Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0008355

Physical Location & Seq

Genomic Coordinates Reverse (-)

33389850 .. 33392322

Gene Structure 2473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G026310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGAAGATGCAGATGATGCTGTTAATGGTTATGGTGGTCTCTCTTTTAGTTGCAGTCGTGCATGGGCAGCAGAGCTACTTGGAAAACAACCAGCTCGACTGCGACAACGACTCCAACATCACCGCCGGCTACATCTGCAACGGCGCCGCTCCCTCATGCGCCTCCTACGTCACTTTCCTCTCCATCAGCCACTACAACACCCCCACATCAATCGCCTCCCTCCTCGGCTCCACCCCCTCCGACATCGCCGCCGCCAACAACATCTCCGACGTCGACCCCATCCCCACCGACACCTCCGTCCTTGTCCCCCTCAACTGCTCCTGCTCCGGCCCCTACTCCCAGCACAACGTCTCCTACACCCTGAAGCCCGACGACGACTACTTCGTCATCGCCAACAACACCTACCAGGGACTCACGACCTGTCAGGCCCTCAGGCATCAGAACCCCTACGACCCTCTGAACCTCGAGGGCGGCCTTGTCATAGAGGTGCCGATCAGGTGTGCTTGCCCCACCGCCAAACAGACTGCCGCCGGGATCAAGTACCTGCTGGCCTACCTCATCGACTTGGAAGACGATCTCGACAAAATCGCCATACGCTTCGCCGTAGATGTACCCACTTTGCTCGAAGCAAACAACTTTAAGACCTCCGACGACGTCATCTATCCCTACCAAGCTGTTCTAGTTCCTCTCAAAACCAAACCTTCTCCTCTTCAACTGAAGTATCCAAGCTCTCCTCCACCTCCGCCTTCTCCTCCTCCTCCTCTGCCGCCTTCATCACCAGCGCCTCCCTCACCACCAAGTGGGTCTTCCAACAAGAAGTGGGTCTTCATCGGCGTTGGCGTCGGAGCTGCCTGTCTCCTCCTACTTATATCTATCCTCGCCTTCCTCTTCTTGTCAAAACGACGACGCCGTCAGCACCGGCGCCACTCTTCCAACCACAAATTAAAAAGCTCCGGTAATAACACGCAGAACTCGCTACCCACCACCACCACCACCACCTCCAACGACACAACAACATCGTGGTCGCCAATATCCACCAACGGGCTTAAAAACGCAGTGGAGTCTTTGACAGCTTACAAGTTCGAAGACCTGCAGAACGCCACTCAATTCTTCAACGAAGCCAACAGAATCGCCGGCTCCTCTGTCTTCAGAGCTACCTTTGACGGCGAAGATGCTGCCGTTAAGGTGATGACATGCAACTTGTCCCTCTCCGCGGACGAGATCAACATACTAAAGCGGATCAACCACTCCAACATTATCAGTCTCTCAGGATTCTGTGTCCACAAAGGAAACACATACCTCGTCTACGAGTTTGCTCCTTCTGGCTCACTCATTGATTGTCTTGGGTTGAAGGGCAACATTACTCCTCTGTCATGGAAGCAGAGAGTTCACATTGCTAATGACGTGGCCAATGCGCTCAACTATCTACACAACTTCACACAACCTCCATTAATCCACAAGAACCTGAACACCAGCAACATTCTCCTGGATGCAAACTTGAGAGCCAAGGTTGCCAATTTCGGTCTGGCAAGAGCAGTGGATTTGGGGAAGGAAGTCGAAGATGGAGGACATGGATTTCAACTGACGAGACATGTGGTGGGTACACGGGGCTACATGGCGCCGGAGTACACGGAAGACGGCGTGATTACTCCGAAACTGGATGTGTTTGCATTTGGGGTTGTGTTGTTGGAGCTATTGTCCGGAAGACCAGCCTCAGGTGATGACGAATACACGTTGCTCTATTCATCCATTAGTGGGGTGCTTGAAGGAGATCATGTGGGGGACAAAATTAAAGGGTTTATGGATCCTTCTCTGAGGCGCCAGTATCCTTTGGAGCTGGCGTTTTCAATGGCTCAGCTCGCTAAGAGCTGCGTTGCGCCTCAGATCAACTCACGACCCACCATGGCTCAAGCTTCTGGTACTCTATCTAAGATTCTTTCGTCAACTCTCGACTGGGATTCATCTAAGGCTGTGGATCTTGAACATTCAAGGTCACTGAGTCATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009719 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

670

Amino Acids

72.62

Weight (kDa)

6.38

Isoelectric Point (pI)

47.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	52 - 108	5.3e-17	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	112 - 166	1.2e-24	LYK3/4/5 LysM2 domain
LysM2_NFP	PF23457	113 - 165	2.6e-07	NFP LysM2 domain
LysM3_LYK4_5	PF23473	181 - 230	4.8e-12	LYK4/5 LysM3 domain
Pkinase	PF00069	388 - 638	4.7e-35	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	390 - 638	2.4e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33580
fragaria_vesca	FvH4_5g26710 FvH4_5g26740
prunus_persica	Prupe.5G001000_v2.0.a1
pyrus_communis	pycom16g26340
rosa_chinensis	RchiOBHm_Chr7g0217591 RchiOBHm_Chr7g0217601
rosa_laevigata	RLG00000002457 RLG00000002458
rosa_multiflora	Rmu_co8386267.1_g000001 Rmu_sc0006161.1_g000002 Rmu_ssc0000225.1_g000002
rosa_roxburghii	Rroxscaffold_3G00241810 Rroxscaffold_3G00241840
rosa_rugosa	Rorug07G0170300 Rorug07G0170300
rosa_samantha	Rh7AG310400 Rh7BG301700 Rh7CG329400 Rh7DG309800 Rh7DG310500
rosa_wichuraiana	Rw7G026310 Rw7G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	296, 383, 909
AatII	GACGTC	2 cut(s)	273, 657
AbsI	CCTCGAGG	1 cut(s)	464
Acc36I	ACCTGC	2 cut(s)	552, 1098
AccB1I	GGYRCC	5 cut(s)	143, 487, 921, 1618, 1818
AccB7I	CCANNNNNTGG	1 cut(s)	800
AccBSI	CCGCTC	1 cut(s)	149
AccI	GTMKAC	2 cut(s)	273, 1305
AccII	CGCG	1 cut(s)	1214
AccIII	TCCGGA	1 cut(s)	1700
AclWI	GGATC	5 cut(s)	542, 1247, 1799, 1812, 1983
AcoI	YGGCCR	1 cut(s)	1407
AcuI	CTGAAG	3 cut(s)	383, 737, 1132
AcyI	GRCGYC	8 cut(s)	144, 270, 654, 840, 907, 922, 1619, 1819
AdeI	CACNNNGTG	1 cut(s)	800
AfaI	GTAC	5 cut(s)	542, 612, 1603, 1628, 1921
AfiI	CCNNNNNNNGG	5 cut(s)	800, 1041, 1213, 1715, 1755
AflIII	ACRYGT	2 cut(s)	1591, 1731
AgsI	TTSAA	8 cut(s)	713, 1114, 1351, 1580, 1766, 1848, 1982, 1989
AjiI	CACGTC	1 cut(s)	1405
AjnI	CCWGG	2 cut(s)	405, 1485
AjuI	GAANNNNNNNTTGG	2 cut(s)	790, 822
Alw26I	GTCTC	5 cut(s)	43, 355, 860, 1268, 1582
AlwI	GGATC	5 cut(s)	542, 1247, 1799, 1812, 1983
Ama87I	CYCGRG	1 cut(s)	464
Aor13HI	TCCGGA	1 cut(s)	1700
AoxI	GGCC	5 cut(s)	328, 426, 472, 549, 1407
ApeKI	GCWGC	4 cut(s)	67, 848, 1175, 1869
ArsI	GACNNNNNNTTYG	2 cut(s)	365, 397
AseI	ATTAAT	1 cut(s)	1451
AspLEI	GCGC	8 cut(s)	146, 161, 784, 924, 1417, 1621, 1821, 1879
AspS9I	GGNCC	2 cut(s)	329, 427
AsuC2I	CCSGG	1 cut(s)	532
AsuHPI	GGTGA	5 cut(s)	112, 768, 783, 1198, 1730
AsuII	TTCGAA	1 cut(s)	1083
AvaI	CYCGRG	1 cut(s)	464
AxyI	CCTNAGG	2 cut(s)	431, 1714
BaeI	ACNNNNGTAYC	2 cut(s)	704, 737
BalI	TGGCCA	1 cut(s)	1409
BamHI	GGATCC	1 cut(s)	1804
BanI	GGYRCC	5 cut(s)	143, 487, 921, 1618, 1818
BbsI	GAAGAC	7 cut(s)	576, 798, 817, 1092, 1138, 1641, 1711
BbvI	GCAGC	4 cut(s)	79, 835, 1162, 1856
BccI	CCATC	3 cut(s)	191, 287, 1556
BceAI	ACGGC	6 cut(s)	157, 587, 894, 1163, 1180, 1654
BcgI	CGANNNNNNTGC	2 cut(s)	1157, 1191
BciT130I	CCWGG	2 cut(s)	407, 1487
BciVI	GTATCC	2 cut(s)	732, 1836
BcnI	CCSGG	1 cut(s)	532
BcoDI	GTCTC	5 cut(s)	43, 355, 860, 1268, 1582
BfaI	CTAG	1 cut(s)	680
BfmI	CTRYAG	1 cut(s)	1091
BfoI	RGCGCY	5 cut(s)	147, 785, 925, 1622, 1822
BfuAI	ACCTGC	2 cut(s)	552, 1098
BfuI	GTATCC	2 cut(s)	732, 1836
BlpI	GCTNAGC	1 cut(s)	1854
Bme1390I	CCNGG	3 cut(s)	407, 532, 1487
BmeT110I	CYCGRG	1 cut(s)	464
BmgBI	CACGTC	1 cut(s)	1405
BmgT120I	GGNCC	2 cut(s)	329, 427
BmiI	GGNNCC	9 cut(s)	145, 229, 331, 489, 923, 1138, 1620, 1806, 1820
BmrFI	CCNGG	3 cut(s)	407, 532, 1487
BmrI	ACTGGG	1 cut(s)	1963
BmsI	GCATC	4 cut(s)	6, 445, 1162, 1480
BmuI	ACTGGG	1 cut(s)	1963
BpiI	GAAGAC	7 cut(s)	576, 798, 817, 1092, 1138, 1641, 1711
Bpu1102I	GCTNAGC	1 cut(s)	1854
Bpu14I	TTCGAA	1 cut(s)	1083
BpuEI	CTTGAG	2 cut(s)	1519, 1893
BpuMI	CCSGG	1 cut(s)	532
BsaHI	GRCGYC	8 cut(s)	144, 270, 654, 840, 907, 922, 1619, 1819
BsaI	GGTCTC	1 cut(s)	43
BsaJI	CCNNGG	5 cut(s)	223, 406, 1212, 1506, 1902
BsaWI	WCCGGW	2 cut(s)	953, 1700
Bsc4I	CCNNNNNNNGG	5 cut(s)	800, 1041, 1213, 1715, 1755
Bse118I	RCCGGY	3 cut(s)	125, 918, 1133
Bse1I	ACTGG	3 cut(s)	1662, 1822, 1958
Bse21I	CCTNAGG	2 cut(s)	431, 1714
Bse3DI	GCAATG	1 cut(s)	1392
BseAI	TCCGGA	1 cut(s)	1700
BseBI	CCWGG	2 cut(s)	407, 1487
BseDI	CCNNGG	5 cut(s)	223, 406, 1212, 1506, 1902
BseGI	GGATG	4 cut(s)	279, 1495, 1666, 1745
BseLI	CCNNNNNNNGG	5 cut(s)	800, 1041, 1213, 1715, 1755
BseMI	GCAATG	1 cut(s)	1392
BseMII	CTCAG	7 cut(s)	445, 1281, 1728, 1805, 1868, 1895, 1988
BseNI	ACTGG	3 cut(s)	1662, 1822, 1958
BseXI	GCAGC	4 cut(s)	79, 835, 1162, 1856
BseYI	CCCAGC	1 cut(s)	339
Bsh1236I	CGCG	1 cut(s)	1214
BshFI	GGCC	5 cut(s)	330, 428, 474, 551, 1409
BshNI	GGYRCC	5 cut(s)	143, 487, 921, 1618, 1818
BsiHKCI	CYCGRG	1 cut(s)	464
BsiSI	CCGG	8 cut(s)	126, 327, 531, 919, 954, 1134, 1622, 1701
BslFI	GGGAC	4 cut(s)	290, 423, 1189, 1796
BslI	CCNNNNNNNGG	5 cut(s)	800, 1041, 1213, 1715, 1755
BsmAI	GTCTC	5 cut(s)	43, 355, 860, 1268, 1582
BsmBI	CGTCTC	1 cut(s)	355
BsmFI	GGGAC	4 cut(s)	290, 423, 1189, 1796
BsnI	GGCC	5 cut(s)	330, 428, 474, 551, 1409
Bso31I	GGTCTC	1 cut(s)	43
BsoBI	CYCGRG	1 cut(s)	464
Bsp119I	TTCGAA	1 cut(s)	1083
Bsp13I	TCCGGA	1 cut(s)	1700
Bsp143I	GATC	9 cut(s)	492, 534, 574, 1221, 1239, 1771, 1804, 1884, 1975
Bsp1720I	GCTNAGC	1 cut(s)	1854
Bsp19I	CCATGG	1 cut(s)	1902
BspANI	GGCC	5 cut(s)	330, 428, 474, 551, 1409
BspCNI	CTCAG	7 cut(s)	444, 1280, 1727, 1806, 1867, 1894, 1989
BspEI	TCCGGA	1 cut(s)	1700
BspFNI	CGCG	1 cut(s)	1214
BspLI	GGNNCC	9 cut(s)	145, 229, 331, 489, 923, 1138, 1620, 1806, 1820
BspMAI	CTGCAG	1 cut(s)	1095
BspMI	ACCTGC	2 cut(s)	552, 1098
BspPI	GGATC	5 cut(s)	542, 1247, 1799, 1812, 1983
BspT104I	TTCGAA	1 cut(s)	1083
BspT107I	GGYRCC	5 cut(s)	143, 487, 921, 1618, 1818
BspTNI	GGTCTC	1 cut(s)	43
BsrBI	CCGCTC	1 cut(s)	149
BsrDI	GCAATG	1 cut(s)	1392
BsrFI	RCCGGY	3 cut(s)	125, 918, 1133
BsrI	ACTGG	3 cut(s)	1662, 1822, 1958
BssAI	RCCGGY	3 cut(s)	125, 918, 1133
BssECI	CCNNGG	5 cut(s)	223, 406, 1212, 1506, 1902
BssMI	GATC	9 cut(s)	492, 534, 574, 1221, 1239, 1771, 1804, 1884, 1975
BssNI	GRCGYC	8 cut(s)	144, 270, 654, 840, 907, 922, 1619, 1819
BssT1I	CCWWGG	2 cut(s)	1506, 1902
Bst2UI	CCWGG	2 cut(s)	407, 1487
Bst6I	CTCTTC	3 cut(s)	714, 893, 934
BstACI	GRCGYC	8 cut(s)	144, 270, 654, 840, 907, 922, 1619, 1819
BstAPI	GCANNNNNTGC	1 cut(s)	16
BstBI	TTCGAA	1 cut(s)	1083
BstC8I	GCNNGC	6 cut(s)	127, 505, 549, 1135, 1839, 1860
BstDSI	CCRYGG	2 cut(s)	1212, 1902
BstF5I	GGATG	4 cut(s)	279, 1495, 1666, 1745
BstFNI	CGCG	1 cut(s)	1214
BstH2I	RGCGCY	5 cut(s)	147, 785, 925, 1622, 1822
BstHHI	GCGC	8 cut(s)	146, 161, 784, 924, 1417, 1621, 1821, 1879
BstKTI	GATC	9 cut(s)	495, 537, 577, 1224, 1242, 1774, 1807, 1887, 1978
BstMAI	GTCTC	5 cut(s)	43, 355, 860, 1268, 1582
BstMBI	GATC	9 cut(s)	492, 534, 574, 1221, 1239, 1771, 1804, 1884, 1975
BstMWI	GCNNNNNNNGC	6 cut(s)	16, 67, 135, 973, 1511, 1859
BstNI	CCWGG	2 cut(s)	407, 1487
BstNSI	RCATGY	2 cut(s)	1197, 1595
BstSCI	CCNGG	3 cut(s)	405, 530, 1485
BstSFI	CTRYAG	1 cut(s)	1091
BstUI	CGCG	1 cut(s)	1214
BstV1I	GCAGC	4 cut(s)	79, 835, 1162, 1856
BstV2I	GAAGAC	7 cut(s)	576, 798, 817, 1092, 1138, 1641, 1711
BstX2I	RGATCY	2 cut(s)	1804, 1975
BstYI	RGATCY	2 cut(s)	1804, 1975
Bsu36I	CCTNAGG	2 cut(s)	431, 1714
BsuI	GTATCC	2 cut(s)	732, 1836
BsuRI	GGCC	5 cut(s)	330, 428, 474, 551, 1409
BtgI	CCRYGG	2 cut(s)	1212, 1902
BtgZI	GCGATG	2 cut(s)	229, 373
BtrI	CACGTC	1 cut(s)	1405
BtsCI	GGATG	4 cut(s)	279, 1495, 1666, 1745
BtsI	GCAGTG	2 cut(s)	1062, 1542
BtsIMutI	CAGTG	3 cut(s)	1062, 1542, 1994
BveI	ACCTGC	2 cut(s)	552, 1098
Cac8I	GCNNGC	6 cut(s)	127, 505, 549, 1135, 1839, 1860
CfoI	GCGC	8 cut(s)	146, 161, 784, 924, 1417, 1621, 1821, 1879
Cfr10I	RCCGGY	3 cut(s)	125, 918, 1133
Cfr13I	GGNCC	2 cut(s)	329, 427
Cfr42I	CCGCGG	1 cut(s)	1215
CseI	GACGC	2 cut(s)	829, 915
Csp6I	GTAC	5 cut(s)	541, 611, 1602, 1627, 1920
CspCI	CAANNNNNGTGG	2 cut(s)	1518, 1553
CviQI	GTAC	5 cut(s)	541, 611, 1602, 1627, 1920
DinI	GGCGCC	4 cut(s)	145, 923, 1620, 1820
DpnI	GATC	9 cut(s)	494, 536, 576, 1223, 1241, 1773, 1806, 1886, 1977
DpnII	GATC	9 cut(s)	492, 534, 574, 1221, 1239, 1771, 1804, 1884, 1975
DraIII	CACNNNGTG	1 cut(s)	800
DrdI	GACNNNNNNGTC	3 cut(s)	296, 383, 909
DseDI	GACNNNNNNGTC	3 cut(s)	296, 383, 909
EaeI	YGGCCR	1 cut(s)	1407
Eam1104I	CTCTTC	3 cut(s)	714, 893, 934
EarI	CTCTTC	3 cut(s)	714, 893, 934
EciI	GGCGGA	1 cut(s)	732
Eco130I	CCWWGG	2 cut(s)	1506, 1902
Eco31I	GGTCTC	1 cut(s)	43
Eco57I	CTGAAG	3 cut(s)	383, 737, 1132
Eco81I	CCTNAGG	2 cut(s)	431, 1714
Eco88I	CYCGRG	1 cut(s)	464
EcoO109I	RGGNCCY	1 cut(s)	427
EcoRII	CCWGG	2 cut(s)	405, 1485
EcoT14I	CCWWGG	2 cut(s)	1506, 1902
EgeI	GGCGCC	4 cut(s)	145, 923, 1620, 1820
EheI	GGCGCC	4 cut(s)	145, 923, 1620, 1820
ErhI	CCWWGG	2 cut(s)	1506, 1902
Esp3I	CGTCTC	1 cut(s)	355
FalI	AAGNNNNNCTT	4 cut(s)	790, 822, 809, 841
FaqI	GGGAC	4 cut(s)	290, 423, 1189, 1796
FblI	GTMKAC	2 cut(s)	273, 1305
FokI	GGATG	4 cut(s)	266, 1502, 1673, 1732
FspBI	CTAG	1 cut(s)	680
GlaI	GCGC	8 cut(s)	145, 160, 783, 923, 1416, 1620, 1820, 1878
GsaI	CCCAGC	1 cut(s)	343
HaeII	RGCGCY	5 cut(s)	147, 785, 925, 1622, 1822
HaeIII	GGCC	5 cut(s)	330, 428, 474, 551, 1409
HapII	CCGG	8 cut(s)	126, 327, 531, 919, 954, 1134, 1622, 1701
HgaI	GACGC	2 cut(s)	829, 915
HhaI	GCGC	8 cut(s)	146, 161, 784, 924, 1417, 1621, 1821, 1879
Hin1I	GRCGYC	8 cut(s)	144, 270, 654, 840, 907, 922, 1619, 1819
Hin6I	GCGC	8 cut(s)	144, 159, 782, 922, 1415, 1619, 1819, 1877
HinP1I	GCGC	8 cut(s)	144, 159, 782, 922, 1415, 1619, 1819, 1877
HincII	GTYRAC	2 cut(s)	274, 1944
HindII	GTYRAC	2 cut(s)	274, 1944
HindIII	AAGCTT	1 cut(s)	1911
HinfI	GANTC	8 cut(s)	110, 411, 1061, 1128, 1272, 1933, 1958, 1999
HpaII	CCGG	8 cut(s)	126, 327, 531, 919, 954, 1134, 1622, 1701
HphI	GGTGA	5 cut(s)	112, 768, 783, 1198, 1730
Hpy166II	GTNNAC	7 cut(s)	274, 1282, 1306, 1390, 1604, 1629, 1944
Hpy188III	TCNNGA	7 cut(s)	415, 578, 1269, 1701, 1893, 1949, 1979
Hpy8I	GTNNAC	7 cut(s)	274, 1282, 1306, 1390, 1604, 1629, 1944
Hpy99I	CGWCG	9 cut(s)	272, 275, 374, 377, 653, 656, 845, 906, 909
HpyAV	CCTTC	9 cut(s)	711, 756, 780, 892, 1329, 1345, 1543, 1760, 1818
HpyCH4IV	ACGT	6 cut(s)	168, 270, 348, 654, 1404, 1733
HpyCH4V	TGCA	8 cut(s)	10, 53, 61, 138, 1093, 1197, 1493, 1670
HpyF10VI	GCNNNNNNNGC	6 cut(s)	16, 67, 135, 973, 1511, 1859
HpySE526I	ACGT	6 cut(s)	168, 270, 348, 654, 1404, 1733
Hsp92I	GRCGYC	8 cut(s)	144, 270, 654, 840, 907, 922, 1619, 1819
HspAI	GCGC	8 cut(s)	144, 159, 782, 922, 1415, 1619, 1819, 1877
KasI	GGCGCC	4 cut(s)	143, 921, 1618, 1818
Kpn2I	TCCGGA	1 cut(s)	1700
KroI	GCCGGC	2 cut(s)	125, 1133
KroNI	GCCGGC	2 cut(s)	127, 1135
KspI	CCGCGG	1 cut(s)	1215
Kzo9I	GATC	9 cut(s)	492, 534, 574, 1221, 1239, 1771, 1804, 1884, 1975
Lsp1109I	GCAGC	4 cut(s)	79, 835, 1162, 1856
LweI	GCATC	4 cut(s)	6, 445, 1162, 1480
MaeI	CTAG	1 cut(s)	680
MaeII	ACGT	6 cut(s)	168, 270, 348, 654, 1404, 1733
MaeIII	GTNAC	2 cut(s)	169, 1992
MalI	GATC	9 cut(s)	494, 536, 576, 1223, 1241, 1773, 1806, 1886, 1977
MbiI	CCGCTC	1 cut(s)	149
MboI	GATC	9 cut(s)	492, 534, 574, 1221, 1239, 1771, 1804, 1884, 1975
MflI	RGATCY	2 cut(s)	1804, 1975
MlsI	TGGCCA	1 cut(s)	1409
MluCI	AATT	4 cut(s)	941, 1106, 1516, 1788
MluNI	TGGCCA	1 cut(s)	1409
Mly113I	GGCGCC	4 cut(s)	144, 922, 1619, 1819
MlyI	GAGTC	4 cut(s)	104, 405, 1070, 2008
Mox20I	TGGCCA	1 cut(s)	1409
MroI	TCCGGA	1 cut(s)	1700
MroNI	GCCGGC	2 cut(s)	125, 1133
MscI	TGGCCA	1 cut(s)	1409
MseI	TTAA	7 cut(s)	23, 639, 944, 1047, 1182, 1451, 1791
MslI	CAYNNNNRTG	1 cut(s)	485
Msp20I	TGGCCA	1 cut(s)	1409
MspA1I	CMGCKG	1 cut(s)	1214
MspI	CCGG	8 cut(s)	126, 327, 531, 919, 954, 1134, 1622, 1701
MspR9I	CCNGG	3 cut(s)	407, 532, 1487
MvaI	CCWGG	2 cut(s)	407, 1487
MvnI	CGCG	1 cut(s)	1214
MwoI	GCNNNNNNNGC	6 cut(s)	16, 67, 135, 973, 1511, 1859
NaeI	GCCGGC	2 cut(s)	127, 1135
NarI	GGCGCC	4 cut(s)	144, 922, 1619, 1819
NciI	CCSGG	1 cut(s)	532
NcoI	CCATGG	1 cut(s)	1902
NdeII	GATC	9 cut(s)	492, 534, 574, 1221, 1239, 1771, 1804, 1884, 1975
NgoMIV	GCCGGC	2 cut(s)	125, 1133
NlaIV	GGNNCC	9 cut(s)	145, 229, 331, 489, 923, 1138, 1620, 1806, 1820
NmeAIII	GCCGAG	1 cut(s)	204
NmuCI	GTSAC	2 cut(s)	169, 1992
NspI	RCATGY	2 cut(s)	1197, 1595
NspV	TTCGAA	1 cut(s)	1083
PaeR7I	CTCGAG	1 cut(s)	464
PciI	ACATGT	1 cut(s)	1591
PcsI	WCGNNNNNNNCGW	3 cut(s)	381, 837, 907
PdiI	GCCGGC	2 cut(s)	127, 1135
PfeI	GAWTC	4 cut(s)	1128, 1272, 1933, 1958
PflFI	GACNNNGTC	2 cut(s)	653, 909
PflMI	CCANNNNNTGG	1 cut(s)	800
PfoI	TCCNGGA	1 cut(s)	1485
PleI	GAGTC	4 cut(s)	104, 405, 1069, 2007
PluTI	GGCGCC	4 cut(s)	147, 925, 1622, 1822
PpsI	GAGTC	4 cut(s)	104, 405, 1069, 2007
PscI	ACATGT	1 cut(s)	1591
PshBI	ATTAAT	1 cut(s)	1451
Psp6I	CCWGG	2 cut(s)	405, 1485
PspFI	CCCAGC	1 cut(s)	339
PspGI	CCWGG	2 cut(s)	405, 1485
PspN4I	GGNNCC	9 cut(s)	145, 229, 331, 489, 923, 1138, 1620, 1806, 1820
PspPI	GGNCC	2 cut(s)	329, 427
PspXI	VCTCGAGB	1 cut(s)	464
PstI	CTGCAG	1 cut(s)	1095
PsuI	RGATCY	2 cut(s)	1804, 1975
PsyI	GACNNNGTC	2 cut(s)	653, 909
RsaI	GTAC	5 cut(s)	542, 612, 1603, 1628, 1921
RsaNI	GTAC	5 cut(s)	541, 611, 1602, 1627, 1920
RseI	CAYNNNNRTG	1 cut(s)	485
SacII	CCGCGG	1 cut(s)	1215
SalI	GTCGAC	1 cut(s)	272
SaqAI	TTAA	7 cut(s)	23, 639, 944, 1047, 1182, 1451, 1791
Sau3AI	GATC	9 cut(s)	492, 534, 574, 1221, 1239, 1771, 1804, 1884, 1975
Sau96I	GGNCC	2 cut(s)	329, 427
SchI	GAGTC	4 cut(s)	104, 405, 1070, 2008
ScrFI	CCNGG	3 cut(s)	407, 532, 1487
SfaNI	GCATC	4 cut(s)	6, 445, 1162, 1480
SfcI	CTRYAG	1 cut(s)	1091
SfoI	GGCGCC	4 cut(s)	145, 923, 1620, 1820
Sfr274I	CTCGAG	1 cut(s)	464
Sfr303I	CCGCGG	1 cut(s)	1215
SfuI	TTCGAA	1 cut(s)	1083
SgrAI	CRCCGGYG	1 cut(s)	918
SgrBI	CCGCGG	1 cut(s)	1215
SlaI	CTCGAG	1 cut(s)	464
SmiMI	CAYNNNNRTG	1 cut(s)	485
SmlI	CTYRAG	3 cut(s)	464, 1498, 1908
SmoI	CTYRAG	3 cut(s)	464, 1498, 1908
Sse9I	AATT	4 cut(s)	941, 1106, 1516, 1788
SspDI	GGCGCC	4 cut(s)	143, 921, 1618, 1818
SspMI	CTAG	1 cut(s)	680
StyD4I	CCNGG	3 cut(s)	405, 530, 1485
StyI	CCWWGG	2 cut(s)	1506, 1902
TaiI	ACGT	6 cut(s)	171, 273, 351, 657, 1407, 1736
TaqI	TCGA	9 cut(s)	96, 273, 465, 561, 579, 624, 1083, 1557, 1950
TaqII	GACCGA	1 cut(s)	1511
TasI	AATT	4 cut(s)	941, 1106, 1516, 1788
TatI	WGTACW	1 cut(s)	1626
TauI	GCSGC	6 cut(s)	149, 251, 254, 474, 530, 769
TfiI	GAWTC	4 cut(s)	1128, 1272, 1933, 1958
Tru1I	TTAA	7 cut(s)	23, 639, 944, 1047, 1182, 1451, 1791
Tru9I	TTAA	7 cut(s)	23, 639, 944, 1047, 1182, 1451, 1791
TscAI	CASTG	3 cut(s)	1062, 1542, 2001
TseFI	GTSAC	2 cut(s)	169, 1992
TseI	GCWGC	4 cut(s)	67, 848, 1175, 1869
Tsp45I	GTSAC	2 cut(s)	169, 1992
TspDTI	ATGAA	5 cut(s)	17, 762, 817, 1734, 1950
TspGWI	ACGGA	2 cut(s)	286, 1646
TspRI	CASTG	3 cut(s)	1062, 1542, 2001
Tth111I	GACNNNGTC	2 cut(s)	653, 909
Van91I	CCANNNNNTGG	1 cut(s)	800
VspI	ATTAAT	1 cut(s)	1451
XceI	RCATGY	2 cut(s)	1197, 1595
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1522
XhoI	CTCGAG	1 cut(s)	464
XmiI	GTMKAC	2 cut(s)	273, 1305
XspI	CTAG	1 cut(s)	680
ZraI	GACGTC	2 cut(s)	271, 655

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.