Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0008355

Physical Location & Seq

Genomic Coordinates Reverse (-)

36272666 .. 36275197

Gene Structure 2532 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG309800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGAAGATGAAGATGCAGATGATGCTGTTAATGGTTATGGTGGTCTCTCTTCTAGTTGCAGTCGTGCATGGGCAGCAGAGCTACTTGGAAAACAACCAGCTCGACTGCGACAACGACTCCAACATCACCGCCGGCTACATCTGCAACGGCGCCGCTCCCTCATGCGCCTCCTACGTCACTTTCCTCTCCATCAGCCACTACAACACCCCCACATCAATCGCCTCCCTCCTCGGCTCCACCCCCTCCGACATCGCCGCCGCCAACAACATCTCCGACGTCGACCCCATCCCCACCGACACCTCCGTCCTTGTCCCCCTCAACTGCTCCTGCTCCGGCCCCTACTCCCAGCACAACGTCTCCTACACCCTGAAGCCCGACGACACCTACTTCGTCATCGCCAACAACACCTACCAGGGACTCACGACCTGTCAGGCCCTCACGCATCAGAACCCCTACGACCCTCTGAACCTCGAGGGCGGCCTTGTCATAGAGGTGCCGATCAGGTGTGCTTGCCCCACCGCCAAACAGACCGCCGCCGGGATCAAGTACCTGCTGGCCTACCTCATCGACTTGGAAGACGATCTCGACAAAATCGCCATACGCTTCGCCGTAGATGTACCCACTTTGCTCGAAGCAAACAACTTTAAGACCTCCGACGACATCATCTATCCCTACCAAGCTGTTCTAGTTCCTCTCACAACCAAACCTTCTCCTCTTCAACTGAAGTATCCAAGCTCTCCTCCACCTCCGCCTTCTCCTCCTCCTCCTCTGCCGCCGTCATCACCAGCGCCTCCCTCACCACCAAGTGGGTCTTCCAACAAGAAGTGGGTCTTCATCGGCGTTGGCGTCGGAGCTGGCTGTCTCCTCCTACTTATATCTATCCTCGCCTTCCTCTTCTTGTCAAAACGACGACGCCGTCAGCACCGGCGCCACTCTCCCAACCACAAATTAAAGAGCTCCGGTGATAACACGCAGAACTCGCTACCCACCACCACCACCACCACCTCCAACGACACAACAACATCGTGGCCGCCAATATCCACCAACGGGCTTAAAAACGCAGTGGAGTCTTTGACAGCTTACAAGTTCGAAGACCTGCAGAACGCCACTCAATTCTTCGACGAAGCCAACAGAATCGCCGGCTCCTCTGTCTTCAGAGCTACCTTTGACGGCGAAGATGCTGCCGTCAAGGTGATGACAGGCGACTTGTCCCTCTCCGCCGACGAGATCAACATACTAAAGCGGATCAACCACTCCAACATTATCAGCCTCTCAGGATTCTGCGTCCACAAAGGAAACACATACCTCGTCTACGAGTTTGCTCCTTCTGGCTCACTCATTGATTGTCTTGGGTTGAAGGGCAACATTACTCCTCTGTCATGGAAGCAGAGAGTTCACATTGCTAATGACGTGGCCAATGCGCTCAACTATCTACACAACTTCACACACCCTCCATTAATCCACAAGAACCTGAACACCAGCAACATTCTCCTGGATGCAAACTTGAGAGCCAAGGTTGCCAATTTCGGTCTGGCAAGATCTGTGGATTTGGGGAAGGAAGTCGAAGATGGAGGACAGGGATTTCAACTGACGAGACATGTGGTGGGTACACGGGGCTACATGGCGCCGGAGTACATGGAAGACGGGGTGATTACTCCGAAACTGGATGTGTTTGCATTTGGGGTTGTGTTGTTGGAGCTATTGTCCGGAAGACCAGCCTCAGGTGACGACGAATACACGTTGCTCTATTCATCCATTAGTGGGGTGCTTGAAGGAGATCATGTGGGGGACAAAATTAAAGGGTTTATGGATCCTTCTCTGAGGCGCCAGTATCCTTTGGAGCTGGCGTTTTCAATGGCTCAGCTCGCTAAGAGCTGCGTTGCGCCTCAGATCAACTCACGACCCACCATGGCTCAAGCTTCTGGTACTCTGTCTAAGATTCTTTCGTCAACTCTCGACTGGGATTCATCTAAAGCTGTGGATCTTGAACATTCAAGGTCACTGAGTCATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009719 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

672

Amino Acids

72.8

Weight (kDa)

6.1

Isoelectric Point (pI)

47.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	54 - 110	5.3e-17	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	114 - 168	2.7e-25	LYK3/4/5 LysM2 domain
LysM2_NFP	PF23457	115 - 167	4.2e-08	NFP LysM2 domain
LysM3_LYK4_5	PF23473	183 - 232	4.7e-12	LYK4/5 LysM3 domain
Pkinase	PF00069	390 - 640	2.6e-35	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	393 - 640	1.4e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33580
fragaria_vesca	FvH4_5g26710 FvH4_5g26740
prunus_persica	Prupe.5G001000_v2.0.a1
pyrus_communis	pycom16g26340
rosa_chinensis	RchiOBHm_Chr7g0217591 RchiOBHm_Chr7g0217601
rosa_laevigata	RLG00000002457 RLG00000002458
rosa_multiflora	Rmu_co8386267.1_g000001 Rmu_sc0006161.1_g000002 Rmu_ssc0000225.1_g000002
rosa_roxburghii	Rroxscaffold_3G00241810 Rroxscaffold_3G00241840
rosa_rugosa	Rorug07G0170300 Rorug07G0170300
rosa_samantha	Rh7AG310400 Rh7BG301700 Rh7CG329400 Rh7DG309800 Rh7DG310500
rosa_wichuraiana	Rw7G026310 Rw7G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	302, 915
AatII	GACGTC	1 cut(s)	279
AbsI	CCTCGAGG	1 cut(s)	470
Acc36I	ACCTGC	2 cut(s)	558, 1104
AccB1I	GGYRCC	5 cut(s)	149, 493, 927, 1624, 1824
AccB7I	CCANNNNNTGG	1 cut(s)	806
AccBSI	CCGCTC	1 cut(s)	155
AccI	GTMKAC	2 cut(s)	279, 1311
AccIII	TCCGGA	1 cut(s)	1706
AclWI	GGATC	5 cut(s)	548, 1253, 1805, 1818, 1989
AcoI	YGGCCR	2 cut(s)	1028, 1413
AcuI	CTGAAG	3 cut(s)	389, 743, 1138
AcyI	GRCGYC	7 cut(s)	150, 276, 846, 913, 928, 1625, 1825
AdeI	CACNNNGTG	1 cut(s)	806
AfaI	GTAC	5 cut(s)	548, 618, 1609, 1634, 1927
AfiI	CCNNNNNNNGG	5 cut(s)	537, 806, 1047, 1721, 1761
AflIII	ACRYGT	2 cut(s)	1597, 1737
AgsI	TTSAA	7 cut(s)	719, 1357, 1586, 1772, 1854, 1988, 1995
AjiI	CACGTC	1 cut(s)	1411
AjnI	CCWGG	2 cut(s)	411, 1491
AjuI	GAANNNNNNNTTGG	2 cut(s)	796, 828
Alw21I	GWGCWC	1 cut(s)	959
Alw26I	GTCTC	4 cut(s)	49, 361, 866, 1588
AlwI	GGATC	5 cut(s)	548, 1253, 1805, 1818, 1989
Ama87I	CYCGRG	1 cut(s)	470
Aor13HI	TCCGGA	1 cut(s)	1706
AoxI	GGCC	6 cut(s)	334, 432, 478, 555, 1028, 1413
ApeKI	GCWGC	3 cut(s)	73, 1181, 1875
ArsI	GACNNNNNNTTYG	2 cut(s)	371, 403
AseI	ATTAAT	1 cut(s)	1457
AspLEI	GCGC	8 cut(s)	152, 167, 790, 930, 1423, 1627, 1827, 1885
AspS9I	GGNCC	2 cut(s)	335, 433
AsuC2I	CCSGG	1 cut(s)	538
AsuHPI	GGTGA	7 cut(s)	118, 774, 789, 974, 1204, 1660, 1736
AsuII	TTCGAA	1 cut(s)	1089
AvaI	CYCGRG	1 cut(s)	470
AxyI	CCTNAGG	1 cut(s)	1720
BaeI	ACNNNNGTAYC	2 cut(s)	710, 743
BalI	TGGCCA	1 cut(s)	1415
BamHI	GGATCC	1 cut(s)	1810
BanI	GGYRCC	5 cut(s)	149, 493, 927, 1624, 1824
BanII	GRGCYC	1 cut(s)	959
BbsI	GAAGAC	7 cut(s)	582, 804, 823, 1098, 1144, 1647, 1717
Bbv12I	GWGCWC	1 cut(s)	959
BbvI	GCAGC	3 cut(s)	85, 1168, 1862
BccI	CCATC	3 cut(s)	197, 293, 1562
BceAI	ACGGC	6 cut(s)	163, 593, 760, 900, 1169, 1186
BcgI	CGANNNNNNTGC	2 cut(s)	1163, 1197
BciT130I	CCWGG	2 cut(s)	413, 1493
BciVI	GTATCC	2 cut(s)	738, 1842
BcnI	CCSGG	1 cut(s)	538
BcoDI	GTCTC	4 cut(s)	49, 361, 866, 1588
BfaI	CTAG	2 cut(s)	53, 686
BfmI	CTRYAG	1 cut(s)	1097
BfoI	RGCGCY	5 cut(s)	153, 791, 931, 1628, 1828
BfuAI	ACCTGC	2 cut(s)	558, 1104
BfuI	GTATCC	2 cut(s)	738, 1842
BglII	AGATCT	1 cut(s)	1538
BlpI	GCTNAGC	1 cut(s)	1860
Bme1390I	CCNGG	3 cut(s)	413, 538, 1493
BmeT110I	CYCGRG	1 cut(s)	470
BmgBI	CACGTC	1 cut(s)	1411
BmgT120I	GGNCC	2 cut(s)	335, 433
BmiI	GGNNCC	9 cut(s)	151, 235, 337, 495, 929, 1144, 1626, 1812, 1826
BmrFI	CCNGG	3 cut(s)	413, 538, 1493
BmrI	ACTGGG	1 cut(s)	1969
BmsI	GCATC	5 cut(s)	3, 12, 451, 1168, 1486
BmuI	ACTGGG	1 cut(s)	1969
BpiI	GAAGAC	7 cut(s)	582, 804, 823, 1098, 1144, 1647, 1717
Bpu1102I	GCTNAGC	1 cut(s)	1860
Bpu14I	TTCGAA	1 cut(s)	1089
BpuEI	CTTGAG	2 cut(s)	1525, 1899
BpuMI	CCSGG	1 cut(s)	538
BsaHI	GRCGYC	7 cut(s)	150, 276, 846, 913, 928, 1625, 1825
BsaI	GGTCTC	1 cut(s)	49
BsaJI	CCNNGG	4 cut(s)	229, 412, 1512, 1908
BsaWI	WCCGGW	2 cut(s)	959, 1706
Bsc4I	CCNNNNNNNGG	5 cut(s)	537, 806, 1047, 1721, 1761
Bse118I	RCCGGY	3 cut(s)	131, 924, 1139
Bse1I	ACTGG	3 cut(s)	1668, 1828, 1964
Bse21I	CCTNAGG	1 cut(s)	1720
Bse3DI	GCAATG	1 cut(s)	1398
BseAI	TCCGGA	1 cut(s)	1706
BseBI	CCWGG	2 cut(s)	413, 1493
BseDI	CCNNGG	4 cut(s)	229, 412, 1512, 1908
BseGI	GGATG	4 cut(s)	285, 1501, 1672, 1751
BseLI	CCNNNNNNNGG	5 cut(s)	537, 806, 1047, 1721, 1761
BseMI	GCAATG	1 cut(s)	1398
BseMII	CTCAG	6 cut(s)	1287, 1734, 1811, 1874, 1901, 1994
BseNI	ACTGG	3 cut(s)	1668, 1828, 1964
BseXI	GCAGC	3 cut(s)	85, 1168, 1862
BseYI	CCCAGC	1 cut(s)	345
BshFI	GGCC	6 cut(s)	336, 434, 480, 557, 1030, 1415
BshNI	GGYRCC	5 cut(s)	149, 493, 927, 1624, 1824
BsiHKAI	GWGCWC	1 cut(s)	959
BsiHKCI	CYCGRG	1 cut(s)	470
BsiSI	CCGG	8 cut(s)	132, 333, 537, 925, 960, 1140, 1628, 1707
BslFI	GGGAC	4 cut(s)	296, 429, 1195, 1802
BslI	CCNNNNNNNGG	5 cut(s)	537, 806, 1047, 1721, 1761
BsmAI	GTCTC	4 cut(s)	49, 361, 866, 1588
BsmBI	CGTCTC	1 cut(s)	361
BsmFI	GGGAC	4 cut(s)	296, 429, 1195, 1802
BsnI	GGCC	6 cut(s)	336, 434, 480, 557, 1030, 1415
Bso31I	GGTCTC	1 cut(s)	49
BsoBI	CYCGRG	1 cut(s)	470
Bsp119I	TTCGAA	1 cut(s)	1089
Bsp1286I	GDGCHC	1 cut(s)	959
Bsp13I	TCCGGA	1 cut(s)	1706
Bsp1720I	GCTNAGC	1 cut(s)	1860
Bsp19I	CCATGG	1 cut(s)	1908
BspANI	GGCC	6 cut(s)	336, 434, 480, 557, 1030, 1415
BspCNI	CTCAG	6 cut(s)	1286, 1733, 1812, 1873, 1900, 1995
BspEI	TCCGGA	1 cut(s)	1706
BspLI	GGNNCC	9 cut(s)	151, 235, 337, 495, 929, 1144, 1626, 1812, 1826
BspMAI	CTGCAG	1 cut(s)	1101
BspMI	ACCTGC	2 cut(s)	558, 1104
BspPI	GGATC	5 cut(s)	548, 1253, 1805, 1818, 1989
BspT104I	TTCGAA	1 cut(s)	1089
BspT107I	GGYRCC	5 cut(s)	149, 493, 927, 1624, 1824
BspTNI	GGTCTC	1 cut(s)	49
BsrBI	CCGCTC	1 cut(s)	155
BsrDI	GCAATG	1 cut(s)	1398
BsrFI	RCCGGY	3 cut(s)	131, 924, 1139
BsrI	ACTGG	3 cut(s)	1668, 1828, 1964
BssAI	RCCGGY	3 cut(s)	131, 924, 1139
BssECI	CCNNGG	4 cut(s)	229, 412, 1512, 1908
BssNI	GRCGYC	7 cut(s)	150, 276, 846, 913, 928, 1625, 1825
BssT1I	CCWWGG	2 cut(s)	1512, 1908
Bst2UI	CCWGG	2 cut(s)	413, 1493
Bst6I	CTCTTC	3 cut(s)	54, 720, 899
BstACI	GRCGYC	7 cut(s)	150, 276, 846, 913, 928, 1625, 1825
BstAPI	GCANNNNNTGC	1 cut(s)	22
BstBI	TTCGAA	1 cut(s)	1089
BstC8I	GCNNGC	7 cut(s)	133, 511, 555, 856, 1141, 1845, 1866
BstDEI	CTNAG	8 cut(s)	1273, 1720, 1820, 1860, 1869, 1887, 1935, 2003
BstDSI	CCRYGG	1 cut(s)	1908
BstF5I	GGATG	4 cut(s)	285, 1501, 1672, 1751
BstH2I	RGCGCY	5 cut(s)	153, 791, 931, 1628, 1828
BstHHI	GCGC	8 cut(s)	152, 167, 790, 930, 1423, 1627, 1827, 1885
BstMAI	GTCTC	4 cut(s)	49, 361, 866, 1588
BstMWI	GCNNNNNNNGC	6 cut(s)	22, 73, 141, 979, 1517, 1865
BstNI	CCWGG	2 cut(s)	413, 1493
BstNSI	RCATGY	1 cut(s)	1601
BstSCI	CCNGG	3 cut(s)	411, 536, 1491
BstSFI	CTRYAG	1 cut(s)	1097
BstV1I	GCAGC	3 cut(s)	85, 1168, 1862
BstV2I	GAAGAC	7 cut(s)	582, 804, 823, 1098, 1144, 1647, 1717
BstX2I	RGATCY	3 cut(s)	1538, 1810, 1981
BstYI	RGATCY	3 cut(s)	1538, 1810, 1981
Bsu36I	CCTNAGG	1 cut(s)	1720
BsuI	GTATCC	2 cut(s)	738, 1842
BsuRI	GGCC	6 cut(s)	336, 434, 480, 557, 1030, 1415
BtgI	CCRYGG	1 cut(s)	1908
BtgZI	GCGATG	2 cut(s)	235, 379
BtrI	CACGTC	1 cut(s)	1411
BtsCI	GGATG	4 cut(s)	285, 1501, 1672, 1751
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	2 cut(s)	1068, 2000
BveI	ACCTGC	2 cut(s)	558, 1104
Cac8I	GCNNGC	7 cut(s)	133, 511, 555, 856, 1141, 1845, 1866
CfoI	GCGC	8 cut(s)	152, 167, 790, 930, 1423, 1627, 1827, 1885
Cfr10I	RCCGGY	3 cut(s)	131, 924, 1139
Cfr13I	GGNCC	2 cut(s)	335, 433
CseI	GACGC	3 cut(s)	835, 921, 1273
Csp6I	GTAC	5 cut(s)	547, 617, 1608, 1633, 1926
CspCI	CAANNNNNGTGG	2 cut(s)	1524, 1559
CviAII	CATG	9 cut(s)	68, 162, 1380, 1598, 1621, 1636, 1781, 1909, 2009
CviQI	GTAC	5 cut(s)	547, 617, 1608, 1633, 1926
DdeI	CTNAG	8 cut(s)	1273, 1720, 1820, 1860, 1869, 1887, 1935, 2003
DinI	GGCGCC	4 cut(s)	151, 929, 1626, 1826
DraIII	CACNNNGTG	1 cut(s)	806
DrdI	GACNNNNNNGTC	2 cut(s)	302, 915
DseDI	GACNNNNNNGTC	2 cut(s)	302, 915
EaeI	YGGCCR	2 cut(s)	1028, 1413
Eam1104I	CTCTTC	3 cut(s)	54, 720, 899
EarI	CTCTTC	3 cut(s)	54, 720, 899
EciI	GGCGGA	2 cut(s)	738, 1207
Ecl136II	GAGCTC	1 cut(s)	957
Eco130I	CCWWGG	2 cut(s)	1512, 1908
Eco24I	GRGCYC	1 cut(s)	959
Eco31I	GGTCTC	1 cut(s)	49
Eco53kI	GAGCTC	1 cut(s)	957
Eco57I	CTGAAG	3 cut(s)	389, 743, 1138
Eco81I	CCTNAGG	1 cut(s)	1720
Eco88I	CYCGRG	1 cut(s)	470
EcoICRI	GAGCTC	1 cut(s)	957
EcoO109I	RGGNCCY	1 cut(s)	433
EcoRII	CCWGG	2 cut(s)	411, 1491
EcoT14I	CCWWGG	2 cut(s)	1512, 1908
EcoT38I	GRGCYC	1 cut(s)	959
EgeI	GGCGCC	4 cut(s)	151, 929, 1626, 1826
EheI	GGCGCC	4 cut(s)	151, 929, 1626, 1826
ErhI	CCWWGG	2 cut(s)	1512, 1908
Esp3I	CGTCTC	1 cut(s)	361
FaeI	CATG	9 cut(s)	71, 165, 1383, 1601, 1624, 1639, 1784, 1912, 2012
FalI	AAGNNNNNCTT	4 cut(s)	796, 828, 815, 847
FaqI	GGGAC	4 cut(s)	296, 429, 1195, 1802
FatI	CATG	9 cut(s)	67, 161, 1379, 1597, 1620, 1635, 1780, 1908, 2008
FblI	GTMKAC	2 cut(s)	279, 1311
FokI	GGATG	4 cut(s)	272, 1508, 1679, 1738
FriOI	GRGCYC	1 cut(s)	959
FspBI	CTAG	2 cut(s)	53, 686
GlaI	GCGC	8 cut(s)	151, 166, 789, 929, 1422, 1626, 1826, 1884
GsaI	CCCAGC	1 cut(s)	349
HaeII	RGCGCY	5 cut(s)	153, 791, 931, 1628, 1828
HaeIII	GGCC	6 cut(s)	336, 434, 480, 557, 1030, 1415
HapII	CCGG	8 cut(s)	132, 333, 537, 925, 960, 1140, 1628, 1707
HgaI	GACGC	3 cut(s)	835, 921, 1273
HhaI	GCGC	8 cut(s)	152, 167, 790, 930, 1423, 1627, 1827, 1885
Hin1I	GRCGYC	7 cut(s)	150, 276, 846, 913, 928, 1625, 1825
Hin1II	CATG	9 cut(s)	71, 165, 1383, 1601, 1624, 1639, 1784, 1912, 2012
Hin6I	GCGC	8 cut(s)	150, 165, 788, 928, 1421, 1625, 1825, 1883
HinP1I	GCGC	8 cut(s)	150, 165, 788, 928, 1421, 1625, 1825, 1883
HincII	GTYRAC	2 cut(s)	280, 1950
HindII	GTYRAC	2 cut(s)	280, 1950
HindIII	AAGCTT	1 cut(s)	1917
HinfI	GANTC	8 cut(s)	116, 417, 1067, 1134, 1278, 1939, 1964, 2005
HpaII	CCGG	8 cut(s)	132, 333, 537, 925, 960, 1140, 1628, 1707
HphI	GGTGA	7 cut(s)	118, 774, 789, 974, 1204, 1660, 1736
Hpy166II	GTNNAC	6 cut(s)	280, 1288, 1312, 1396, 1610, 1950
Hpy188III	TCNNGA	7 cut(s)	421, 584, 1275, 1707, 1899, 1955, 1985
Hpy8I	GTNNAC	6 cut(s)	280, 1288, 1312, 1396, 1610, 1950
HpyAV	CCTTC	8 cut(s)	717, 762, 898, 1335, 1351, 1549, 1766, 1824
HpyCH4IV	ACGT	5 cut(s)	174, 276, 354, 1410, 1739
HpyCH4V	TGCA	7 cut(s)	16, 59, 67, 144, 1099, 1499, 1676
HpyF10VI	GCNNNNNNNGC	6 cut(s)	22, 73, 141, 979, 1517, 1865
HpyF3I	CTNAG	8 cut(s)	1273, 1720, 1820, 1860, 1869, 1887, 1935, 2003
HpySE526I	ACGT	5 cut(s)	174, 276, 354, 1410, 1739
Hsp92I	GRCGYC	7 cut(s)	150, 276, 846, 913, 928, 1625, 1825
Hsp92II	CATG	9 cut(s)	71, 165, 1383, 1601, 1624, 1639, 1784, 1912, 2012
HspAI	GCGC	8 cut(s)	150, 165, 788, 928, 1421, 1625, 1825, 1883
KasI	GGCGCC	4 cut(s)	149, 927, 1624, 1824
Kpn2I	TCCGGA	1 cut(s)	1706
KroI	GCCGGC	2 cut(s)	131, 1139
KroNI	GCCGGC	2 cut(s)	133, 1141
Lsp1109I	GCAGC	3 cut(s)	85, 1168, 1862
LweI	GCATC	5 cut(s)	3, 12, 451, 1168, 1486
MaeI	CTAG	2 cut(s)	53, 686
MaeII	ACGT	5 cut(s)	174, 276, 354, 1410, 1739
MaeIII	GTNAC	3 cut(s)	175, 1724, 1998
MbiI	CCGCTC	1 cut(s)	155
MflI	RGATCY	3 cut(s)	1538, 1810, 1981
MhlI	GDGCHC	1 cut(s)	959
MlsI	TGGCCA	1 cut(s)	1415
MluCI	AATT	4 cut(s)	947, 1112, 1522, 1794
MluNI	TGGCCA	1 cut(s)	1415
Mly113I	GGCGCC	4 cut(s)	150, 928, 1625, 1825
MlyI	GAGTC	4 cut(s)	110, 411, 1076, 2014
MmeI	TCCRAC	9 cut(s)	144, 270, 297, 678, 829, 840, 1032, 1281, 1674
Mox20I	TGGCCA	1 cut(s)	1415
MroI	TCCGGA	1 cut(s)	1706
MroNI	GCCGGC	2 cut(s)	131, 1139
MscI	TGGCCA	1 cut(s)	1415
MseI	TTAA	6 cut(s)	29, 645, 950, 1053, 1457, 1797
MslI	CAYNNNNRTG	1 cut(s)	491
Msp20I	TGGCCA	1 cut(s)	1415
MspI	CCGG	8 cut(s)	132, 333, 537, 925, 960, 1140, 1628, 1707
MspR9I	CCNGG	3 cut(s)	413, 538, 1493
MvaI	CCWGG	2 cut(s)	413, 1493
MwoI	GCNNNNNNNGC	6 cut(s)	22, 73, 141, 979, 1517, 1865
NaeI	GCCGGC	2 cut(s)	133, 1141
NarI	GGCGCC	4 cut(s)	150, 928, 1625, 1825
NciI	CCSGG	1 cut(s)	538
NcoI	CCATGG	1 cut(s)	1908
NgoMIV	GCCGGC	2 cut(s)	131, 1139
NlaIII	CATG	9 cut(s)	71, 165, 1383, 1601, 1624, 1639, 1784, 1912, 2012
NlaIV	GGNNCC	9 cut(s)	151, 235, 337, 495, 929, 1144, 1626, 1812, 1826
NmeAIII	GCCGAG	1 cut(s)	210
NmuCI	GTSAC	3 cut(s)	175, 1724, 1998
NspI	RCATGY	1 cut(s)	1601
NspV	TTCGAA	1 cut(s)	1089
PaeR7I	CTCGAG	1 cut(s)	470
PciI	ACATGT	1 cut(s)	1597
PcsI	WCGNNNNNNNCGW	2 cut(s)	843, 913
PdiI	GCCGGC	2 cut(s)	133, 1141
PfeI	GAWTC	4 cut(s)	1134, 1278, 1939, 1964
PflFI	GACNNNGTC	1 cut(s)	915
PflMI	CCANNNNNTGG	1 cut(s)	806
PfoI	TCCNGGA	1 cut(s)	1491
PleI	GAGTC	4 cut(s)	110, 411, 1075, 2013
PluTI	GGCGCC	4 cut(s)	153, 931, 1628, 1828
PpsI	GAGTC	4 cut(s)	110, 411, 1075, 2013
PscI	ACATGT	1 cut(s)	1597
PshBI	ATTAAT	1 cut(s)	1457
Psp124BI	GAGCTC	1 cut(s)	959
Psp6I	CCWGG	2 cut(s)	411, 1491
PspFI	CCCAGC	1 cut(s)	345
PspGI	CCWGG	2 cut(s)	411, 1491
PspN4I	GGNNCC	9 cut(s)	151, 235, 337, 495, 929, 1144, 1626, 1812, 1826
PspPI	GGNCC	2 cut(s)	335, 433
PspXI	VCTCGAGB	1 cut(s)	470
PstI	CTGCAG	1 cut(s)	1101
PsuI	RGATCY	3 cut(s)	1538, 1810, 1981
PsyI	GACNNNGTC	1 cut(s)	915
RsaI	GTAC	5 cut(s)	548, 618, 1609, 1634, 1927
RsaNI	GTAC	5 cut(s)	547, 617, 1608, 1633, 1926
RseI	CAYNNNNRTG	1 cut(s)	491
SacI	GAGCTC	1 cut(s)	959
SalI	GTCGAC	1 cut(s)	278
SaqAI	TTAA	6 cut(s)	29, 645, 950, 1053, 1457, 1797
Sau96I	GGNCC	2 cut(s)	335, 433
SchI	GAGTC	4 cut(s)	110, 411, 1076, 2014
ScrFI	CCNGG	3 cut(s)	413, 538, 1493
SduI	GDGCHC	1 cut(s)	959
SfaNI	GCATC	5 cut(s)	3, 12, 451, 1168, 1486
SfcI	CTRYAG	1 cut(s)	1097
SfoI	GGCGCC	4 cut(s)	151, 929, 1626, 1826
Sfr274I	CTCGAG	1 cut(s)	470
SfuI	TTCGAA	1 cut(s)	1089
SgrAI	CRCCGGYG	1 cut(s)	924
SlaI	CTCGAG	1 cut(s)	470
SmiMI	CAYNNNNRTG	1 cut(s)	491
SmlI	CTYRAG	3 cut(s)	470, 1504, 1914
SmoI	CTYRAG	3 cut(s)	470, 1504, 1914
Sse9I	AATT	4 cut(s)	947, 1112, 1522, 1794
SspDI	GGCGCC	4 cut(s)	149, 927, 1624, 1824
SspMI	CTAG	2 cut(s)	53, 686
SstI	GAGCTC	1 cut(s)	959
StyD4I	CCNGG	3 cut(s)	411, 536, 1491
StyI	CCWWGG	2 cut(s)	1512, 1908
TaiI	ACGT	5 cut(s)	177, 279, 357, 1413, 1742
TaqII	GACCGA	1 cut(s)	1517
TasI	AATT	4 cut(s)	947, 1112, 1522, 1794
TatI	WGTACW	1 cut(s)	1632
TauI	GCSGC	7 cut(s)	155, 257, 260, 480, 536, 775, 1033
TfiI	GAWTC	4 cut(s)	1134, 1278, 1939, 1964
Tru1I	TTAA	6 cut(s)	29, 645, 950, 1053, 1457, 1797
Tru9I	TTAA	6 cut(s)	29, 645, 950, 1053, 1457, 1797
TscAI	CASTG	2 cut(s)	1068, 2007
TseFI	GTSAC	3 cut(s)	175, 1724, 1998
TseI	GCWGC	3 cut(s)	73, 1181, 1875
Tsp45I	GTSAC	3 cut(s)	175, 1724, 1998
TspDTI	ATGAA	5 cut(s)	17, 23, 823, 1740, 1956
TspGWI	ACGGA	1 cut(s)	292
TspRI	CASTG	2 cut(s)	1068, 2007
Tth111I	GACNNNGTC	1 cut(s)	915
Van91I	CCANNNNNTGG	1 cut(s)	806
VspI	ATTAAT	1 cut(s)	1457
XceI	RCATGY	1 cut(s)	1601
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1528
XhoI	CTCGAG	1 cut(s)	470
XmiI	GTMKAC	2 cut(s)	279, 1311
XspI	CTAG	2 cut(s)	53, 686
ZraI	GACGTC	1 cut(s)	277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.