RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007876 RLG00000008120 RLG00000023540 |
| rosa_multiflora | Rmu_sc0000580.1_g000127 Rmu_sc0000898.1_g000092 Rmu_sc0001192.1_g000031 Rmu_sc0001955.1_g000036 Rmu_sc0003214.1_g000010 Rmu_sc0011910.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00043220 Rroxscaffold_2G00138050 Rroxscaffold_3G00261050 Rroxscaffold_3G00262520 Rroxscaffold_5G00347700 Rroxscaffold_5G00362210 |
| rosa_samantha | Rh3DG312600 Rh4BG267400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 380 |
| AccIII | TCCGGA | 1 cut(s) | 247 |
| AclWI | GGATC | 1 cut(s) | 365 |
| AcsI | RAATTY | 1 cut(s) | 256 |
| AcuI | CTGAAG | 1 cut(s) | 284 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 130, 289, 380 |
| AflIII | ACRYGT | 1 cut(s) | 231 |
| AjnI | CCWGG | 1 cut(s) | 373 |
| AluBI | AGCT | 2 cut(s) | 13, 201 |
| AluI | AGCT | 2 cut(s) | 13, 201 |
| AlwI | GGATC | 1 cut(s) | 365 |
| Aor13HI | TCCGGA | 1 cut(s) | 247 |
| ApeKI | GCWGC | 1 cut(s) | 279 |
| ApoI | RAATTY | 1 cut(s) | 256 |
| BauI | CACGAG | 1 cut(s) | 284 |
| BbvI | GCAGC | 1 cut(s) | 291 |
| BccI | CCATC | 5 cut(s) | 38, 101, 162, 187, 265 |
| BciT130I | CCWGG | 1 cut(s) | 375 |
| BclI | TGATCA | 1 cut(s) | 63 |
| BisI | GCNGC | 1 cut(s) | 280 |
| BlsI | GCNGC | 1 cut(s) | 281 |
| Bme1390I | CCNGG | 1 cut(s) | 375 |
| BmrFI | CCNGG | 1 cut(s) | 375 |
| BsaJI | CCNNGG | 1 cut(s) | 99 |
| BsaWI | WCCGGW | 1 cut(s) | 247 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 130, 289, 380 |
| Bse1I | ACTGG | 1 cut(s) | 124 |
| BseAI | TCCGGA | 1 cut(s) | 247 |
| BseBI | CCWGG | 1 cut(s) | 375 |
| BseDI | CCNNGG | 1 cut(s) | 99 |
| BseGI | GGATG | 2 cut(s) | 173, 304 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 130, 289, 380 |
| BseMII | CTCAG | 1 cut(s) | 130 |
| BseNI | ACTGG | 1 cut(s) | 124 |
| BseXI | GCAGC | 1 cut(s) | 291 |
| BsiSI | CCGG | 1 cut(s) | 248 |
| BslFI | GGGAC | 1 cut(s) | 172 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 130, 289, 380 |
| BsmFI | GGGAC | 1 cut(s) | 172 |
| Bsp13I | TCCGGA | 1 cut(s) | 247 |
| Bsp143I | GATC | 3 cut(s) | 63, 222, 370 |
| BspCNI | CTCAG | 1 cut(s) | 129 |
| BspEI | TCCGGA | 1 cut(s) | 247 |
| BspPI | GGATC | 1 cut(s) | 365 |
| BsrI | ACTGG | 1 cut(s) | 124 |
| BssECI | CCNNGG | 1 cut(s) | 99 |
| BssMI | GATC | 3 cut(s) | 63, 222, 370 |
| BssSI | CACGAG | 1 cut(s) | 284 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| Bst2BI | CACGAG | 1 cut(s) | 284 |
| Bst2UI | CCWGG | 1 cut(s) | 375 |
| Bst6I | CTCTTC | 1 cut(s) | 355 |
| BstC8I | GCNNGC | 1 cut(s) | 277 |
| BstDEI | CTNAG | 1 cut(s) | 116 |
| BstF5I | GGATG | 2 cut(s) | 173, 304 |
| BstKTI | GATC | 3 cut(s) | 66, 225, 373 |
| BstMBI | GATC | 3 cut(s) | 63, 222, 370 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstNI | CCWGG | 1 cut(s) | 375 |
| BstNSI | RCATGY | 1 cut(s) | 235 |
| BstSCI | CCNGG | 1 cut(s) | 373 |
| BstV1I | GCAGC | 1 cut(s) | 291 |
| BtgZI | GCGATG | 1 cut(s) | 165 |
| BtsCI | GGATG | 2 cut(s) | 173, 304 |
| BtsIMutI | CAGTG | 2 cut(s) | 124, 325 |
| Cac8I | GCNNGC | 1 cut(s) | 277 |
| CviAII | CATG | 1 cut(s) | 232 |
| CviJI | RGCY | 6 cut(s) | 13, 48, 115, 201, 242, 282 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 48, 115, 201, 242, 282 |
| DdeI | CTNAG | 1 cut(s) | 116 |
| DpnI | GATC | 3 cut(s) | 65, 224, 372 |
| DpnII | GATC | 3 cut(s) | 63, 222, 370 |
| Eam1104I | CTCTTC | 1 cut(s) | 355 |
| EarI | CTCTTC | 1 cut(s) | 355 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| Eco57I | CTGAAG | 1 cut(s) | 284 |
| EcoRI | GAATTC | 1 cut(s) | 256 |
| EcoRII | CCWGG | 1 cut(s) | 373 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| FaeI | CATG | 1 cut(s) | 235 |
| FaiI | YATR | 3 cut(s) | 62, 146, 233 |
| FaqI | GGGAC | 1 cut(s) | 172 |
| FatI | CATG | 1 cut(s) | 231 |
| FbaI | TGATCA | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 1 cut(s) | 280 |
| FokI | GGATG | 2 cut(s) | 180, 311 |
| Fsp4HI | GCNGC | 1 cut(s) | 280 |
| GluI | GCNGC | 1 cut(s) | 280 |
| HapII | CCGG | 1 cut(s) | 248 |
| Hin1II | CATG | 1 cut(s) | 235 |
| HinfI | GANTC | 2 cut(s) | 172, 251 |
| HpaII | CCGG | 1 cut(s) | 248 |
| Hpy188III | TCNNGA | 1 cut(s) | 248 |
| Hpy99I | CGWCG | 1 cut(s) | 218 |
| HpyAV | CCTTC | 2 cut(s) | 259, 350 |
| HpyCH4IV | ACGT | 1 cut(s) | 216 |
| HpyCH4V | TGCA | 1 cut(s) | 89 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 1 cut(s) | 116 |
| HpySE526I | ACGT | 1 cut(s) | 216 |
| Hsp92II | CATG | 1 cut(s) | 235 |
| Kpn2I | TCCGGA | 1 cut(s) | 247 |
| Ksp22I | TGATCA | 1 cut(s) | 63 |
| Kzo9I | GATC | 3 cut(s) | 63, 222, 370 |
| LpnPI | CCDG | 7 cut(s) | 13, 99, 137, 261, 316, 360, 387 |
| Lsp1109I | GCAGC | 1 cut(s) | 291 |
| MaeII | ACGT | 1 cut(s) | 216 |
| MaeIII | GTNAC | 2 cut(s) | 119, 139 |
| MalI | GATC | 3 cut(s) | 65, 224, 372 |
| MboI | GATC | 3 cut(s) | 63, 222, 370 |
| MboII | GAAGA | 2 cut(s) | 87, 372 |
| MluCI | AATT | 3 cut(s) | 256, 304, 384 |
| MlyI | GAGTC | 1 cut(s) | 260 |
| MmeI | TCCRAC | 1 cut(s) | 361 |
| MnlI | CCTC | 3 cut(s) | 67, 282, 328 |
| MroI | TCCGGA | 1 cut(s) | 247 |
| MslI | CAYNNNNRTG | 1 cut(s) | 59 |
| MspI | CCGG | 1 cut(s) | 248 |
| MspR9I | CCNGG | 1 cut(s) | 375 |
| MvaI | CCWGG | 1 cut(s) | 375 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NdeII | GATC | 3 cut(s) | 63, 222, 370 |
| NlaIII | CATG | 1 cut(s) | 235 |
| NmuCI | GTSAC | 2 cut(s) | 119, 139 |
| NspI | RCATGY | 1 cut(s) | 235 |
| PciI | ACATGT | 1 cut(s) | 231 |
| PfeI | GAWTC | 1 cut(s) | 172 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 380 |
| PkrI | GCNGC | 1 cut(s) | 281 |
| PleI | GAGTC | 1 cut(s) | 259 |
| PpsI | GAGTC | 1 cut(s) | 259 |
| PscI | ACATGT | 1 cut(s) | 231 |
| Psp6I | CCWGG | 1 cut(s) | 373 |
| PspGI | CCWGG | 1 cut(s) | 373 |
| RseI | CAYNNNNRTG | 1 cut(s) | 59 |
| SatI | GCNGC | 1 cut(s) | 280 |
| Sau3AI | GATC | 3 cut(s) | 63, 222, 370 |
| SchI | GAGTC | 1 cut(s) | 260 |
| ScrFI | CCNGG | 1 cut(s) | 375 |
| SetI | ASST | 7 cut(s) | 15, 32, 203, 219, 315, 339, 379 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 59 |
| Sse9I | AATT | 3 cut(s) | 256, 304, 384 |
| StyD4I | CCNGG | 1 cut(s) | 373 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TaiI | ACGT | 1 cut(s) | 219 |
| TaqI | TCGA | 2 cut(s) | 221, 254 |
| TasI | AATT | 3 cut(s) | 256, 304, 384 |
| TfiI | GAWTC | 1 cut(s) | 172 |
| TscAI | CASTG | 2 cut(s) | 124, 325 |
| TseFI | GTSAC | 2 cut(s) | 119, 139 |
| TseI | GCWGC | 1 cut(s) | 279 |
| Tsp45I | GTSAC | 2 cut(s) | 119, 139 |
| TspDTI | ATGAA | 1 cut(s) | 369 |
| TspRI | CASTG | 2 cut(s) | 124, 325 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 380 |
| XapI | RAATTY | 1 cut(s) | 256 |
| XceI | RCATGY | 1 cut(s) | 235 |