Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0008355

Physical Location & Seq

Genomic Coordinates Reverse (-)

33432863 .. 33435256

Gene Structure 2394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G026350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGAAGATGAAGTTGCTAACGTTAATGGTGGTCTCTGTTCTACTAGTTGCAGCTGTGCATGGGCAGCAGACCTACCTAGCCAACAAGCAGCTCGACTGCTACAACAACTACAACTCCACCGACGGCTACGTCTGCAACGGCGCCTCCCCCTCTTGCATCTCCTACCTCACTTTCCGCTCCATCAACCCTCTCTACAACTCCCCAACCTCTATCGCCTACCTCCTCGACTCCACCCCCTCCGAAATCGCCTCCGCCAACAACATCTCCGACGTCGCCCCCATCGCCGCCGACACCCTCGTCCTCGTCCCCGTCAACTGCTCCTGCTCCGGCAACTACTCCCAGCACAACGCCTCCTACACCCTCAAGACCGCCTCCGACACCTACTTCGGCGTCGCCAACAACACCTACCAGGGCCTCACCACCTGTCAGTCCCTTATGCACCAGAACCCCTACGGCGACCGAAACCTCACTGTCGGCCTCCCCTTGGAAGTCCCCGTCAGATGCGCCTGCCCCACCGCCGCCCAGGCCGCCGCTGGCATCAACTACCTGCTCGTCTACTTAGTCACGTGGGGCGACTCAACTGAAGCAATCGCTCAACGCTTCGGCGTAGATGAGTCCACCTTGCTCGCAGCCAATGACCTGTTGTCCACCGACATCATCTATCCCTTCACGCCCTTACTGGTTCCTCTCAAAACCAAACCTTCCCCTCTTCAACTGCAGCTCCCAACCTCACCTCCTCCGTCTCCGTCTCCGCCGCCTCCTCCCCGGCCGAGTGGCGGCTCTTCCAACAACAAGTGGGTCTTCATCGGCGTCGGCATCGGAGCTGGTTGCCTCCTCCTCCTCACCGCCCTCGCCGCCTTCCTCTTCTTATCCAAACGACGCCGCCGTCAGCTCCGCCAATCTCCCAAACCCAACTTGCGTCCAAAGAGCTCCGGTGACTACACGCCGAACTCTCTGCTACCCACCATCGCCTCCGACGACACAACGAAATCGTGGTCTTCCAGCGGGCTTAACATTGCGGTGGAGTCCTTGACGCCTTACAAATTCCAAGACCTGCAGAGGGCCACCCAATTCTTCAGCGAGTCCAACAGAATCAACGGCTCCTCCGTTTTCAGAGCAACCTTCGACGGCGACGAAGCCGCCGTCAAGGTGATGACAGGCGACGTGGCACTCTCCGGCGACGAGATCAACATTCTGAAGCGGATCAATCACTCCAACATTATCAGACTCTCTGGATTCTGTGTCCACCAAGGAAACACTTACCTCGTTTACGAGTTCGCTCCTTTTGGCTCACTCATTGATTGTCTTCATAAGGGCGCCATTAGTCCTCTGTCATGGAAGCAGAGAGTTCAGATTGCTAGTGACGTGGCCAGTGCGCTCAACTATATACACAATTTCACAGAGCCTCCATTAATCCACAAGAACCTCAACAGCAGCAACATTCTCCTGGATGCAAACTTGAGAGCCAAGGTTGCCAATTTTGGTCTGGCAAGAGCTGTCGAGTTGGATAACGAAGACGAAGATGGAGAACAGGGATTTCAACAGACGAGGCACGTGGTGGGTACGAGGGGCTACATGGCGCCGGAGTACATTGAAAACGGAGTGATCACTCCGAAGCTCGATGTGTTTGCATTTGGGGTTGTTTTGTTGGAGCTCTTGTCTGGAAGAAGAGCCTCTGGTGATGAAGAGCACACATTGCTGTATGAGTCCATTAGTGGGGTGCTTGAAGGAGATGATGTGAGGGACAAAATTAAAGAGTTTATGGATCCTTCTCTGAAAAGCAAGTACCCTTTGGACCTGGCGTTTTCGATGGCTCAGCTCGCTAAGAGCTGTGTTGCGCCCCAGATCAACAATCGACCCACAATGGCTCAAGCTTCGGGGACTCTATCGAAGATTCTTTCGTCGACTCTAGACTGGGATCCATCTGATGCTGAGGATCTTAGAGATTCAAGGTCACTCAGTTATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009719 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

657

Amino Acids

71.39

Weight (kDa)

5.86

Isoelectric Point (pI)

50.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	51 - 108	1.5e-18	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	112 - 167	6.2e-26	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	182 - 230	1.7e-21	LYK4/5 LysM3 domain
LysM	PF01476	186 - 229	6.5e-07	LysM domain
Pkinase	PF00069	369 - 625	5.3e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	393 - 625	9.3e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33580
fragaria_vesca	FvH4_5g26710 FvH4_5g26740
prunus_persica	Prupe.5G001000_v2.0.a1
pyrus_communis	pycom16g26340
rosa_chinensis	RchiOBHm_Chr7g0217591 RchiOBHm_Chr7g0217601
rosa_laevigata	RLG00000002457 RLG00000002458
rosa_multiflora	Rmu_co8386267.1_g000001 Rmu_sc0006161.1_g000002 Rmu_ssc0000225.1_g000002
rosa_roxburghii	Rroxscaffold_3G00241810 Rroxscaffold_3G00241840
rosa_rugosa	Rorug07G0170300 Rorug07G0170300
rosa_samantha	Rh7AG310400 Rh7BG301700 Rh7CG329400 Rh7DG309800 Rh7DG310500
rosa_wichuraiana	Rw7G026310 Rw7G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	128, 296, 885
AatII	GACGTC	1 cut(s)	273
Acc36I	ACCTGC	2 cut(s)	555, 1062
AccB1I	GGYRCC	3 cut(s)	140, 1316, 1579
AccBSI	CCGCTC	1 cut(s)	177
AccI	GTMKAC	2 cut(s)	555, 1904
AclI	AACGTT	1 cut(s)	20
AclWI	GGATC	6 cut(s)	1211, 1760, 1773, 1913, 1926, 1944
AcoI	YGGCCR	2 cut(s)	767, 1368
AcsI	RAATTY	1 cut(s)	1043
AcuI	CTGAAG	3 cut(s)	603, 1060, 1217
AcvI	CACGTG	2 cut(s)	567, 1555
AcyI	GRCGYC	8 cut(s)	141, 270, 390, 810, 880, 1034, 1317, 1580
AdeI	CACNNNGTG	1 cut(s)	1558
AfaI	GTAC	3 cut(s)	1564, 1589, 1787
AfiI	CCNNNNNNNGG	4 cut(s)	484, 776, 1060, 1716
AgsI	TTSAA	5 cut(s)	713, 1541, 1595, 1727, 1950
AhdI	GACNNNNNGTC	1 cut(s)	643
AhlI	ACTAGT	1 cut(s)	43
AjiI	CACGTC	2 cut(s)	1165, 1366
AjnI	CCWGG	4 cut(s)	408, 522, 1446, 1797
Alw21I	GWGCWC	3 cut(s)	932, 1656, 1692
Alw26I	GTCTC	3 cut(s)	37, 747, 753
AlwI	GGATC	6 cut(s)	1211, 1760, 1773, 1913, 1926, 1944
AoxI	GGCC	6 cut(s)	412, 475, 525, 767, 1062, 1368
ApeKI	GCWGC	6 cut(s)	50, 64, 88, 629, 718, 1434
ApoI	RAATTY	1 cut(s)	1043
ArsI	GACNNNNNNTTYG	6 cut(s)	368, 400, 980, 1012, 1128, 1160
AseI	ATTAAT	1 cut(s)	1412
AspLEI	GCGC	6 cut(s)	143, 506, 1319, 1378, 1582, 1840
AspS9I	GGNCC	3 cut(s)	412, 1062, 1795
AsuC2I	CCSGG	1 cut(s)	766
AsuHPI	GGTGA	6 cut(s)	409, 723, 835, 947, 1162, 1691
AvaII	GGWCC	1 cut(s)	1795
BalI	TGGCCA	1 cut(s)	1370
BamHI	GGATCC	2 cut(s)	1765, 1918
BanI	GGYRCC	3 cut(s)	140, 1316, 1579
BanII	GRGCYC	2 cut(s)	932, 1656
BbrPI	CACGTG	2 cut(s)	567, 1555
BbsI	GAAGAC	4 cut(s)	793, 990, 1298, 1521
Bbv12I	GWGCWC	3 cut(s)	932, 1656, 1692
BbvCI	CCTCAGC	1 cut(s)	1932
BbvI	GCAGC	6 cut(s)	62, 76, 100, 641, 730, 1446
BccI	CCATC	6 cut(s)	188, 287, 974, 1517, 1804, 1930
BceAI	ACGGC	7 cut(s)	139, 154, 469, 870, 1114, 1127, 1144
BcgI	CGANNNNNNTGC	4 cut(s)	937, 971, 1610, 1644
BciT130I	CCWGG	4 cut(s)	410, 524, 1448, 1799
BclI	TGATCA	1 cut(s)	1605
BcnI	CCSGG	1 cut(s)	766
BcoDI	GTCTC	3 cut(s)	37, 747, 753
BcuI	ACTAGT	1 cut(s)	43
BfaI	CTAG	4 cut(s)	44, 77, 1359, 1910
BfmI	CTRYAG	2 cut(s)	716, 1055
BfoI	RGCGCY	3 cut(s)	144, 1320, 1583
BfuAI	ACCTGC	2 cut(s)	555, 1062
BglI	GCCNNNNNGGC	1 cut(s)	524
BlpI	GCTNAGC	1 cut(s)	1815
Bme1390I	CCNGG	5 cut(s)	410, 524, 766, 1448, 1799
Bme18I	GGWCC	1 cut(s)	1795
BmeRI	GACNNNNNGTC	1 cut(s)	643
BmgBI	CACGTC	2 cut(s)	1165, 1366
BmgT120I	GGNCC	3 cut(s)	412, 1062, 1795
BmiI	GGNNCC	7 cut(s)	142, 684, 1102, 1318, 1581, 1767, 1920
BmrFI	CCNGG	5 cut(s)	410, 524, 766, 1448, 1799
BmrI	ACTGGG	1 cut(s)	1924
BmsI	GCATC	6 cut(s)	165, 491, 546, 825, 1441, 1918
BmuI	ACTGGG	1 cut(s)	1924
BpiI	GAAGAC	4 cut(s)	793, 990, 1298, 1521
Bpu10I	CCTNAGC	1 cut(s)	1932
Bpu1102I	GCTNAGC	1 cut(s)	1815
BpuEI	CTTGAG	3 cut(s)	347, 1480, 1854
BpuMI	CCSGG	1 cut(s)	766
BsaAI	YACGTR	2 cut(s)	567, 1555
BsaHI	GRCGYC	8 cut(s)	141, 270, 390, 810, 880, 1034, 1317, 1580
BsaI	GGTCTC	1 cut(s)	37
BsaJI	CCNNGG	6 cut(s)	409, 483, 522, 764, 1249, 1467
BsaWI	WCCGGW	1 cut(s)	932
Bsc4I	CCNNNNNNNGG	4 cut(s)	484, 776, 1060, 1716
Bse1I	ACTGG	3 cut(s)	684, 1371, 1919
Bse3DI	GCAATG	2 cut(s)	1014, 1694
BseBI	CCWGG	4 cut(s)	410, 524, 1448, 1799
BseDI	CCNNGG	6 cut(s)	409, 483, 522, 764, 1249, 1467
BseGI	GGATG	1 cut(s)	1456
BseLI	CCNNNNNNNGG	4 cut(s)	484, 776, 1060, 1716
BseMI	GCAATG	2 cut(s)	1014, 1694
BseMII	CTCAG	3 cut(s)	1829, 1923, 1972
BseNI	ACTGG	3 cut(s)	684, 1371, 1919
BseRI	GAGGAG	7 cut(s)	212, 726, 750, 824, 827, 830, 1093
BseX3I	CGGCCG	1 cut(s)	767
BseXI	GCAGC	6 cut(s)	62, 76, 100, 641, 730, 1446
BseYI	CCCAGC	1 cut(s)	339
Bsh1285I	CGRYCG	2 cut(s)	460, 770
BshFI	GGCC	6 cut(s)	414, 477, 527, 769, 1064, 1370
BshNI	GGYRCC	3 cut(s)	140, 1316, 1579
BsiEI	CGRYCG	2 cut(s)	460, 770
BsiHKAI	GWGCWC	3 cut(s)	932, 1656, 1692
BsiSI	CCGG	5 cut(s)	327, 766, 933, 1176, 1583
BslFI	GGGAC	5 cut(s)	290, 415, 476, 1757, 1894
BslI	CCNNNNNNNGG	4 cut(s)	484, 776, 1060, 1716
BsmAI	GTCTC	3 cut(s)	37, 747, 753
BsmBI	CGTCTC	2 cut(s)	747, 753
BsmFI	GGGAC	5 cut(s)	290, 415, 476, 1757, 1894
BsnI	GGCC	6 cut(s)	414, 477, 527, 769, 1064, 1370
Bso31I	GGTCTC	1 cut(s)	37
Bsp1286I	GDGCHC	3 cut(s)	932, 1656, 1692
Bsp143I	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
Bsp1720I	GCTNAGC	1 cut(s)	1815
BspANI	GGCC	6 cut(s)	414, 477, 527, 769, 1064, 1370
BspCNI	CTCAG	3 cut(s)	1828, 1924, 1971
BspLI	GGNNCC	7 cut(s)	142, 684, 1102, 1318, 1581, 1767, 1920
BspMAI	CTGCAG	2 cut(s)	720, 1059
BspMI	ACCTGC	2 cut(s)	555, 1062
BspPI	GGATC	6 cut(s)	1211, 1760, 1773, 1913, 1926, 1944
BspQI	GCTCTTC	3 cut(s)	787, 1663, 1680
BspT107I	GGYRCC	3 cut(s)	140, 1316, 1579
BspTNI	GGTCTC	1 cut(s)	37
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	2 cut(s)	1014, 1694
BsrI	ACTGG	3 cut(s)	684, 1371, 1919
BssECI	CCNNGG	6 cut(s)	409, 483, 522, 764, 1249, 1467
BssMI	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
BssNI	GRCGYC	8 cut(s)	141, 270, 390, 810, 880, 1034, 1317, 1580
BssT1I	CCWWGG	3 cut(s)	483, 1249, 1467
Bst2UI	CCWGG	4 cut(s)	410, 524, 1448, 1799
Bst4CI	ACNGT	1 cut(s)	472
Bst6I	CTCTTC	5 cut(s)	714, 787, 869, 1663, 1680
BstACI	GRCGYC	8 cut(s)	141, 270, 390, 810, 880, 1034, 1317, 1580
BstAPI	GCANNNNNTGC	1 cut(s)	1696
BstBAI	YACGTR	2 cut(s)	567, 1555
BstC8I	GCNNGC	5 cut(s)	508, 535, 627, 1007, 1821
BstDEI	CTNAG	6 cut(s)	559, 1815, 1824, 1932, 1940, 1958
BstF5I	GGATG	1 cut(s)	1456
BstH2I	RGCGCY	3 cut(s)	144, 1320, 1583
BstHHI	GCGC	6 cut(s)	143, 506, 1319, 1378, 1582, 1840
BstKTI	GATC	7 cut(s)	1188, 1206, 1608, 1768, 1848, 1921, 1939
BstMAI	GTCTC	3 cut(s)	37, 747, 753
BstMBI	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
BstMCI	CGRYCG	2 cut(s)	460, 770
BstMWI	GCNNNNNNNGC	9 cut(s)	64, 132, 281, 524, 527, 854, 1472, 1696, 1820
BstNI	CCWGG	4 cut(s)	410, 524, 1448, 1799
BstSCI	CCNGG	5 cut(s)	408, 522, 764, 1446, 1797
BstSFI	CTRYAG	2 cut(s)	716, 1055
BstV1I	GCAGC	6 cut(s)	62, 76, 100, 641, 730, 1446
BstV2I	GAAGAC	4 cut(s)	793, 990, 1298, 1521
BstX2I	RGATCY	3 cut(s)	1765, 1918, 1936
BstYI	RGATCY	3 cut(s)	1765, 1918, 1936
BstZI	CGGCCG	1 cut(s)	767
BsuRI	GGCC	6 cut(s)	414, 477, 527, 769, 1064, 1370
BtgZI	GCGATG	2 cut(s)	265, 952
BtrI	CACGTC	2 cut(s)	1165, 1366
BtsCI	GGATG	1 cut(s)	1456
BtsIMutI	CAGTG	2 cut(s)	468, 1378
BveI	ACCTGC	2 cut(s)	555, 1062
Cac8I	GCNNGC	5 cut(s)	508, 535, 627, 1007, 1821
CfoI	GCGC	6 cut(s)	143, 506, 1319, 1378, 1582, 1840
Cfr13I	GGNCC	3 cut(s)	412, 1062, 1795
CseI	GACGC	5 cut(s)	379, 799, 888, 908, 1042
Csp6I	GTAC	3 cut(s)	1563, 1588, 1786
CviAII	CATG	3 cut(s)	59, 1335, 1576
CviQI	GTAC	3 cut(s)	1563, 1588, 1786
DdeI	CTNAG	6 cut(s)	559, 1815, 1824, 1932, 1940, 1958
DinI	GGCGCC	3 cut(s)	142, 1318, 1581
DpnI	GATC	7 cut(s)	1187, 1205, 1607, 1767, 1847, 1920, 1938
DpnII	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
DraIII	CACNNNGTG	1 cut(s)	1558
DrdI	GACNNNNNNGTC	3 cut(s)	128, 296, 885
DriI	GACNNNNNGTC	1 cut(s)	643
DseDI	GACNNNNNNGTC	3 cut(s)	128, 296, 885
EaeI	YGGCCR	2 cut(s)	767, 1368
EagI	CGGCCG	1 cut(s)	767
Eam1104I	CTCTTC	5 cut(s)	714, 787, 869, 1663, 1680
Eam1105I	GACNNNNNGTC	1 cut(s)	643
EarI	CTCTTC	5 cut(s)	714, 787, 869, 1663, 1680
EciI	GGCGGA	3 cut(s)	241, 741, 884
Ecl136II	GAGCTC	2 cut(s)	930, 1654
EclXI	CGGCCG	1 cut(s)	767
Eco130I	CCWWGG	3 cut(s)	483, 1249, 1467
Eco24I	GRGCYC	2 cut(s)	932, 1656
Eco31I	GGTCTC	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	1795
Eco52I	CGGCCG	1 cut(s)	767
Eco53kI	GAGCTC	2 cut(s)	930, 1654
Eco57I	CTGAAG	3 cut(s)	603, 1060, 1217
Eco72I	CACGTG	2 cut(s)	567, 1555
EcoICRI	GAGCTC	2 cut(s)	930, 1654
EcoO109I	RGGNCCY	1 cut(s)	412
EcoRII	CCWGG	4 cut(s)	408, 522, 1446, 1797
EcoT14I	CCWWGG	3 cut(s)	483, 1249, 1467
EcoT38I	GRGCYC	2 cut(s)	932, 1656
EgeI	GGCGCC	3 cut(s)	142, 1318, 1581
EheI	GGCGCC	3 cut(s)	142, 1318, 1581
ErhI	CCWWGG	3 cut(s)	483, 1249, 1467
Esp3I	CGTCTC	2 cut(s)	747, 753
FaeI	CATG	3 cut(s)	62, 1338, 1579
FalI	AAGNNNNNCTT	2 cut(s)	785, 817
FaqI	GGGAC	5 cut(s)	290, 415, 476, 1757, 1894
FatI	CATG	3 cut(s)	58, 1334, 1575
FauI	CCCGC	1 cut(s)	998
FbaI	TGATCA	1 cut(s)	1605
FblI	GTMKAC	2 cut(s)	555, 1904
FokI	GGATG	1 cut(s)	1463
FriOI	GRGCYC	2 cut(s)	932, 1656
FspBI	CTAG	4 cut(s)	44, 77, 1359, 1910
GlaI	GCGC	6 cut(s)	142, 505, 1318, 1377, 1581, 1839
GsaI	CCCAGC	1 cut(s)	343
HaeII	RGCGCY	3 cut(s)	144, 1320, 1583
HaeIII	GGCC	6 cut(s)	414, 477, 527, 769, 1064, 1370
HapII	CCGG	5 cut(s)	327, 766, 933, 1176, 1583
HgaI	GACGC	5 cut(s)	379, 799, 888, 908, 1042
HhaI	GCGC	6 cut(s)	143, 506, 1319, 1378, 1582, 1840
Hin1I	GRCGYC	8 cut(s)	141, 270, 390, 810, 880, 1034, 1317, 1580
Hin1II	CATG	3 cut(s)	62, 1338, 1579
Hin6I	GCGC	6 cut(s)	141, 504, 1317, 1376, 1580, 1838
HinP1I	GCGC	6 cut(s)	141, 504, 1317, 1376, 1580, 1838
HincII	GTYRAC	2 cut(s)	313, 1905
HindII	GTYRAC	2 cut(s)	313, 1905
HindIII	AAGCTT	1 cut(s)	1872
HpaII	CCGG	5 cut(s)	327, 766, 933, 1176, 1583
HphI	GGTGA	6 cut(s)	409, 723, 835, 947, 1162, 1691
Hpy166II	GTNNAC	7 cut(s)	313, 556, 618, 648, 1246, 1270, 1905
Hpy188III	TCNNGA	4 cut(s)	364, 1233, 1662, 1910
Hpy8I	GTNNAC	7 cut(s)	313, 556, 618, 648, 1246, 1270, 1905
HpyAV	CCTTC	6 cut(s)	676, 711, 868, 1132, 1721, 1779
HpyCH4III	ACNGT	1 cut(s)	472
HpyCH4IV	ACGT	7 cut(s)	20, 129, 270, 566, 1164, 1365, 1554
HpyCH4V	TGCA	9 cut(s)	50, 58, 135, 156, 439, 718, 1057, 1454, 1631
HpyF10VI	GCNNNNNNNGC	9 cut(s)	64, 132, 281, 524, 527, 854, 1472, 1696, 1820
HpyF3I	CTNAG	6 cut(s)	559, 1815, 1824, 1932, 1940, 1958
HpySE526I	ACGT	7 cut(s)	20, 129, 270, 566, 1164, 1365, 1554
Hsp92I	GRCGYC	8 cut(s)	141, 270, 390, 810, 880, 1034, 1317, 1580
Hsp92II	CATG	3 cut(s)	62, 1338, 1579
HspAI	GCGC	6 cut(s)	141, 504, 1317, 1376, 1580, 1838
KasI	GGCGCC	3 cut(s)	140, 1316, 1579
Ksp22I	TGATCA	1 cut(s)	1605
Kzo9I	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
LguI	GCTCTTC	3 cut(s)	787, 1663, 1680
Lsp1109I	GCAGC	6 cut(s)	62, 76, 100, 641, 730, 1446
LweI	GCATC	6 cut(s)	165, 491, 546, 825, 1441, 1918
MaeI	CTAG	4 cut(s)	44, 77, 1359, 1910
MaeII	ACGT	7 cut(s)	20, 129, 270, 566, 1164, 1365, 1554
MaeIII	GTNAC	4 cut(s)	562, 935, 1361, 1953
MalI	GATC	7 cut(s)	1187, 1205, 1607, 1767, 1847, 1920, 1938
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
MflI	RGATCY	3 cut(s)	1765, 1918, 1936
MhlI	GDGCHC	3 cut(s)	932, 1656, 1692
MlsI	TGGCCA	1 cut(s)	1370
MluCI	AATT	5 cut(s)	1043, 1070, 1393, 1477, 1749
MluNI	TGGCCA	1 cut(s)	1370
Mly113I	GGCGCC	3 cut(s)	141, 1317, 1580
MlyI	GAGTC	9 cut(s)	221, 569, 623, 1034, 1091, 1221, 1715, 1876, 1900
MmeI	TCCRAC	8 cut(s)	291, 399, 810, 999, 1110, 1239, 1485, 1629
Mox20I	TGGCCA	1 cut(s)	1370
MscI	TGGCCA	1 cut(s)	1370
MseI	TTAA	4 cut(s)	23, 1011, 1412, 1752
MslI	CAYNNNNRTG	1 cut(s)	1019
Msp20I	TGGCCA	1 cut(s)	1370
MspA1I	CMGCKG	3 cut(s)	53, 533, 1005
MspI	CCGG	5 cut(s)	327, 766, 933, 1176, 1583
MspR9I	CCNGG	5 cut(s)	410, 524, 766, 1448, 1799
MvaI	CCWGG	4 cut(s)	410, 524, 1448, 1799
MwoI	GCNNNNNNNGC	9 cut(s)	64, 132, 281, 524, 527, 854, 1472, 1696, 1820
NarI	GGCGCC	3 cut(s)	141, 1317, 1580
NciI	CCSGG	1 cut(s)	766
NdeII	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
NlaIII	CATG	3 cut(s)	62, 1338, 1579
NlaIV	GGNNCC	7 cut(s)	142, 684, 1102, 1318, 1581, 1767, 1920
NmeAIII	GCCGAG	1 cut(s)	795
NmuCI	GTSAC	4 cut(s)	562, 935, 1361, 1953
PciSI	GCTCTTC	3 cut(s)	787, 1663, 1680
PcsI	WCGNNNNNNNCGW	5 cut(s)	883, 975, 1104, 1131, 1140
PfeI	GAWTC	4 cut(s)	1092, 1236, 1894, 1946
PfoI	TCCNGGA	1 cut(s)	1446
PleI	GAGTC	9 cut(s)	221, 569, 622, 1033, 1090, 1221, 1714, 1876, 1900
PluTI	GGCGCC	3 cut(s)	144, 1320, 1583
PmaCI	CACGTG	2 cut(s)	567, 1555
PmlI	CACGTG	2 cut(s)	567, 1555
PpsI	GAGTC	9 cut(s)	221, 569, 622, 1033, 1090, 1221, 1714, 1876, 1900
Ppu21I	YACGTR	2 cut(s)	567, 1555
PshBI	ATTAAT	1 cut(s)	1412
Psp124BI	GAGCTC	2 cut(s)	932, 1656
Psp1406I	AACGTT	1 cut(s)	20
Psp6I	CCWGG	4 cut(s)	408, 522, 1446, 1797
PspCI	CACGTG	2 cut(s)	567, 1555
PspFI	CCCAGC	1 cut(s)	339
PspGI	CCWGG	4 cut(s)	408, 522, 1446, 1797
PspN4I	GGNNCC	7 cut(s)	142, 684, 1102, 1318, 1581, 1767, 1920
PspPI	GGNCC	3 cut(s)	412, 1062, 1795
PstI	CTGCAG	2 cut(s)	720, 1059
PsuI	RGATCY	3 cut(s)	1765, 1918, 1936
PvuII	CAGCTG	1 cut(s)	53
RsaI	GTAC	3 cut(s)	1564, 1589, 1787
RsaNI	GTAC	3 cut(s)	1563, 1588, 1786
RseI	CAYNNNNRTG	1 cut(s)	1019
SacI	GAGCTC	2 cut(s)	932, 1656
SalI	GTCGAC	1 cut(s)	1903
SapI	GCTCTTC	3 cut(s)	787, 1663, 1680
SaqAI	TTAA	4 cut(s)	23, 1011, 1412, 1752
Sau3AI	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
Sau96I	GGNCC	3 cut(s)	412, 1062, 1795
SchI	GAGTC	9 cut(s)	221, 569, 623, 1034, 1091, 1221, 1715, 1876, 1900
ScrFI	CCNGG	5 cut(s)	410, 524, 766, 1448, 1799
SduI	GDGCHC	3 cut(s)	932, 1656, 1692
SfaNI	GCATC	6 cut(s)	165, 491, 546, 825, 1441, 1918
SfcI	CTRYAG	2 cut(s)	716, 1055
SfoI	GGCGCC	3 cut(s)	142, 1318, 1581
SinI	GGWCC	1 cut(s)	1795
SmiMI	CAYNNNNRTG	1 cut(s)	1019
SmlI	CTYRAG	3 cut(s)	362, 1459, 1869
SmoI	CTYRAG	3 cut(s)	362, 1459, 1869
SpeI	ACTAGT	1 cut(s)	43
Sse9I	AATT	5 cut(s)	1043, 1070, 1393, 1477, 1749
SspDI	GGCGCC	3 cut(s)	140, 1316, 1579
SspMI	CTAG	4 cut(s)	44, 77, 1359, 1910
SstI	GAGCTC	2 cut(s)	932, 1656
StyD4I	CCNGG	5 cut(s)	408, 522, 764, 1446, 1797
StyI	CCWWGG	3 cut(s)	483, 1249, 1467
TaaI	ACNGT	1 cut(s)	472
TaiI	ACGT	7 cut(s)	23, 132, 273, 569, 1167, 1368, 1557
TaqI	TCGA	9 cut(s)	93, 225, 1125, 1500, 1620, 1808, 1855, 1889, 1904
TaqII	GACCGA	1 cut(s)	474
TasI	AATT	5 cut(s)	1043, 1070, 1393, 1477, 1749
TatI	WGTACW	1 cut(s)	1587
TauI	GCSGC	9 cut(s)	287, 521, 530, 533, 757, 780, 857, 885, 1142
TfiI	GAWTC	4 cut(s)	1092, 1236, 1894, 1946
Tru1I	TTAA	4 cut(s)	23, 1011, 1412, 1752
Tru9I	TTAA	4 cut(s)	23, 1011, 1412, 1752
TscAI	CASTG	2 cut(s)	475, 1378
TseFI	GTSAC	4 cut(s)	562, 935, 1361, 1953
TseI	GCWGC	6 cut(s)	50, 64, 88, 629, 718, 1434
Tsp45I	GTSAC	4 cut(s)	562, 935, 1361, 1953
TspDTI	ATGAA	5 cut(s)	17, 23, 793, 1298, 1698
TspGWI	ACGGA	4 cut(s)	729, 735, 1096, 1614
TspRI	CASTG	2 cut(s)	475, 1378
VpaK11BI	GGWCC	1 cut(s)	1795
VspI	ATTAAT	1 cut(s)	1412
XapI	RAATTY	1 cut(s)	1043
XbaI	TCTAGA	1 cut(s)	1909
XcmI	CCANNNNNNNNNTGG	2 cut(s)	530, 1483
XmiI	GTMKAC	2 cut(s)	555, 1904
XspI	CTAG	4 cut(s)	44, 77, 1359, 1910
ZraI	GACGTC	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.