Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0008355

Physical Location & Seq

Genomic Coordinates Reverse (-)

34881631 .. 34886642

Gene Structure 5012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG310400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGAAGATGAAGTTGCTAACGCTAATGGTGGTCTCTGTTCTACTAGTTGCAGCTGTGCATGGGCAGCAGACCTACCTAGCCAACAAGCAGCTCGACTGCTACAACAACTACAACTCCACCGACGGCTACGTCTGCAACGGCACCTCCCCCTCTTGCACCTCCTACCTCACTTTCCGCTCCATCAACCCTCTCTACAACTCCCCAACCTCTATCGCCTACCTCCTCGGCTCCACCCCCTCCGAAATCGCCTCCGCCAACAACATCTCCGACGTCGCCCCCATCGCCGCCGACACCCTCGTCCTCGTCCCCGTCAACTGCTCCTGCTCCGGCAACTACTCCCAGCACAACGCCTCCTACACCCTCAAGACCGCCTCCGACACCTACTTCGGCGTCGCCAACAACACCTACCAGGGCCTCACCACCTGTCAGTCCCTCATGCACCAGAACCCCTACGGCGACCGAAACCTCACTGTCGGCCTCCCCTTGGAAGTCCCCGTCAGATGCGCCTGCCCCACCGCCGCCCAGGCCGCCGCCGGCATCAACTACCTGCTCGTCTACCTAGTCACGTGGGACGACGCAACTGAAGCAATCGCTCAACGCTTCGGCGTAGATGAGTCCACCTTGCTCGCAGCCAACGACCTGTCGCCCACCGACATCATCTATCCCTTCACGCCCTTACTGGTTCCTCTCAAAACCAAACCTTCCCCTCTTCAACTGCAGCTCCCAACCTCACCTCCTCCGTCTCCGTCTCCGCCGCCTCCCCCGCCGAGTGGCGGCTCTTCCAACAACAAGTGGGTCTTCATCGGCGTCGGCATCGGAGCTGGTTGTCTCCTCCTCCTCACCGCCCTCGCCGTTTTCCTCTTCTTATCCAAACGACGCCGCCGCCAGCTCCGCCAATCTCCCAAACCCAACTTGCGTCCAAAGAGCTCCGGTGACTACACGCCGAACTCTCTGCTACCCACCACCGCCTCCAACGACACAACGAAATCGTGGTCTTCCAGCGGGCTTAAAATTGCGGTGGAGTCCTTGACGCCTTACAAATTCCAAGACCTGCAGAGGGCCACCCAATTCTTCAGCGAATCCAACAGAATCAACGGCTCCTCCGTTTTCAGAGCAAACTTCGACGGCGACGAGGCCGCCGTCAAGGTGATGACAGGCGACGTGGCAGTCTCCGGCGACGAGATCAACATTCTGAAGCGGATCAATCACTCCAACATTATCAGACTCTCTGGATTCTGCGTCCACCAAGGAAACACTTACTTCGTCTACGAGTTCGCTCCTTCTGGCTCACTCATTGATTGTCTTCGTAAGGGCGCCATTAGTCCTCTGTCATGGAAGCAGAGAGTTCAGATTGCTAGTGACATGGCCGGTGCGCTCAACTATCTACACAATTTCACAGAGCCTCCATTAATCCACAAGAACCTCAACAGCAGCAACATTCTCCTGGATGCAAACTTGAGAGCCAAGGTTGCCAATTTCGGTCTGGCAAGAGCTGTCGAGTTGGATAACGAAGACGAAGATGGAGAACAGGGATTTCAACAGACGAGGCACGTGGTGGGTACGAGGGGCTACATGGCGCCGGAGTACATTGAAAACGGAGTGATCACTCCGAAGCTCGATGTGTTTGCATTTGGGGTTGTTTTGTTGGAGCTCTTGTCTGGAAGAAGAGCCTCTGGTGATGAAGAGCACACATTGCTGTATGAGTCCATTAGTGGGGTGCTTGAAGGAGATGATGTGAGGGACAAAATTAAAGAGTTTATGGATCCTTCTCTGAAAAGCGAGTACCCTTTGGACCTGGCGTTTTCGATGGCTCAGCTCGCTAAGAGCTGTGTTGCGCCTCAGATCAACTGTCGACCCACAATGGCTCAAGCTTCGGGGACTCTATCAAAGATTCTTTCGTCGACTCTAGACTGGGATCCATCTGATGCTGAGGATCTTAGAGATTCAAGGTCACTCAATTATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009719 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

656

Amino Acids

71.26

Weight (kDa)

5.8

Isoelectric Point (pI)

50.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	51 - 108	1.2e-19	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	112 - 167	6.2e-26	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	182 - 230	1.3e-20	LYK4/5 LysM3 domain
LysM	PF01476	195 - 229	4.9e-06	LysM domain
Pkinase	PF00069	372 - 624	3.4e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	392 - 624	5.4e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33580
fragaria_vesca	FvH4_5g26710 FvH4_5g26740
prunus_persica	Prupe.5G001000_v2.0.a1
pyrus_communis	pycom16g26340
rosa_chinensis	RchiOBHm_Chr7g0217591 RchiOBHm_Chr7g0217601
rosa_laevigata	RLG00000002457 RLG00000002458
rosa_multiflora	Rmu_co8386267.1_g000001 Rmu_sc0006161.1_g000002 Rmu_ssc0000225.1_g000002
rosa_roxburghii	Rroxscaffold_3G00241810 Rroxscaffold_3G00241840
rosa_rugosa	Rorug07G0170300 Rorug07G0170300
rosa_samantha	Rh7AG310400 Rh7BG301700 Rh7CG329400 Rh7DG309800 Rh7DG310500
rosa_wichuraiana	Rw7G026310 Rw7G026350

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	128, 296, 1166
AatII	GACGTC	1 cut(s)	273
Acc36I	ACCTGC	2 cut(s)	555, 1059
AccB1I	GGYRCC	3 cut(s)	140, 1313, 1576
AccBSI	CCGCTC	1 cut(s)	177
AccI	GTMKAC	4 cut(s)	555, 1266, 1852, 1901
AclWI	GGATC	6 cut(s)	1208, 1757, 1770, 1910, 1923, 1941
AcoI	YGGCCR	1 cut(s)	1365
AcsI	RAATTY	1 cut(s)	1040
AcuI	CTGAAG	3 cut(s)	603, 1057, 1214
AcvI	CACGTG	2 cut(s)	567, 1552
AcyI	GRCGYC	7 cut(s)	270, 390, 807, 877, 1031, 1314, 1577
AdeI	CACNNNGTG	1 cut(s)	1555
AfaI	GTAC	3 cut(s)	1561, 1586, 1784
AfiI	CCNNNNNNNGG	5 cut(s)	484, 770, 773, 1057, 1713
AgsI	TTSAA	5 cut(s)	713, 1538, 1592, 1724, 1947
AhlI	ACTAGT	1 cut(s)	43
AjiI	CACGTC	1 cut(s)	1162
AjnI	CCWGG	4 cut(s)	408, 522, 1443, 1794
Alw21I	GWGCWC	3 cut(s)	929, 1653, 1689
Alw26I	GTCTC	5 cut(s)	37, 747, 753, 833, 1174
AlwI	GGATC	6 cut(s)	1208, 1757, 1770, 1910, 1923, 1941
AoxI	GGCC	6 cut(s)	412, 475, 525, 1059, 1134, 1365
ApeKI	GCWGC	6 cut(s)	50, 64, 88, 629, 718, 1431
ApoI	RAATTY	1 cut(s)	1040
ArsI	GACNNNNNNTTYG	4 cut(s)	368, 400, 977, 1009
AseI	ATTAAT	1 cut(s)	1409
AspLEI	GCGC	5 cut(s)	506, 1316, 1375, 1579, 1837
AspS9I	GGNCC	3 cut(s)	412, 1059, 1792
AsuHPI	GGTGA	6 cut(s)	409, 723, 832, 944, 1159, 1688
AvaII	GGWCC	1 cut(s)	1792
BamHI	GGATCC	2 cut(s)	1762, 1915
BanI	GGYRCC	3 cut(s)	140, 1313, 1576
BanII	GRGCYC	2 cut(s)	929, 1653
BbrPI	CACGTG	2 cut(s)	567, 1552
BbsI	GAAGAC	4 cut(s)	790, 987, 1295, 1518
Bbv12I	GWGCWC	3 cut(s)	929, 1653, 1689
BbvCI	CCTCAGC	1 cut(s)	1929
BbvI	GCAGC	6 cut(s)	62, 76, 100, 641, 730, 1443
BccI	CCATC	5 cut(s)	188, 287, 1514, 1801, 1927
BceAI	ACGGC	7 cut(s)	139, 154, 469, 836, 1111, 1124, 1141
BcgI	CGANNNNNNTGC	4 cut(s)	934, 968, 1607, 1641
BciT130I	CCWGG	4 cut(s)	410, 524, 1445, 1796
BclI	TGATCA	1 cut(s)	1602
BcoDI	GTCTC	5 cut(s)	37, 747, 753, 833, 1174
BcuI	ACTAGT	1 cut(s)	43
BfaI	CTAG	5 cut(s)	44, 77, 560, 1356, 1907
BfmI	CTRYAG	2 cut(s)	716, 1052
BfoI	RGCGCY	2 cut(s)	1317, 1580
BfuAI	ACCTGC	2 cut(s)	555, 1059
BglI	GCCNNNNNGGC	1 cut(s)	524
BlpI	GCTNAGC	1 cut(s)	1812
Bme1390I	CCNGG	4 cut(s)	410, 524, 1445, 1796
Bme18I	GGWCC	1 cut(s)	1792
BmgBI	CACGTC	1 cut(s)	1162
BmgT120I	GGNCC	3 cut(s)	412, 1059, 1792
BmiI	GGNNCC	8 cut(s)	142, 229, 684, 1099, 1315, 1578, 1764, 1917
BmrFI	CCNGG	4 cut(s)	410, 524, 1445, 1796
BmrI	ACTGGG	1 cut(s)	1921
BmsI	GCATC	5 cut(s)	491, 546, 822, 1438, 1915
BmuI	ACTGGG	1 cut(s)	1921
BpiI	GAAGAC	4 cut(s)	790, 987, 1295, 1518
Bpu10I	CCTNAGC	1 cut(s)	1929
Bpu1102I	GCTNAGC	1 cut(s)	1812
BpuEI	CTTGAG	3 cut(s)	347, 1477, 1851
BsaAI	YACGTR	2 cut(s)	567, 1552
BsaHI	GRCGYC	7 cut(s)	270, 390, 807, 877, 1031, 1314, 1577
BsaI	GGTCTC	1 cut(s)	37
BsaJI	CCNNGG	6 cut(s)	223, 409, 483, 522, 1246, 1464
BsaWI	WCCGGW	1 cut(s)	929
Bsc4I	CCNNNNNNNGG	5 cut(s)	484, 770, 773, 1057, 1713
Bse118I	RCCGGY	2 cut(s)	533, 1367
Bse1I	ACTGG	2 cut(s)	684, 1916
Bse3DI	GCAATG	1 cut(s)	1691
BseBI	CCWGG	4 cut(s)	410, 524, 1445, 1796
BseDI	CCNNGG	6 cut(s)	223, 409, 483, 522, 1246, 1464
BseGI	GGATG	1 cut(s)	1453
BseLI	CCNNNNNNNGG	5 cut(s)	484, 770, 773, 1057, 1713
BseMI	GCAATG	1 cut(s)	1691
BseMII	CTCAG	3 cut(s)	1826, 1853, 1920
BseNI	ACTGG	2 cut(s)	684, 1916
BseRI	GAGGAG	6 cut(s)	212, 726, 821, 824, 827, 1090
BseXI	GCAGC	6 cut(s)	62, 76, 100, 641, 730, 1443
BseYI	CCCAGC	1 cut(s)	339
Bsh1285I	CGRYCG	1 cut(s)	460
BshFI	GGCC	6 cut(s)	414, 477, 527, 1061, 1136, 1367
BshNI	GGYRCC	3 cut(s)	140, 1313, 1576
BsiEI	CGRYCG	1 cut(s)	460
BsiHKAI	GWGCWC	3 cut(s)	929, 1653, 1689
BsiSI	CCGG	6 cut(s)	327, 534, 930, 1173, 1368, 1580
BslFI	GGGAC	6 cut(s)	290, 415, 476, 584, 1754, 1891
BslI	CCNNNNNNNGG	5 cut(s)	484, 770, 773, 1057, 1713
BsmAI	GTCTC	5 cut(s)	37, 747, 753, 833, 1174
BsmBI	CGTCTC	2 cut(s)	747, 753
BsmFI	GGGAC	6 cut(s)	290, 415, 476, 584, 1754, 1891
BsnI	GGCC	6 cut(s)	414, 477, 527, 1061, 1136, 1367
Bso31I	GGTCTC	1 cut(s)	37
Bsp1286I	GDGCHC	3 cut(s)	929, 1653, 1689
Bsp143I	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
Bsp1720I	GCTNAGC	1 cut(s)	1812
BspANI	GGCC	6 cut(s)	414, 477, 527, 1061, 1136, 1367
BspCNI	CTCAG	3 cut(s)	1825, 1852, 1921
BspLI	GGNNCC	8 cut(s)	142, 229, 684, 1099, 1315, 1578, 1764, 1917
BspMAI	CTGCAG	2 cut(s)	720, 1056
BspMI	ACCTGC	2 cut(s)	555, 1059
BspPI	GGATC	6 cut(s)	1208, 1757, 1770, 1910, 1923, 1941
BspQI	GCTCTTC	3 cut(s)	784, 1660, 1677
BspT107I	GGYRCC	3 cut(s)	140, 1313, 1576
BspTNI	GGTCTC	1 cut(s)	37
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	1 cut(s)	1691
BsrFI	RCCGGY	2 cut(s)	533, 1367
BsrI	ACTGG	2 cut(s)	684, 1916
BssAI	RCCGGY	2 cut(s)	533, 1367
BssECI	CCNNGG	6 cut(s)	223, 409, 483, 522, 1246, 1464
BssMI	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
BssNI	GRCGYC	7 cut(s)	270, 390, 807, 877, 1031, 1314, 1577
BssT1I	CCWWGG	3 cut(s)	483, 1246, 1464
Bst2UI	CCWGG	4 cut(s)	410, 524, 1445, 1796
Bst4CI	ACNGT	2 cut(s)	472, 1850
Bst6I	CTCTTC	5 cut(s)	714, 784, 866, 1660, 1677
BstACI	GRCGYC	7 cut(s)	270, 390, 807, 877, 1031, 1314, 1577
BstAPI	GCANNNNNTGC	1 cut(s)	1693
BstBAI	YACGTR	2 cut(s)	567, 1552
BstC8I	GCNNGC	6 cut(s)	508, 535, 627, 887, 1004, 1818
BstDEI	CTNAG	5 cut(s)	1812, 1821, 1839, 1929, 1937
BstF5I	GGATG	1 cut(s)	1453
BstH2I	RGCGCY	2 cut(s)	1317, 1580
BstHHI	GCGC	5 cut(s)	506, 1316, 1375, 1579, 1837
BstKTI	GATC	7 cut(s)	1185, 1203, 1605, 1765, 1845, 1918, 1936
BstMAI	GTCTC	5 cut(s)	37, 747, 753, 833, 1174
BstMBI	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
BstMCI	CGRYCG	1 cut(s)	460
BstNI	CCWGG	4 cut(s)	410, 524, 1445, 1796
BstSCI	CCNGG	4 cut(s)	408, 522, 1443, 1794
BstSFI	CTRYAG	2 cut(s)	716, 1052
BstV1I	GCAGC	6 cut(s)	62, 76, 100, 641, 730, 1443
BstV2I	GAAGAC	4 cut(s)	790, 987, 1295, 1518
BstX2I	RGATCY	3 cut(s)	1762, 1915, 1933
BstYI	RGATCY	3 cut(s)	1762, 1915, 1933
BsuRI	GGCC	6 cut(s)	414, 477, 527, 1061, 1136, 1367
BtgZI	GCGATG	1 cut(s)	265
BtrI	CACGTC	1 cut(s)	1162
BtsCI	GGATG	1 cut(s)	1453
BtsIMutI	CAGTG	1 cut(s)	468
BveI	ACCTGC	2 cut(s)	555, 1059
Cac8I	GCNNGC	6 cut(s)	508, 535, 627, 887, 1004, 1818
CfoI	GCGC	5 cut(s)	506, 1316, 1375, 1579, 1837
Cfr10I	RCCGGY	2 cut(s)	533, 1367
Cfr13I	GGNCC	3 cut(s)	412, 1059, 1792
CseI	GACGC	7 cut(s)	379, 584, 796, 885, 905, 1039, 1228
Csp6I	GTAC	3 cut(s)	1560, 1585, 1783
CviAII	CATG	5 cut(s)	59, 436, 1332, 1363, 1573
CviQI	GTAC	3 cut(s)	1560, 1585, 1783
DdeI	CTNAG	5 cut(s)	1812, 1821, 1839, 1929, 1937
DinI	GGCGCC	2 cut(s)	1315, 1578
DpnI	GATC	7 cut(s)	1184, 1202, 1604, 1764, 1844, 1917, 1935
DpnII	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
DraIII	CACNNNGTG	1 cut(s)	1555
DrdI	GACNNNNNNGTC	3 cut(s)	128, 296, 1166
DseDI	GACNNNNNNGTC	3 cut(s)	128, 296, 1166
EaeI	YGGCCR	1 cut(s)	1365
Eam1104I	CTCTTC	5 cut(s)	714, 784, 866, 1660, 1677
EarI	CTCTTC	5 cut(s)	714, 784, 866, 1660, 1677
EciI	GGCGGA	3 cut(s)	241, 741, 881
Ecl136II	GAGCTC	2 cut(s)	927, 1651
Eco130I	CCWWGG	3 cut(s)	483, 1246, 1464
Eco24I	GRGCYC	2 cut(s)	929, 1653
Eco31I	GGTCTC	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	1792
Eco53kI	GAGCTC	2 cut(s)	927, 1651
Eco57I	CTGAAG	3 cut(s)	603, 1057, 1214
Eco72I	CACGTG	2 cut(s)	567, 1552
EcoICRI	GAGCTC	2 cut(s)	927, 1651
EcoO109I	RGGNCCY	1 cut(s)	412
EcoRII	CCWGG	4 cut(s)	408, 522, 1443, 1794
EcoT14I	CCWWGG	3 cut(s)	483, 1246, 1464
EcoT38I	GRGCYC	2 cut(s)	929, 1653
EgeI	GGCGCC	2 cut(s)	1315, 1578
EheI	GGCGCC	2 cut(s)	1315, 1578
ErhI	CCWWGG	3 cut(s)	483, 1246, 1464
Esp3I	CGTCTC	2 cut(s)	747, 753
FaeI	CATG	5 cut(s)	62, 439, 1335, 1366, 1576
FaiI	YATR	8 cut(s)	60, 437, 1333, 1364, 1574, 1701, 1760, 1962
FalI	AAGNNNNNCTT	2 cut(s)	782, 814
FaqI	GGGAC	6 cut(s)	290, 415, 476, 584, 1754, 1891
FatI	CATG	5 cut(s)	58, 435, 1331, 1362, 1572
FauI	CCCGC	2 cut(s)	771, 995
FbaI	TGATCA	1 cut(s)	1602
FblI	GTMKAC	4 cut(s)	555, 1266, 1852, 1901
FokI	GGATG	1 cut(s)	1460
FriOI	GRGCYC	2 cut(s)	929, 1653
FspBI	CTAG	5 cut(s)	44, 77, 560, 1356, 1907
GlaI	GCGC	5 cut(s)	505, 1315, 1374, 1578, 1836
GsaI	CCCAGC	1 cut(s)	343
HaeII	RGCGCY	2 cut(s)	1317, 1580
HaeIII	GGCC	6 cut(s)	414, 477, 527, 1061, 1136, 1367
HapII	CCGG	6 cut(s)	327, 534, 930, 1173, 1368, 1580
HgaI	GACGC	7 cut(s)	379, 584, 796, 885, 905, 1039, 1228
HhaI	GCGC	5 cut(s)	506, 1316, 1375, 1579, 1837
Hin1I	GRCGYC	7 cut(s)	270, 390, 807, 877, 1031, 1314, 1577
Hin1II	CATG	5 cut(s)	62, 439, 1335, 1366, 1576
Hin6I	GCGC	5 cut(s)	504, 1314, 1373, 1577, 1835
HinP1I	GCGC	5 cut(s)	504, 1314, 1373, 1577, 1835
HincII	GTYRAC	3 cut(s)	313, 1853, 1902
HindII	GTYRAC	3 cut(s)	313, 1853, 1902
HindIII	AAGCTT	1 cut(s)	1869
HpaII	CCGG	6 cut(s)	327, 534, 930, 1173, 1368, 1580
HphI	GGTGA	6 cut(s)	409, 723, 832, 944, 1159, 1688
Hpy166II	GTNNAC	7 cut(s)	313, 556, 618, 1243, 1267, 1853, 1902
Hpy188III	TCNNGA	4 cut(s)	364, 1230, 1659, 1907
Hpy8I	GTNNAC	7 cut(s)	313, 556, 618, 1243, 1267, 1853, 1902
HpyAV	CCTTC	5 cut(s)	676, 711, 1290, 1718, 1776
HpyCH4III	ACNGT	2 cut(s)	472, 1850
HpyCH4IV	ACGT	5 cut(s)	129, 270, 566, 1161, 1551
HpyCH4V	TGCA	9 cut(s)	50, 58, 135, 156, 439, 718, 1054, 1451, 1628
HpyF3I	CTNAG	5 cut(s)	1812, 1821, 1839, 1929, 1937
HpySE526I	ACGT	5 cut(s)	129, 270, 566, 1161, 1551
Hsp92I	GRCGYC	7 cut(s)	270, 390, 807, 877, 1031, 1314, 1577
Hsp92II	CATG	5 cut(s)	62, 439, 1335, 1366, 1576
HspAI	GCGC	5 cut(s)	504, 1314, 1373, 1577, 1835
KasI	GGCGCC	2 cut(s)	1313, 1576
KroI	GCCGGC	1 cut(s)	533
KroNI	GCCGGC	1 cut(s)	535
Ksp22I	TGATCA	1 cut(s)	1602
Kzo9I	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
LguI	GCTCTTC	3 cut(s)	784, 1660, 1677
Lsp1109I	GCAGC	6 cut(s)	62, 76, 100, 641, 730, 1443
LweI	GCATC	5 cut(s)	491, 546, 822, 1438, 1915
MaeI	CTAG	5 cut(s)	44, 77, 560, 1356, 1907
MaeII	ACGT	5 cut(s)	129, 270, 566, 1161, 1551
MaeIII	GTNAC	4 cut(s)	562, 932, 1358, 1950
MalI	GATC	7 cut(s)	1184, 1202, 1604, 1764, 1844, 1917, 1935
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
MflI	RGATCY	3 cut(s)	1762, 1915, 1933
MhlI	GDGCHC	3 cut(s)	929, 1653, 1689
MluCI	AATT	7 cut(s)	1011, 1040, 1067, 1390, 1474, 1746, 1957
Mly113I	GGCGCC	2 cut(s)	1314, 1577
MlyI	GAGTC	6 cut(s)	623, 1031, 1218, 1712, 1873, 1897
MmeI	TCCRAC	8 cut(s)	291, 399, 807, 996, 1107, 1236, 1482, 1626
MroNI	GCCGGC	1 cut(s)	533
MseI	TTAA	3 cut(s)	1008, 1409, 1749
MspA1I	CMGCKG	2 cut(s)	53, 1002
MspI	CCGG	6 cut(s)	327, 534, 930, 1173, 1368, 1580
MspR9I	CCNGG	4 cut(s)	410, 524, 1445, 1796
MvaI	CCWGG	4 cut(s)	410, 524, 1445, 1796
NaeI	GCCGGC	1 cut(s)	535
NarI	GGCGCC	2 cut(s)	1314, 1577
NdeII	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
NgoMIV	GCCGGC	1 cut(s)	533
NlaIII	CATG	5 cut(s)	62, 439, 1335, 1366, 1576
NlaIV	GGNNCC	8 cut(s)	142, 229, 684, 1099, 1315, 1578, 1764, 1917
NmeAIII	GCCGAG	2 cut(s)	204, 792
NmuCI	GTSAC	4 cut(s)	562, 932, 1358, 1950
PciSI	GCTCTTC	3 cut(s)	784, 1660, 1677
PcsI	WCGNNNNNNNCGW	4 cut(s)	633, 1101, 1128, 1137
PdiI	GCCGGC	1 cut(s)	535
PfeI	GAWTC	5 cut(s)	1079, 1089, 1233, 1891, 1943
PfoI	TCCNGGA	1 cut(s)	1443
PleI	GAGTC	6 cut(s)	622, 1030, 1218, 1711, 1873, 1897
PluTI	GGCGCC	2 cut(s)	1317, 1580
PmaCI	CACGTG	2 cut(s)	567, 1552
PmlI	CACGTG	2 cut(s)	567, 1552
PpsI	GAGTC	6 cut(s)	622, 1030, 1218, 1711, 1873, 1897
Ppu21I	YACGTR	2 cut(s)	567, 1552
PshBI	ATTAAT	1 cut(s)	1409
Psp124BI	GAGCTC	2 cut(s)	929, 1653
Psp6I	CCWGG	4 cut(s)	408, 522, 1443, 1794
PspCI	CACGTG	2 cut(s)	567, 1552
PspFI	CCCAGC	1 cut(s)	339
PspGI	CCWGG	4 cut(s)	408, 522, 1443, 1794
PspN4I	GGNNCC	8 cut(s)	142, 229, 684, 1099, 1315, 1578, 1764, 1917
PspPI	GGNCC	3 cut(s)	412, 1059, 1792
PstI	CTGCAG	2 cut(s)	720, 1056
PsuI	RGATCY	3 cut(s)	1762, 1915, 1933
PvuII	CAGCTG	1 cut(s)	53
RsaI	GTAC	3 cut(s)	1561, 1586, 1784
RsaNI	GTAC	3 cut(s)	1560, 1585, 1783
SacI	GAGCTC	2 cut(s)	929, 1653
SalI	GTCGAC	2 cut(s)	1851, 1900
SapI	GCTCTTC	3 cut(s)	784, 1660, 1677
SaqAI	TTAA	3 cut(s)	1008, 1409, 1749
Sau3AI	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
Sau96I	GGNCC	3 cut(s)	412, 1059, 1792
SchI	GAGTC	6 cut(s)	623, 1031, 1218, 1712, 1873, 1897
ScrFI	CCNGG	4 cut(s)	410, 524, 1445, 1796
SduI	GDGCHC	3 cut(s)	929, 1653, 1689
SfaNI	GCATC	5 cut(s)	491, 546, 822, 1438, 1915
SfcI	CTRYAG	2 cut(s)	716, 1052
SfoI	GGCGCC	2 cut(s)	1315, 1578
SinI	GGWCC	1 cut(s)	1792
SmlI	CTYRAG	3 cut(s)	362, 1456, 1866
SmoI	CTYRAG	3 cut(s)	362, 1456, 1866
SpeI	ACTAGT	1 cut(s)	43
Sse9I	AATT	7 cut(s)	1011, 1040, 1067, 1390, 1474, 1746, 1957
SspDI	GGCGCC	2 cut(s)	1313, 1576
SspMI	CTAG	5 cut(s)	44, 77, 560, 1356, 1907
SstI	GAGCTC	2 cut(s)	929, 1653
StyD4I	CCNGG	4 cut(s)	408, 522, 1443, 1794
StyI	CCWWGG	3 cut(s)	483, 1246, 1464
TaaI	ACNGT	2 cut(s)	472, 1850
TaiI	ACGT	5 cut(s)	132, 273, 569, 1164, 1554
TaqI	TCGA	7 cut(s)	93, 1122, 1497, 1617, 1805, 1852, 1901
TaqII	GACCGA	2 cut(s)	474, 1469
TasI	AATT	7 cut(s)	1011, 1040, 1067, 1390, 1474, 1746, 1957
TatI	WGTACW	1 cut(s)	1584
TauI	GCSGC	9 cut(s)	287, 521, 530, 533, 757, 777, 882, 885, 1139
TfiI	GAWTC	5 cut(s)	1079, 1089, 1233, 1891, 1943
Tru1I	TTAA	3 cut(s)	1008, 1409, 1749
Tru9I	TTAA	3 cut(s)	1008, 1409, 1749
TscAI	CASTG	1 cut(s)	475
TseFI	GTSAC	4 cut(s)	562, 932, 1358, 1950
TseI	GCWGC	6 cut(s)	50, 64, 88, 629, 718, 1431
Tsp45I	GTSAC	4 cut(s)	562, 932, 1358, 1950
TspDTI	ATGAA	4 cut(s)	17, 23, 790, 1695
TspGWI	ACGGA	4 cut(s)	729, 735, 1093, 1611
TspRI	CASTG	1 cut(s)	475
VpaK11BI	GGWCC	1 cut(s)	1792
VspI	ATTAAT	1 cut(s)	1409
XapI	RAATTY	1 cut(s)	1040
XbaI	TCTAGA	1 cut(s)	1906
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1480
XmiI	GTMKAC	4 cut(s)	555, 1266, 1852, 1901
XspI	CTAG	5 cut(s)	44, 77, 560, 1356, 1907
ZraI	GACGTC	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.