RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007876 RLG00000008120 RLG00000023540 |
| rosa_multiflora | Rmu_sc0000580.1_g000127 Rmu_sc0000898.1_g000092 Rmu_sc0001192.1_g000031 Rmu_sc0001955.1_g000036 Rmu_sc0003214.1_g000010 Rmu_sc0011910.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00043220 Rroxscaffold_2G00138050 Rroxscaffold_3G00261050 Rroxscaffold_3G00262520 Rroxscaffold_5G00347700 Rroxscaffold_5G00362210 |
| rosa_samantha | Rh3DG312600 Rh4BG267400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 128 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 19 |
| AgsI | TTSAA | 1 cut(s) | 82 |
| AluBI | AGCT | 1 cut(s) | 45 |
| AluI | AGCT | 1 cut(s) | 45 |
| AlwI | GGATC | 1 cut(s) | 128 |
| ApeKI | GCWGC | 1 cut(s) | 42 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 7, 39 |
| BbvI | GCAGC | 1 cut(s) | 54 |
| BccI | CCATC | 2 cut(s) | 27, 110 |
| BisI | GCNGC | 1 cut(s) | 43 |
| BlsI | GCNGC | 1 cut(s) | 44 |
| BmiI | GGNNCC | 1 cut(s) | 11 |
| BmsI | GCATC | 1 cut(s) | 207 |
| BsaJI | CCNNGG | 1 cut(s) | 144 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 111, 141 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 19 |
| BseDI | CCNNGG | 1 cut(s) | 144 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 19 |
| BseXI | GCAGC | 1 cut(s) | 54 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 19 |
| Bsp143I | GATC | 2 cut(s) | 133, 190 |
| BspLI | GGNNCC | 1 cut(s) | 11 |
| BspPI | GGATC | 1 cut(s) | 128 |
| BssECI | CCNNGG | 1 cut(s) | 144 |
| BssMI | GATC | 2 cut(s) | 133, 190 |
| Bst4CI | ACNGT | 1 cut(s) | 145 |
| Bst6I | CTCTTC | 1 cut(s) | 118 |
| BstDSI | CCRYGG | 1 cut(s) | 144 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstKTI | GATC | 2 cut(s) | 136, 193 |
| BstMBI | GATC | 2 cut(s) | 133, 190 |
| BstV1I | GCAGC | 1 cut(s) | 54 |
| BtgI | CCRYGG | 1 cut(s) | 144 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| CviJI | RGCY | 1 cut(s) | 45 |
| CviKI_1 | RGCY | 1 cut(s) | 45 |
| DpnI | GATC | 2 cut(s) | 135, 192 |
| DpnII | GATC | 2 cut(s) | 133, 190 |
| Eam1104I | CTCTTC | 1 cut(s) | 118 |
| EarI | CTCTTC | 1 cut(s) | 118 |
| FaiI | YATR | 1 cut(s) | 186 |
| Fnu4HI | GCNGC | 1 cut(s) | 43 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 1 cut(s) | 43 |
| GluI | GCNGC | 1 cut(s) | 43 |
| Hpy188I | TCNGA | 2 cut(s) | 195, 203 |
| Hpy99I | CGWCG | 1 cut(s) | 22 |
| HpyAV | CCTTC | 3 cut(s) | 21, 158, 206 |
| HpyCH4III | ACNGT | 1 cut(s) | 145 |
| Kzo9I | GATC | 2 cut(s) | 133, 190 |
| LmnI | GCTCC | 1 cut(s) | 195 |
| Lsp1109I | GCAGC | 1 cut(s) | 54 |
| LweI | GCATC | 1 cut(s) | 207 |
| MalI | GATC | 2 cut(s) | 135, 192 |
| MboI | GATC | 2 cut(s) | 133, 190 |
| MboII | GAAGA | 2 cut(s) | 135, 218 |
| MluCI | AATT | 2 cut(s) | 67, 155 |
| MmeI | TCCRAC | 1 cut(s) | 132 |
| MnlI | CCTC | 3 cut(s) | 45, 91, 113 |
| NdeII | GATC | 2 cut(s) | 133, 190 |
| NlaIV | GGNNCC | 1 cut(s) | 11 |
| PkrI | GCNGC | 1 cut(s) | 44 |
| PspN4I | GGNNCC | 1 cut(s) | 11 |
| SatI | GCNGC | 1 cut(s) | 43 |
| Sau3AI | GATC | 2 cut(s) | 133, 190 |
| SetI | ASST | 3 cut(s) | 47, 102, 142 |
| SfaNI | GCATC | 1 cut(s) | 207 |
| SgeI | CNNG | 4 cut(s) | 33, 61, 106, 157 |
| Sse9I | AATT | 2 cut(s) | 67, 155 |
| TaaI | ACNGT | 1 cut(s) | 145 |
| TaqI | TCGA | 1 cut(s) | 25 |
| TasI | AATT | 2 cut(s) | 67, 155 |
| TseI | GCWGC | 1 cut(s) | 42 |