469, 1601, 1824
AhlI	ACTAGT	1 cut(s)	43
AjiI	CACGTC	2 cut(s)	1039, 1240
AjnI	CCWGG	4 cut(s)	408, 522, 1320, 1671
Alw21I	GWGCWC	3 cut(s)	931, 1530, 1566
Alw26I	GTCTC	4 cut(s)	37, 747, 753, 835
AlwI	GGATC	6 cut(s)	1085, 1634, 1647, 1787, 1800, 1818
AoxI	GGCC	5 cut(s)	412, 525, 570, 936, 1242
ApeKI	GCWGC	8 cut(s)	13, 50, 64, 88, 629, 718, 1308, 1704
ArsI	GACNNNNNNTTYG	4 cut(s)	368, 400, 1002, 1034
AseI	ATTAAT	1 cut(s)	1286
AspLEI	GCGC	5 cut(s)	143, 506, 1252, 1456, 1714
AspS9I	GGNCC	4 cut(s)	412, 570, 936, 1669
AsuHPI	GGTGA	7 cut(s)	409, 460, 472, 723, 834, 1036, 1565
AvaII	GGWCC	1 cut(s)	1669
AxyI	CCTNAGG	1 cut(s)	1549
BalI	TGGCCA	1 cut(s)	1244
BamHI	GGATCC	2 cut(s)	1639, 1792
BanI	GGYRCC	2 cut(s)	140, 1453
BanII	GRGCYC	3 cut(s)	931, 1193, 1530
BbrPI	CACGTG	2 cut(s)	567, 1429
BbsI	GAAGAC	4 cut(s)	792, 1172, 1395, 1546
Bbv12I	GWGCWC	3 cut(s)	931, 1530, 1566
BbvCI	CCTCAGC	2 cut(s)	224, 1806
BbvI	GCAGC	7 cut(s)	62, 76, 100, 641, 730, 1320, 1691
BccI	CCATC	6 cut(s)	188, 218, 287, 1391, 1678, 1804
BceAI	ACGGC	7 cut(s)	139, 154, 469, 869, 988, 1001, 1018
BcgI	CGANNNNNNTGC	2 cut(s)	1484, 1518
BciT130I	CCWGG	4 cut(s)	410, 524, 1322, 1673
BclI	TGATCA	1 cut(s)	1479
BcoDI	GTCTC	4 cut(s)	37, 747, 753, 835
BcuI	ACTAGT	1 cut(s)	43
BfaI	CTAG	5 cut(s)	44, 77, 560, 1233, 1784
BfmI	CTRYAG	1 cut(s)	716
BfoI	RGCGCY	2 cut(s)	144, 1457
BfuAI	ACCTGC	1 cut(s)	555
BglI	GCCNNNNNGGC	1 cut(s)	524
Bme1390I	CCNGG	4 cut(s)	410, 524, 1322, 1673
Bme18I	GGWCC	1 cut(s)	1669
BmgBI	CACGTC	2 cut(s)	1039, 1240
BmgT120I	GGNCC	4 cut(s)	412, 570, 936, 1669
BmiI	GGNNCC	7 cut(s)	142, 684, 976, 1192, 1455, 1641, 1794
BmrFI	CCNGG	4 cut(s)	410, 524, 1322, 1673
BmrI	ACTGGG	1 cut(s)	1798
BmsI	GCATC	5 cut(s)	165, 491, 546, 1315, 1792
BmuI	ACTGGG	1 cut(s)	1798
BpiI	GAAGAC	4 cut(s)	792, 1172, 1395, 1546
Bpu10I	CCTNAGC	2 cut(s)	224, 1806
BpuEI	CTTGAG	3 cut(s)	347, 1354, 1728
BsaAI	YACGTR	2 cut(s)	567, 1429
BsaHI	GRCGYC	6 cut(s)	141, 270, 390, 809, 879, 1454
BsaI	GGTCTC	1 cut(s)	37
BsaJI	CCNNGG	6 cut(s)	409, 483, 522, 932, 1123, 1341
Bsc4I	CCNNNNNNNGG	4 cut(s)	484, 772, 775, 1590
Bse118I	RCCGGY	1 cut(s)	533
Bse1I	ACTGG	2 cut(s)	684, 1793
Bse21I	CCTNAGG	1 cut(s)	1549
Bse3DI	GCAATG	1 cut(s)	1568
BseBI	CCWGG	4 cut(s)	410, 524, 1322, 1673
BseDI	CCNNGG	6 cut(s)	409, 483, 522, 932, 1123, 1341
BseGI	GGATG	3 cut(s)	279, 303, 1330
BseLI	CCNNNNNNNGG	4 cut(s)	484, 772, 775, 1590
BseMI	GCAATG	1 cut(s)	1568
BseMII	CTCAG	4 cut(s)	238, 1563, 1730, 1797
BseNI	ACTGG	2 cut(s)	684, 1793
BseRI	GAGGAG	7 cut(s)	212, 726, 750, 823, 826, 829, 967
BseXI	GCAGC	7 cut(s)	62, 76, 100, 641, 730, 1320, 1691
BseYI	CCCAGC	1 cut(s)	339
Bsh1285I	CGRYCG	1 cut(s)	460
BshFI	GGCC	5 cut(s)	414, 527, 572, 938, 1244
BshNI	GGYRCC	2 cut(s)	140, 1453
BsiEI	CGRYCG	1 cut(s)	460
BsiHKAI	GWGCWC	3 cut(s)	931, 1530, 1566
BsiSI	CCGG	4 cut(s)	327, 534, 1050, 1457
BslFI	GGGAC	4 cut(s)	415, 476, 1631, 1768
BslI	CCNNNNNNNGG	4 cut(s)	484, 772, 775, 1590
BsmAI	GTCTC	4 cut(s)	37, 747, 753, 835
BsmBI	CGTCTC	2 cut(s)	747, 753
BsmFI	GGGAC	4 cut(s)	415, 476, 1631, 1768
BsnI	GGCC	5 cut(s)	414, 527, 572, 938, 1244
Bso31I	GGTCTC	1 cut(s)	37
Bsp1286I	GDGCHC	4 cut(s)	931, 1193, 1530, 1566
Bsp143I	GATC	7 cut(s)	1059, 1077, 1479, 1639, 1719, 1792, 1810
BspANI	GGCC	5 cut(s)	414, 527, 572, 938, 1244
BspCNI	CTCAG	4 cut(s)	237, 1562, 1729, 1798
BspLI	GGNNCC	7 cut(s)	142, 684, 976, 1192, 1455, 1641, 1794
BspMAI	CTGCAG	1 cut(s)	720
BspMI	ACCTGC	1 cut(s)	555
BspPI	GGATC	6 cut(s)	1085, 1634, 1647, 1787, 1800, 1818
BspQI	GCTCTTC	1 cut(s)	786
BspT107I	GGYRCC	2 cut(s)	140, 1453
BspTNI	GGTCTC	1 cut(s)	37
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	1 cut(s)	1568
BsrFI	RCCGGY	1 cut(s)	533
BsrI	ACTGG	2 cut(s)	684, 1793
BssAI	RCCGGY	1 cut(s)	533
BssECI	CCNNGG	6 cut(s)	409, 483, 522, 932, 1123, 1341
BssMI	GATC	7 cut(s)	1059, 1077, 1479, 1639, 1719, 1792, 1810
BssNI	GRCGYC	6 cut(s)	141, 270, 390, 809, 879, 1454
BssT1I	CCWWGG	3 cut(s)	483, 1123, 1341
Bst2UI	CCWGG	4 cut(s)	410, 524, 1322, 1673
Bst4CI	ACNGT	2 cut(s)	472, 1727
Bst6I	CTCTTC	3 cut(s)	714, 786, 868
BstACI	GRCGYC	6 cut(s)	141, 270, 390, 809, 879, 1454
BstAPI	GCANNNNNTGC	1 cut(s)	1570
BstBAI	YACGTR	2 cut(s)	567, 1429
BstC8I	GCNNGC	3 cut(s)	508, 535, 627
BstDEI	CTNAG	6 cut(s)	224, 1549, 1698, 1716, 1806, 1814
BstF5I	GGATG	3 cut(s)	279, 303, 1330
BstH2I	RGCGCY	2 cut(s)	144, 1457
BstHHI	GCGC	5 cut(s)	143, 506, 1252, 1456, 1714
BstKTI	GATC	7 cut(s)	1062, 1080, 1482, 1642, 1722, 1795, 1813
BstMAI	GTCTC	4 cut(s)	37, 747, 753, 835
BstMBI	GATC	7 cut(s)	1059, 1077, 1479, 1639, 1719, 1792, 1810
BstMCI	CGRYCG	1 cut(s)	460
BstMWI	GCNNNNNNNGC	9 cut(s)	64, 132, 524, 527, 853, 935, 1346, 1570, 1694
BstNI	CCWGG	4 cut(s)	410, 524, 1322, 1673
BstSCI	CCNGG	4 cut(s)	408, 522, 1320, 1671
BstSFI	CTRYAG	1 cut(s)	716
BstV1I	GCAGC	7 cut(s)	62, 76, 100, 641, 730, 1320, 1691
BstV2I	GAAGAC	4 cut(s)	792, 1172, 1395, 1546
BstX2I	RGATCY	3 cut(s)	1639, 1792, 1810
BstYI	RGATCY	3 cut(s)	1639, 1792, 1810
Bsu36I	CCTNAGG	1 cut(s)	1549
BsuRI	GGCC	5 cut(s)	414, 527, 572, 938, 1244
BtgZI	GCGATG	1 cut(s)	196
BtrI	CACGTC	2 cut(s)	1039, 1240
BtsCI	GGATG	3 cut(s)	279, 303, 1330
BtsI	GCAGTG	1 cut(s)	1245
BtsIMutI	CAGTG	1 cut(s)	1245
BveI	ACCTGC	1 cut(s)	555
Cac8I	GCNNGC	3 cut(s)	508, 535, 627
CfoI	GCGC	5 cut(s)	143, 506, 1252, 1456, 1714
Cfr10I	RCCGGY	1 cut(s)	533
Cfr13I	GGNCC	4 cut(s)	412, 570, 936, 1669
CseI	GACGC	5 cut(s)	379, 798, 887, 907, 1105
Csp6I	GTAC	3 cut(s)	1437, 1462, 1660
CviAII	CATG	4 cut(s)	59, 436, 1209, 1450
CviQI	GTAC	3 cut(s)	1437, 1462, 1660
DdeI	CTNAG	6 cut(s)	224, 1549, 1698, 1716, 1806, 1814
DinI	GGCGCC	2 cut(s)	142, 1455
DpnI	GATC	7 cut(s)	1061, 1079, 1481, 1641, 1721, 1794, 1812
DpnII	GATC	7 cut(s)	1059, 1077, 1479, 1639, 1719, 1792, 1810
DraIII	CACNNNGTG	1 cut(s)	1432
DrdI	GACNNNNNNGTC	3 cut(s)	128, 296, 884
DseDI	GACNNNNNNGTC	3 cut(s)	128, 296, 884
EaeI	YGGCCR	1 cut(s)	1242
Eam1104I	CTCTTC	3 cut(s)	714, 786, 868
EarI	CTCTTC	3 cut(s)	714, 786, 868
EciI	GGCGGA	3 cut(s)	241, 741, 883
Ecl136II	GAGCTC	2 cut(s)	929, 1528
Eco130I	CCWWGG	3 cut(s)	483, 1123, 1341
Eco24I	GRGCYC	3 cut(s)	931, 1193, 1530
Eco31I	GGTCTC	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	1669
Eco53kI	GAGCTC	2 cut(s)	929, 1528
Eco57I	CTGAAG	2 cut(s)	934, 1091
Eco72I	CACGTG	2 cut(s)	567, 1429
Eco81I	CCTNAGG	1 cut(s)	1549
EcoICRI	GAGCTC	2 cut(s)	929, 1528
EcoO109I	RGGNCCY	1 cut(s)	412
EcoRII	CCWGG	4 cut(s)	408, 522, 1320, 1671
EcoT14I	CCWWGG	3 cut(s)	483, 1123, 1341
EcoT38I	GRGCYC	3 cut(s)	931, 1193, 1530
EgeI	GGCGCC	2 cut(s)	142, 1455
EheI	GGCGCC	2 cut(s)	142, 1455
ErhI	CCWWGG	3 cut(s)	483, 1123, 1341
Esp3I	CGTCTC	2 cut(s)	747, 753
FaeI	CATG	4 cut(s)	62, 439, 1212, 1453
FaiI	YATR	7 cut(s)	60, 437, 1185, 1210, 1451, 1637, 1839
FalI	AAGNNNNNCTT	2 cut(s)	784, 816
FaqI	GGGAC	4 cut(s)	415, 476, 1631, 1768
FatI	CATG	4 cut(s)	58, 435, 1208, 1449
FauI	CCCGC	1 cut(s)	773
FbaI	TGATCA	1 cut(s)	1479
FblI	GTMKAC	4 cut(s)	555, 1143, 1729, 1778
FokI	GGATG	3 cut(s)	266, 290, 1337
FriOI	GRGCYC	3 cut(s)	931, 1193, 1530
FspBI	CTAG	5 cut(s)	44, 77, 560, 1233, 1784
GlaI	GCGC	5 cut(s)	142, 505, 1251, 1455, 1713
GsaI	CCCAGC	1 cut(s)	343
HaeII	RGCGCY	2 cut(s)	144, 1457
HaeIII	GGCC	5 cut(s)	414, 527, 572, 938, 1244
HapII	CCGG	4 cut(s)	327, 534, 1050, 1457
HgaI	GACGC	5 cut(s)	379, 798, 887, 907, 1105
HhaI	GCGC	5 cut(s)	143, 506, 1252, 1456, 1714
Hin1I	GRCGYC	6 cut(s)	141, 270, 390, 809, 879, 1454
Hin1II	CATG	4 cut(s)	62, 439, 1212, 1453
Hin6I	GCGC	5 cut(s)	141, 504, 1250, 1454, 1712
HinP1I	GCGC	5 cut(s)	141, 504, 1250, 1454, 1712
HincII	GTYRAC	4 cut(s)	313, 475, 1730, 1779
HindII	GTYRAC	4 cut(s)	313, 475, 1730, 1779
HindIII	AAGCTT	1 cut(s)	1746
HpaII	CCGG	4 cut(s)	327, 534, 1050, 1457
HphI	GGTGA	7 cut(s)	409, 460, 472, 723, 834, 1036, 1565
Hpy166II	GTNNAC	8 cut(s)	313, 475, 556, 618, 1120, 1144, 1730, 1779
Hpy188III	TCNNGA	4 cut(s)	364, 1107, 1536, 1784
Hpy8I	GTNNAC	8 cut(s)	313, 475, 556, 618, 1120, 1144, 1730, 1779
HpyAV	CCTTC	7 cut(s)	676, 711, 867, 1006, 1167, 1595, 1653
HpyCH4III	ACNGT	2 cut(s)	472, 1727
HpyCH4IV	ACGT	7 cut(s)	20, 129, 270, 566, 1038, 1239, 1428
HpyCH4V	TGCA	8 cut(s)	50, 58, 135, 156, 439, 718, 1328, 1505
HpyF10VI	GCNNNNNNNGC	9 cut(s)	64, 132, 524, 527, 853, 935, 1346, 1570, 1694
HpyF3I	CTNAG	6 cut(s)	224, 1549, 1698, 1716, 1806, 1814
HpySE526I	ACGT	7 cut(s)	20, 129, 270, 566, 1038, 1239, 1428
Hsp92I	GRCGYC	6 cut(s)	141, 270, 390, 809, 879, 1454
Hsp92II	CATG	4 cut(s)	62, 439, 1212, 1453
HspAI	GCGC	5 cut(s)	141, 504, 1250, 1454, 1712
KasI	GGCGCC	2 cut(s)	140, 1453
KroI	GCCGGC	1 cut(s)	533
KroNI	GCCGGC	1 cut(s)	535
Ksp22I	TGATCA	1 cut(s)	1479
Kzo9I	GATC	7 cut(s)	1059, 1077, 1479, 1639, 1719, 1792, 1810
LguI	GCTCTTC	1 cut(s)	786
Lsp1109I	GCAGC	7 cut(s)	62, 76, 100, 641, 730, 1320, 1691
LweI	GCATC	5 cut(s)	165, 491, 546, 1315, 1792
MaeI	CTAG	5 cut(s)	44, 77, 560, 1233, 1784
MaeII	ACGT	7 cut(s)	20, 129, 270, 566, 1038, 1239, 1428
MaeIII	GTNAC	2 cut(s)	562, 1235
MalI	GATC	7 cut(s)	1061, 1079, 1481, 1641, 1721, 1794, 1812
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	7 cut(s)	1059, 1077, 1479, 1639, 1719, 1792, 1810
MfeI	CAATTG	1 cut(s)	579
MflI	RGATCY	3 cut(s)	1639, 1792, 1810
MhlI	GDGCHC	4 cut(s)	931, 1193, 1530, 1566
MlsI	TGGCCA	1 cut(s)	1244
MluCI	AATT	5 cut(s)	579, 944, 1267, 1351, 1623
MluNI	TGGCCA	1 cut(s)	1244
Mly113I	GGCGCC	2 cut(s)	141, 1454
MlyI	GAGTC	6 cut(s)	623, 965, 1095, 1589, 1750, 1774
MmeI	TCCRAC	6 cut(s)	291, 809, 984, 1113, 1359, 1503
Mox20I	TGGCCA	1 cut(s)	1244
MroNI	GCCGGC	1 cut(s)	533
MscI	TGGCCA	1 cut(s)	1244
MseI	TTAA	3 cut(s)	23, 1286, 1626
MslI	CAYNNNNRTG	1 cut(s)	1573
Msp20I	TGGCCA	1 cut(s)	1244
MspA1I	CMGCKG	1 cut(s)	53
MspI	CCGG	4 cut(s)	327, 534, 1050, 1457
MspR9I	CCNGG	4 cut(s)	410, 524, 1322, 1673
MunI	CAATTG	1 cut(s)	579
MvaI	CCWGG	4 cut(s)	410, 524, 1322, 1673
MwoI	GCNNNNNNNGC	9 cut(s)	64, 132, 524, 527, 853, 935, 1346, 1570, 1694
NaeI	GCCGGC	1 cut(s)	535
NarI	GGCGCC	2 cut(s)	141, 1454
NdeII	GATC	7 cut(s)	1059, 1077, 1479, 1639, 1719, 1792, 1810
NgoMIV	GCCGGC	1 cut(s)	533
NlaIII	CATG	4 cut(s)	62, 439, 1212, 1453
NlaIV	GGNNCC	7 cut(s)	142, 684, 976, 1192, 1455, 1641, 1794
NmeAIII	GCCGAG	1 cut(s)	794
NmuCI	GTSAC	2 cut(s)	562, 1235
PciSI	GCTCTTC	1 cut(s)	786
PcsI	WCGNNNNNNNCGW	6 cut(s)	453, 633, 882, 978, 1005, 1014
PdiI	GCCGGC	1 cut(s)	535
PfeI	GAWTC	4 cut(s)	966, 1110, 1768, 1820
PfoI	TCCNGGA	1 cut(s)	1320
PleI	GAGTC	6 cut(s)	622, 964, 1095, 1588, 1750, 1774
PluTI	GGCGCC	2 cut(s)	144, 1457
PmaCI	CACGTG	2 cut(s)	567, 1429
PmlI	CACGTG	2 cut(s)	567, 1429
PpsI	GAGTC	6 cut(s)	622, 964, 1095, 1588, 1750, 1774
Ppu21I	YACGTR	2 cut(s)	567, 1429
PshBI	ATTAAT	1 cut(s)	1286
Psp124BI	GAGCTC	2 cut(s)	931, 1530
Psp1406I	AACGTT	1 cut(s)	20
Psp6I	CCWGG	4 cut(s)	408, 522, 1320, 1671
PspCI	CACGTG	2 cut(s)	567, 1429
PspFI	CCCAGC	1 cut(s)	339
PspGI	CCWGG	4 cut(s)	408, 522, 1320, 1671
PspN4I	GGNNCC	7 cut(s)	142, 684, 976, 1192, 1455, 1641, 1794
PspPI	GGNCC	4 cut(s)	412, 570, 936, 1669
PstI	CTGCAG	1 cut(s)	720
PsuI	RGATCY	3 cut(s)	1639, 1792, 1810
PvuII	CAGCTG	1 cut(s)	53
RsaI	GTAC	3 cut(s)	1438, 1463, 1661
RsaNI	GTAC	3 cut(s)	1437, 1462, 1660
RseI	CAYNNNNRTG	1 cut(s)	1573
SacI	GAGCTC	2 cut(s)	931, 1530
SalI	GTCGAC	2 cut(s)	1728, 1777
SapI	GCTCTTC	1 cut(s)	786
SaqAI	TTAA	3 cut(s)	23, 1286, 1626
Sau3AI	GATC	7 cut(s)	1059, 1077, 1479, 1639, 1719, 1792, 1810
Sau96I	GGNCC	4 cut(s)	412, 570, 936, 1669
SchI	GAGTC	6 cut(s)	623, 965, 1095, 1589, 1750, 1774
ScrFI	CCNGG	4 cut(s)	410, 524, 1322, 1673
SduI	GDGCHC	4 cut(s)	931, 1193, 1530, 1566
SfaNI	GCATC	5 cut(s)	165, 491, 546, 1315, 1792
SfcI	CTRYAG	1 cut(s)	716
SfoI	GGCGCC	2 cut(s)	142, 1455
SinI	GGWCC	1 cut(s)	1669
SmiMI	CAYNNNNRTG	1 cut(s)	1573
SmlI	CTYRAG	3 cut(s)	362, 1333, 1743
SmoI	CTYRAG	3 cut(s)	362, 1333, 1743
SpeI	ACTAGT	1 cut(s)	43
Sse9I	AATT	5 cut(s)	579, 944, 1267, 1351, 1623
SspDI	GGCGCC	2 cut(s)	140, 1453
SspMI	CTAG	5 cut(s)	44, 77, 560, 1233, 1784
SstI	GAGCTC	2 cut(s)	931, 1530
StyD4I	CCNGG	4 cut(s)	408, 522, 1320, 1671
StyI	CCWWGG	3 cut(s)	483, 1123, 1341
TaaI	ACNGT	2 cut(s)	472, 1727
TaiI	ACGT	7 cut(s)	23, 132, 273, 569, 1041, 1242, 1431
TaqI	TCGA	9 cut(s)	93, 183, 999, 1374, 1494, 1682, 1729, 1763, 1778
TaqII	GACCGA	1 cut(s)	474
TasI	AATT	5 cut(s)	579, 944, 1267, 1351, 1623
TatI	WGTACW	1 cut(s)	1461
TauI	GCSGC	8 cut(s)	521, 530, 533, 757, 779, 856, 884, 1016
TfiI	GAWTC	4 cut(s)	966, 1110, 1768, 1820
Tru1I	TTAA	3 cut(s)	23, 1286, 1626
Tru9I	TTAA	3 cut(s)	23, 1286, 1626
TscAI	CASTG	1 cut(s)	1252
TseFI	GTSAC	2 cut(s)	562, 1235
TseI	GCWGC	8 cut(s)	13, 50, 64, 88, 629, 718, 1308, 1704
Tsp45I	GTSAC	2 cut(s)	562, 1235
TspDTI	ATGAA	4 cut(s)	17, 23, 792, 1172
TspGWI	ACGGA	4 cut(s)	729, 735, 970, 1488
TspRI	CASTG	1 cut(s)	1252
VpaK11BI	GGWCC	1 cut(s)	1669
VspI	ATTAAT	1 cut(s)	1286
XbaI	TCTAGA	1 cut(s)	1783
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1357
XmiI	GTMKAC	4 cut(s)	555, 1143, 1729, 1778
XspI	CTAG	5 cut(s)	44, 77, 560, 1233, 1784
ZraI	GACGTC	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.