Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0008355

Physical Location & Seq

Genomic Coordinates Reverse (-)

36310789 .. 36313541

Gene Structure 2753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG310500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGAAGATGAAGTTGCTAACGTTAATGGTGGTCTCTGTTCTACTAGTTGCAGCTGTGCATGGGCAGCAGACCTACCTAGCCAACAAGCAGCTCGACTGCTACAACAACTACAACTCCACCGACGGCTACGTCTGCAACGGCCCCTCCCCCTCTTGCAACTCCTACCTCACTTTCCGCTCCATCAACCCTCTCTACAACTCCCCAACCTCTATCGCCTACCTCCTCGGCTCCACCGCCTCCGAAATCGCCTCCGCCAACAACATCTCCGACGTCGCCCCCATCGCCGCCGACACCCTCGTCCTCGTCCCCGTCAACTGCTCCTGCTCCGGCAACTACTCCCAGCACAACGCCTCCTACATCCTCAAGACCGCCTCCGACACCTACTTCGGCGTCGCCAACAACACCTACCAGGGCCTCACCACCTGTCAGTCCCTCATGCACCAGAACCCCTACGGCGACCGAAACCTCACTGTCGGCCTCCGCTTGGAAGTCCCCGTCAGATGCGCCTGCCCCACCGCCGCCCAGGCCGCCGCTGGCATCAACTACCTGCTCGTCTACCTAATCACGTGGGGCGACTCAACTGAAGCAATCGCTCAACGCTTCGGCGTAGATGAGTCCACCTTGCTCGCAGCCAACGACCTGTCGTCCACCGACATCATCTATCCCTTCACGCCCTTACTGGTTCCTCTCAAAACCAAACCTTCCCCTCTTCAACTCCCAACCTCACCTCCTCCGTCTCCGTCTCCGCCGCCTCCTCCCCCGCCGAGTGGCGGCTCTTCCAACAACAAGTGGGTCTTCATCGGCGTCGGCATCGGAGCTGGTTGTCTCCTCCTCCTCACCGCCCTCGCCGCCTTCCTCTTCTTATCCAAACGACGCCGCCGTCAGCTCCGCCAATCTCCCAAACCCAACTTGCGTCCAAAGAGCTCCGGTGACTACACGCCGAACTCTCTGCTACCCACCATCGCCTCCGACGACACAACGAAATCGTGGTCTTCCAGCGGGCTTAAAATTGCGGTGGAGTCCTTGACGCCTTACAAATTCCAAGACCTGCAGAGGGCCACCCAATTCTTCAGCGAGTCCAACAGAATCAACGGCTCCTCCGTTTTCAGAGCAACCTTCGACGGCGACGAAGCCGCCGTCAAGGTGATGACAGGCGACGTGGCACTCTCCGGCGACGAGATCAACATTCTGAAGCGGATCAATCACTCCAACATTATCAGACTCTCTGGATTCTGTGTCCACCCAGGAAACACTTACCTCGTTTACGAGTTCGCTCCTTCTGGCTCACTCATTGATTGTCTTCATAAGGGCGCCATTAGTCCTCTGTCATGGAAGCAGAGAGTTCAGATTGCTAGTGACGTGGCCAGTGCGCTCAACTATATACACAATTTCACAGAGCCTCCATTAATCCACAAGAACCTCAACAGCAGCAACATTCTCCTGGATGCAAACTTGAGAGCCAAGGTTGCCAATTTTGGTCTGGCAAGAGCTGTCGAGTTGGATAACGAAGACGAAGATGGAGAACAGGGATTTCAACAGACGAGGCACGTGGTGGGTACGAGGGGCTACATGGCGCCGGAGTACATTGAAAACGGAGTGATCACTCCGAAGCTCGATGTGTTTGCATTTGGGGTTGTTTTGTTGGAGCTCTTGTCTGGAAGAAGAGCCTCTGGTGATGAAGAGCACACATTACTGTATGAGTCCATTAGTGGGGTGCTTGAAGGAGATGATGTGAGGGACAAAATTAAAGAGTTTATGGATCCTTCTCTGAAAAGCAAGTGCCCTTTGGACCTGGCGTTTTCGATGGCTCAGCTCGCTAAGAGCTGTGTTGCGCCCCAGATCAACAATCGACCCACAATGGCTCAAGCTTCGGGGACTCTATCGAAGATTCTTTCGTCGACTCTAGACTGGGATCCATCTGATGCTGAGGATCTTAGAGATTCAAGGTCACTCAGTTATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009719 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

655

Amino Acids

70.95

Weight (kDa)

6.1

Isoelectric Point (pI)

50.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	51 - 108	1.5e-19	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	112 - 167	1.8e-26	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	182 - 230	5.5e-22	LYK4/5 LysM3 domain
LysM	PF01476	191 - 229	4.1e-08	LysM domain
Pkinase	PF00069	367 - 623	2.7e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	391 - 623	4.6e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33580
fragaria_vesca	FvH4_5g26710 FvH4_5g26740
prunus_persica	Prupe.5G001000_v2.0.a1
pyrus_communis	pycom16g26340
rosa_chinensis	RchiOBHm_Chr7g0217591 RchiOBHm_Chr7g0217601
rosa_laevigata	RLG00000002457 RLG00000002458
rosa_multiflora	Rmu_co8386267.1_g000001 Rmu_sc0006161.1_g000002 Rmu_ssc0000225.1_g000002
rosa_roxburghii	Rroxscaffold_3G00241810 Rroxscaffold_3G00241840
rosa_rugosa	Rorug07G0170300 Rorug07G0170300
rosa_samantha	Rh7AG310400 Rh7BG301700 Rh7CG329400 Rh7DG309800 Rh7DG310500
rosa_wichuraiana	Rw7G026310 Rw7G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	128, 296, 879
AatII	GACGTC	1 cut(s)	273
Acc36I	ACCTGC	2 cut(s)	555, 1056
AccB1I	GGYRCC	2 cut(s)	1310, 1573
AccBSI	CCGCTC	1 cut(s)	177
AccI	GTMKAC	2 cut(s)	555, 1898
AclI	AACGTT	1 cut(s)	20
AclWI	GGATC	6 cut(s)	1205, 1754, 1767, 1907, 1920, 1938
AcoI	YGGCCR	1 cut(s)	1362
AcsI	RAATTY	1 cut(s)	1037
AcuI	CTGAAG	3 cut(s)	603, 1054, 1211
AcvI	CACGTG	2 cut(s)	567, 1549
AcyI	GRCGYC	7 cut(s)	270, 390, 804, 874, 1028, 1311, 1574
AdeI	CACNNNGTG	1 cut(s)	1552
AfaI	GTAC	2 cut(s)	1558, 1583
AfiI	CCNNNNNNNGG	5 cut(s)	484, 767, 770, 1054, 1710
AgsI	TTSAA	5 cut(s)	713, 1535, 1589, 1721, 1944
AhdI	GACNNNNNGTC	1 cut(s)	643
AhlI	ACTAGT	1 cut(s)	43
AjiI	CACGTC	2 cut(s)	1159, 1360
AjnI	CCWGG	5 cut(s)	408, 522, 1243, 1440, 1791
Alw21I	GWGCWC	3 cut(s)	926, 1650, 1686
Alw26I	GTCTC	4 cut(s)	37, 741, 747, 830
AlwI	GGATC	6 cut(s)	1205, 1754, 1767, 1907, 1920, 1938
AoxI	GGCC	6 cut(s)	139, 412, 475, 525, 1056, 1362
ApeKI	GCWGC	5 cut(s)	50, 64, 88, 629, 1428
ApoI	RAATTY	1 cut(s)	1037
ArsI	GACNNNNNNTTYG	6 cut(s)	368, 400, 974, 1006, 1122, 1154
AseI	ATTAAT	1 cut(s)	1406
AspLEI	GCGC	5 cut(s)	506, 1313, 1372, 1576, 1834
AspS9I	GGNCC	4 cut(s)	140, 412, 1056, 1789
AsuHPI	GGTGA	6 cut(s)	409, 717, 829, 941, 1156, 1685
AvaII	GGWCC	1 cut(s)	1789
BaeGI	GKGCMC	1 cut(s)	1784
BalI	TGGCCA	1 cut(s)	1364
BamHI	GGATCC	2 cut(s)	1759, 1912
BanI	GGYRCC	2 cut(s)	1310, 1573
BanII	GRGCYC	2 cut(s)	926, 1650
BbrPI	CACGTG	2 cut(s)	567, 1549
BbsI	GAAGAC	4 cut(s)	787, 984, 1292, 1515
Bbv12I	GWGCWC	3 cut(s)	926, 1650, 1686
BbvCI	CCTCAGC	1 cut(s)	1926
BbvI	GCAGC	5 cut(s)	62, 76, 100, 641, 1440
BccI	CCATC	6 cut(s)	188, 287, 968, 1511, 1798, 1924
BceAI	ACGGC	7 cut(s)	139, 154, 469, 864, 1108, 1121, 1138
BcgI	CGANNNNNNTGC	4 cut(s)	931, 965, 1604, 1638
BciT130I	CCWGG	5 cut(s)	410, 524, 1245, 1442, 1793
BclI	TGATCA	1 cut(s)	1599
BcoDI	GTCTC	4 cut(s)	37, 741, 747, 830
BcuI	ACTAGT	1 cut(s)	43
BfaI	CTAG	4 cut(s)	44, 77, 1353, 1904
BfmI	CTRYAG	1 cut(s)	1049
BfoI	RGCGCY	2 cut(s)	1314, 1577
BfuAI	ACCTGC	2 cut(s)	555, 1056
BglI	GCCNNNNNGGC	1 cut(s)	524
BlpI	GCTNAGC	1 cut(s)	1809
Bme1390I	CCNGG	5 cut(s)	410, 524, 1245, 1442, 1793
Bme18I	GGWCC	1 cut(s)	1789
BmeRI	GACNNNNNGTC	1 cut(s)	643
BmgBI	CACGTC	2 cut(s)	1159, 1360
BmgT120I	GGNCC	4 cut(s)	140, 412, 1056, 1789
BmiI	GGNNCC	8 cut(s)	142, 229, 684, 1096, 1312, 1575, 1761, 1914
BmrFI	CCNGG	5 cut(s)	410, 524, 1245, 1442, 1793
BmrI	ACTGGG	1 cut(s)	1918
BmsI	GCATC	5 cut(s)	491, 546, 819, 1435, 1912
BmuI	ACTGGG	1 cut(s)	1918
BpiI	GAAGAC	4 cut(s)	787, 984, 1292, 1515
Bpu10I	CCTNAGC	1 cut(s)	1926
Bpu1102I	GCTNAGC	1 cut(s)	1809
BpuEI	CTTGAG	3 cut(s)	347, 1474, 1848
BsaAI	YACGTR	2 cut(s)	567, 1549
BsaHI	GRCGYC	7 cut(s)	270, 390, 804, 874, 1028, 1311, 1574
BsaI	GGTCTC	1 cut(s)	37
BsaJI	CCNNGG	5 cut(s)	223, 409, 522, 1243, 1461
BsaWI	WCCGGW	1 cut(s)	926
Bsc4I	CCNNNNNNNGG	5 cut(s)	484, 767, 770, 1054, 1710
Bse1I	ACTGG	3 cut(s)	684, 1365, 1913
BseBI	CCWGG	5 cut(s)	410, 524, 1245, 1442, 1793
BseDI	CCNNGG	5 cut(s)	223, 409, 522, 1243, 1461
BseGI	GGATG	2 cut(s)	357, 1450
BseLI	CCNNNNNNNGG	5 cut(s)	484, 767, 770, 1054, 1710
BseMII	CTCAG	3 cut(s)	1823, 1917, 1966
BseNI	ACTGG	3 cut(s)	684, 1365, 1913
BseRI	GAGGAG	7 cut(s)	212, 720, 744, 818, 821, 824, 1087
BseSI	GKGCMC	1 cut(s)	1784
BseXI	GCAGC	5 cut(s)	62, 76, 100, 641, 1440
BseYI	CCCAGC	1 cut(s)	339
Bsh1285I	CGRYCG	1 cut(s)	460
BshFI	GGCC	6 cut(s)	141, 414, 477, 527, 1058, 1364
BshNI	GGYRCC	2 cut(s)	1310, 1573
BsiEI	CGRYCG	1 cut(s)	460
BsiHKAI	GWGCWC	3 cut(s)	926, 1650, 1686
BsiSI	CCGG	4 cut(s)	327, 927, 1170, 1577
BslFI	GGGAC	5 cut(s)	290, 415, 476, 1751, 1888
BslI	CCNNNNNNNGG	5 cut(s)	484, 767, 770, 1054, 1710
BsmAI	GTCTC	4 cut(s)	37, 741, 747, 830
BsmBI	CGTCTC	2 cut(s)	741, 747
BsmFI	GGGAC	5 cut(s)	290, 415, 476, 1751, 1888
BsnI	GGCC	6 cut(s)	141, 414, 477, 527, 1058, 1364
Bso31I	GGTCTC	1 cut(s)	37
Bsp1286I	GDGCHC	4 cut(s)	926, 1650, 1686, 1784
Bsp143I	GATC	7 cut(s)	1179, 1197, 1599, 1759, 1839, 1912, 1930
Bsp1720I	GCTNAGC	1 cut(s)	1809
BspANI	GGCC	6 cut(s)	141, 414, 477, 527, 1058, 1364
BspCNI	CTCAG	3 cut(s)	1822, 1918, 1965
BspLI	GGNNCC	8 cut(s)	142, 229, 684, 1096, 1312, 1575, 1761, 1914
BspMAI	CTGCAG	1 cut(s)	1053
BspMI	ACCTGC	2 cut(s)	555, 1056
BspPI	GGATC	6 cut(s)	1205, 1754, 1767, 1907, 1920, 1938
BspQI	GCTCTTC	3 cut(s)	781, 1657, 1674
BspT107I	GGYRCC	2 cut(s)	1310, 1573
BspTNI	GGTCTC	1 cut(s)	37
BsrBI	CCGCTC	1 cut(s)	177
BsrI	ACTGG	3 cut(s)	684, 1365, 1913
BssECI	CCNNGG	5 cut(s)	223, 409, 522, 1243, 1461
BssMI	GATC	7 cut(s)	1179, 1197, 1599, 1759, 1839, 1912, 1930
BssNI	GRCGYC	7 cut(s)	270, 390, 804, 874, 1028, 1311, 1574
BssT1I	CCWWGG	1 cut(s)	1461
Bst2UI	CCWGG	5 cut(s)	410, 524, 1245, 1442, 1793
Bst4CI	ACNGT	2 cut(s)	472, 1695
Bst6I	CTCTTC	5 cut(s)	714, 781, 863, 1657, 1674
BstACI	GRCGYC	7 cut(s)	270, 390, 804, 874, 1028, 1311, 1574
BstBAI	YACGTR	2 cut(s)	567, 1549
BstC8I	GCNNGC	5 cut(s)	508, 535, 627, 1001, 1815
BstDEI	CTNAG	5 cut(s)	1809, 1818, 1926, 1934, 1952
BstF5I	GGATG	2 cut(s)	357, 1450
BstH2I	RGCGCY	2 cut(s)	1314, 1577
BstHHI	GCGC	5 cut(s)	506, 1313, 1372, 1576, 1834
BstKTI	GATC	7 cut(s)	1182, 1200, 1602, 1762, 1842, 1915, 1933
BstMAI	GTCTC	4 cut(s)	37, 741, 747, 830
BstMBI	GATC	7 cut(s)	1179, 1197, 1599, 1759, 1839, 1912, 1930
BstMCI	CGRYCG	1 cut(s)	460
BstMWI	GCNNNNNNNGC	8 cut(s)	64, 132, 281, 524, 527, 848, 1466, 1814
BstNI	CCWGG	5 cut(s)	410, 524, 1245, 1442, 1793
BstSCI	CCNGG	5 cut(s)	408, 522, 1243, 1440, 1791
BstSFI	CTRYAG	1 cut(s)	1049
BstSLI	GKGCMC	1 cut(s)	1784
BstV1I	GCAGC	5 cut(s)	62, 76, 100, 641, 1440
BstV2I	GAAGAC	4 cut(s)	787, 984, 1292, 1515
BstX2I	RGATCY	3 cut(s)	1759, 1912, 1930
BstYI	RGATCY	3 cut(s)	1759, 1912, 1930
BsuRI	GGCC	6 cut(s)	141, 414, 477, 527, 1058, 1364
BtgZI	GCGATG	2 cut(s)	265, 946
BtrI	CACGTC	2 cut(s)	1159, 1360
BtsCI	GGATG	2 cut(s)	357, 1450
BtsIMutI	CAGTG	2 cut(s)	468, 1372
BveI	ACCTGC	2 cut(s)	555, 1056
Cac8I	GCNNGC	5 cut(s)	508, 535, 627, 1001, 1815
CfoI	GCGC	5 cut(s)	506, 1313, 1372, 1576, 1834
Cfr13I	GGNCC	4 cut(s)	140, 412, 1056, 1789
CseI	GACGC	5 cut(s)	379, 793, 882, 902, 1036
Csp6I	GTAC	2 cut(s)	1557, 1582
CviAII	CATG	4 cut(s)	59, 436, 1329, 1570
CviQI	GTAC	2 cut(s)	1557, 1582
DdeI	CTNAG	5 cut(s)	1809, 1818, 1926, 1934, 1952
DinI	GGCGCC	2 cut(s)	1312, 1575
DpnI	GATC	7 cut(s)	1181, 1199, 1601, 1761, 1841, 1914, 1932
DpnII	GATC	7 cut(s)	1179, 1197, 1599, 1759, 1839, 1912, 1930
DraIII	CACNNNGTG	1 cut(s)	1552
DrdI	GACNNNNNNGTC	3 cut(s)	128, 296, 879
DriI	GACNNNNNGTC	1 cut(s)	643
DseDI	GACNNNNNNGTC	3 cut(s)	128, 296, 879
EaeI	YGGCCR	1 cut(s)	1362
Eam1104I	CTCTTC	5 cut(s)	714, 781, 863, 1657, 1674
Eam1105I	GACNNNNNGTC	1 cut(s)	643
EarI	CTCTTC	5 cut(s)	714, 781, 863, 1657, 1674
EciI	GGCGGA	3 cut(s)	241, 735, 878
Ecl136II	GAGCTC	2 cut(s)	924, 1648
Eco130I	CCWWGG	1 cut(s)	1461
Eco24I	GRGCYC	2 cut(s)	926, 1650
Eco31I	GGTCTC	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	1789
Eco53kI	GAGCTC	2 cut(s)	924, 1648
Eco57I	CTGAAG	3 cut(s)	603, 1054, 1211
Eco72I	CACGTG	2 cut(s)	567, 1549
EcoICRI	GAGCTC	2 cut(s)	924, 1648
EcoO109I	RGGNCCY	1 cut(s)	412
EcoRII	CCWGG	5 cut(s)	408, 522, 1243, 1440, 1791
EcoT14I	CCWWGG	1 cut(s)	1461
EcoT38I	GRGCYC	2 cut(s)	926, 1650
EgeI	GGCGCC	2 cut(s)	1312, 1575
EheI	GGCGCC	2 cut(s)	1312, 1575
ErhI	CCWWGG	1 cut(s)	1461
Esp3I	CGTCTC	2 cut(s)	741, 747
FaeI	CATG	4 cut(s)	62, 439, 1332, 1573
FalI	AAGNNNNNCTT	2 cut(s)	779, 811
FaqI	GGGAC	5 cut(s)	290, 415, 476, 1751, 1888
FatI	CATG	4 cut(s)	58, 435, 1328, 1569
FauI	CCCGC	2 cut(s)	768, 992
FbaI	TGATCA	1 cut(s)	1599
FblI	GTMKAC	2 cut(s)	555, 1898
FokI	GGATG	2 cut(s)	344, 1457
FriOI	GRGCYC	2 cut(s)	926, 1650
FspBI	CTAG	4 cut(s)	44, 77, 1353, 1904
GlaI	GCGC	5 cut(s)	505, 1312, 1371, 1575, 1833
GsaI	CCCAGC	1 cut(s)	343
HaeII	RGCGCY	2 cut(s)	1314, 1577
HaeIII	GGCC	6 cut(s)	141, 414, 477, 527, 1058, 1364
HapII	CCGG	4 cut(s)	327, 927, 1170, 1577
HgaI	GACGC	5 cut(s)	379, 793, 882, 902, 1036
HhaI	GCGC	5 cut(s)	506, 1313, 1372, 1576, 1834
Hin1I	GRCGYC	7 cut(s)	270, 390, 804, 874, 1028, 1311, 1574
Hin1II	CATG	4 cut(s)	62, 439, 1332, 1573
Hin6I	GCGC	5 cut(s)	504, 1311, 1370, 1574, 1832
HinP1I	GCGC	5 cut(s)	504, 1311, 1370, 1574, 1832
HincII	GTYRAC	2 cut(s)	313, 1899
HindII	GTYRAC	2 cut(s)	313, 1899
HindIII	AAGCTT	1 cut(s)	1866
HpaII	CCGG	4 cut(s)	327, 927, 1170, 1577
HphI	GGTGA	6 cut(s)	409, 717, 829, 941, 1156, 1685
Hpy166II	GTNNAC	7 cut(s)	313, 556, 618, 648, 1240, 1264, 1899
Hpy188III	TCNNGA	4 cut(s)	364, 1227, 1656, 1904
Hpy8I	GTNNAC	7 cut(s)	313, 556, 618, 648, 1240, 1264, 1899
HpyAV	CCTTC	7 cut(s)	676, 711, 862, 1126, 1287, 1715, 1773
HpyCH4III	ACNGT	2 cut(s)	472, 1695
HpyCH4IV	ACGT	7 cut(s)	20, 129, 270, 566, 1158, 1359, 1548
HpyCH4V	TGCA	8 cut(s)	50, 58, 135, 156, 439, 1051, 1448, 1625
HpyF10VI	GCNNNNNNNGC	8 cut(s)	64, 132, 281, 524, 527, 848, 1466, 1814
HpyF3I	CTNAG	5 cut(s)	1809, 1818, 1926, 1934, 1952
HpySE526I	ACGT	7 cut(s)	20, 129, 270, 566, 1158, 1359, 1548
Hsp92I	GRCGYC	7 cut(s)	270, 390, 804, 874, 1028, 1311, 1574
Hsp92II	CATG	4 cut(s)	62, 439, 1332, 1573
HspAI	GCGC	5 cut(s)	504, 1311, 1370, 1574, 1832
KasI	GGCGCC	2 cut(s)	1310, 1573
Ksp22I	TGATCA	1 cut(s)	1599
Kzo9I	GATC	7 cut(s)	1179, 1197, 1599, 1759, 1839, 1912, 1930
LguI	GCTCTTC	3 cut(s)	781, 1657, 1674
Lsp1109I	GCAGC	5 cut(s)	62, 76, 100, 641, 1440
LweI	GCATC	5 cut(s)	491, 546, 819, 1435, 1912
MaeI	CTAG	4 cut(s)	44, 77, 1353, 1904
MaeII	ACGT	7 cut(s)	20, 129, 270, 566, 1158, 1359, 1548
MaeIII	GTNAC	3 cut(s)	929, 1355, 1947
MalI	GATC	7 cut(s)	1181, 1199, 1601, 1761, 1841, 1914, 1932
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	7 cut(s)	1179, 1197, 1599, 1759, 1839, 1912, 1930
MflI	RGATCY	3 cut(s)	1759, 1912, 1930
MhlI	GDGCHC	4 cut(s)	926, 1650, 1686, 1784
MlsI	TGGCCA	1 cut(s)	1364
MluCI	AATT	6 cut(s)	1008, 1037, 1064, 1387, 1471, 1743
MluNI	TGGCCA	1 cut(s)	1364
Mly113I	GGCGCC	2 cut(s)	1311, 1574
MlyI	GAGTC	8 cut(s)	569, 623, 1028, 1085, 1215, 1709, 1870, 1894
MmeI	TCCRAC	8 cut(s)	291, 399, 804, 993, 1104, 1233, 1479, 1623
Mox20I	TGGCCA	1 cut(s)	1364
MscI	TGGCCA	1 cut(s)	1364
MseI	TTAA	4 cut(s)	23, 1005, 1406, 1746
Msp20I	TGGCCA	1 cut(s)	1364
MspA1I	CMGCKG	3 cut(s)	53, 533, 999
MspI	CCGG	4 cut(s)	327, 927, 1170, 1577
MspR9I	CCNGG	5 cut(s)	410, 524, 1245, 1442, 1793
MvaI	CCWGG	5 cut(s)	410, 524, 1245, 1442, 1793
MwoI	GCNNNNNNNGC	8 cut(s)	64, 132, 281, 524, 527, 848, 1466, 1814
NarI	GGCGCC	2 cut(s)	1311, 1574
NdeII	GATC	7 cut(s)	1179, 1197, 1599, 1759, 1839, 1912, 1930
NlaIII	CATG	4 cut(s)	62, 439, 1332, 1573
NlaIV	GGNNCC	8 cut(s)	142, 229, 684, 1096, 1312, 1575, 1761, 1914
NmeAIII	GCCGAG	2 cut(s)	204, 789
NmuCI	GTSAC	3 cut(s)	929, 1355, 1947
PciSI	GCTCTTC	3 cut(s)	781, 1657, 1674
PcsI	WCGNNNNNNNCGW	6 cut(s)	633, 877, 969, 1098, 1125, 1134
PfeI	GAWTC	4 cut(s)	1086, 1230, 1888, 1940
PfoI	TCCNGGA	1 cut(s)	1440
PleI	GAGTC	8 cut(s)	569, 622, 1027, 1084, 1215, 1708, 1870, 1894
PluTI	GGCGCC	2 cut(s)	1314, 1577
PmaCI	CACGTG	2 cut(s)	567, 1549
PmlI	CACGTG	2 cut(s)	567, 1549
PpsI	GAGTC	8 cut(s)	569, 622, 1027, 1084, 1215, 1708, 1870, 1894
Ppu21I	YACGTR	2 cut(s)	567, 1549
PshBI	ATTAAT	1 cut(s)	1406
Psp124BI	GAGCTC	2 cut(s)	926, 1650
Psp1406I	AACGTT	1 cut(s)	20
Psp6I	CCWGG	5 cut(s)	408, 522, 1243, 1440, 1791
PspCI	CACGTG	2 cut(s)	567, 1549
PspFI	CCCAGC	1 cut(s)	339
PspGI	CCWGG	5 cut(s)	408, 522, 1243, 1440, 1791
PspN4I	GGNNCC	8 cut(s)	142, 229, 684, 1096, 1312, 1575, 1761, 1914
PspPI	GGNCC	4 cut(s)	140, 412, 1056, 1789
PstI	CTGCAG	1 cut(s)	1053
PsuI	RGATCY	3 cut(s)	1759, 1912, 1930
PvuII	CAGCTG	1 cut(s)	53
RsaI	GTAC	2 cut(s)	1558, 1583
RsaNI	GTAC	2 cut(s)	1557, 1582
SacI	GAGCTC	2 cut(s)	926, 1650
SalI	GTCGAC	1 cut(s)	1897
SapI	GCTCTTC	3 cut(s)	781, 1657, 1674
SaqAI	TTAA	4 cut(s)	23, 1005, 1406, 1746
Sau3AI	GATC	7 cut(s)	1179, 1197, 1599, 1759, 1839, 1912, 1930
Sau96I	GGNCC	4 cut(s)	140, 412, 1056, 1789
SchI	GAGTC	8 cut(s)	569, 623, 1028, 1085, 1215, 1709, 1870, 1894
ScrFI	CCNGG	5 cut(s)	410, 524, 1245, 1442, 1793
SduI	GDGCHC	4 cut(s)	926, 1650, 1686, 1784
SfaNI	GCATC	5 cut(s)	491, 546, 819, 1435, 1912
SfcI	CTRYAG	1 cut(s)	1049
SfoI	GGCGCC	2 cut(s)	1312, 1575
SinI	GGWCC	1 cut(s)	1789
SmlI	CTYRAG	3 cut(s)	362, 1453, 1863
SmoI	CTYRAG	3 cut(s)	362, 1453, 1863
SpeI	ACTAGT	1 cut(s)	43
Sse9I	AATT	6 cut(s)	1008, 1037, 1064, 1387, 1471, 1743
SspDI	GGCGCC	2 cut(s)	1310, 1573
SspMI	CTAG	4 cut(s)	44, 77, 1353, 1904
SstI	GAGCTC	2 cut(s)	926, 1650
StyD4I	CCNGG	5 cut(s)	408, 522, 1243, 1440, 1791
StyI	CCWWGG	1 cut(s)	1461
TaaI	ACNGT	2 cut(s)	472, 1695
TaiI	ACGT	7 cut(s)	23, 132, 273, 569, 1161, 1362, 1551
TaqI	TCGA	8 cut(s)	93, 1119, 1494, 1614, 1802, 1849, 1883, 1898
TaqII	GACCGA	1 cut(s)	474
TasI	AATT	6 cut(s)	1008, 1037, 1064, 1387, 1471, 1743
TatI	WGTACW	1 cut(s)	1581
TauI	GCSGC	9 cut(s)	287, 521, 530, 533, 751, 774, 851, 879, 1136
TfiI	GAWTC	4 cut(s)	1086, 1230, 1888, 1940
Tru1I	TTAA	4 cut(s)	23, 1005, 1406, 1746
Tru9I	TTAA	4 cut(s)	23, 1005, 1406, 1746
TscAI	CASTG	2 cut(s)	475, 1372
TseFI	GTSAC	3 cut(s)	929, 1355, 1947
TseI	GCWGC	5 cut(s)	50, 64, 88, 629, 1428
Tsp45I	GTSAC	3 cut(s)	929, 1355, 1947
TspDTI	ATGAA	5 cut(s)	17, 23, 787, 1292, 1692
TspGWI	ACGGA	4 cut(s)	723, 729, 1090, 1608
TspRI	CASTG	2 cut(s)	475, 1372
VpaK11BI	GGWCC	1 cut(s)	1789
VspI	ATTAAT	1 cut(s)	1406
XapI	RAATTY	1 cut(s)	1037
XbaI	TCTAGA	1 cut(s)	1903
XcmI	CCANNNNNNNNNTGG	2 cut(s)	530, 1477
XmiI	GTMKAC	2 cut(s)	555, 1898
XspI	CTAG	4 cut(s)	44, 77, 1353, 1904
ZraI	GACGTC	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.