RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007876 RLG00000008120 RLG00000023540 |
| rosa_multiflora | Rmu_sc0000580.1_g000127 Rmu_sc0000898.1_g000092 Rmu_sc0001192.1_g000031 Rmu_sc0001955.1_g000036 Rmu_sc0003214.1_g000010 Rmu_sc0011910.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00043220 Rroxscaffold_2G00138050 Rroxscaffold_3G00261050 Rroxscaffold_3G00262520 Rroxscaffold_5G00347700 Rroxscaffold_5G00362210 |
| rosa_samantha | Rh3DG312600 Rh4BG267400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 20, 62 |
| AclWI | GGATC | 1 cut(s) | 170 |
| AcoI | YGGCCR | 1 cut(s) | 183 |
| AcsI | RAATTY | 1 cut(s) | 28 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 61 |
| AgsI | TTSAA | 1 cut(s) | 280 |
| AluBI | AGCT | 2 cut(s) | 87, 265 |
| AluI | AGCT | 2 cut(s) | 87, 265 |
| Alw21I | GWGCWC | 1 cut(s) | 242 |
| AlwI | GGATC | 1 cut(s) | 170 |
| AoxI | GGCC | 1 cut(s) | 183 |
| ApeKI | GCWGC | 1 cut(s) | 84 |
| ApoI | RAATTY | 1 cut(s) | 28 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 20, 52 |
| AsuHPI | GGTGA | 2 cut(s) | 79, 137 |
| Bbv12I | GWGCWC | 1 cut(s) | 242 |
| BbvI | GCAGC | 1 cut(s) | 96 |
| BccI | CCATC | 3 cut(s) | 70, 152, 200 |
| BceAI | ACGGC | 3 cut(s) | 19, 75, 170 |
| BisI | GCNGC | 1 cut(s) | 85 |
| BlsI | GCNGC | 1 cut(s) | 86 |
| BmiI | GGNNCC | 1 cut(s) | 53 |
| BsaJI | CCNNGG | 2 cut(s) | 6, 186 |
| BsaWI | WCCGGW | 3 cut(s) | 54, 222, 242 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 153, 183 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 61 |
| Bse118I | RCCGGY | 1 cut(s) | 181 |
| BseDI | CCNNGG | 2 cut(s) | 6, 186 |
| BseGI | GGATG | 1 cut(s) | 109 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BseX3I | CGGCCG | 1 cut(s) | 183 |
| BseXI | GCAGC | 1 cut(s) | 96 |
| Bsh1285I | CGRYCG | 1 cut(s) | 186 |
| BshFI | GGCC | 1 cut(s) | 185 |
| BsiEI | CGRYCG | 1 cut(s) | 186 |
| BsiHKAI | GWGCWC | 1 cut(s) | 242 |
| BsiSI | CCGG | 5 cut(s) | 17, 55, 182, 223, 243 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BsnI | GGCC | 1 cut(s) | 185 |
| Bsp1286I | GDGCHC | 1 cut(s) | 242 |
| Bsp143I | GATC | 1 cut(s) | 175 |
| BspACI | CCGC | 2 cut(s) | 20, 62 |
| BspANI | GGCC | 1 cut(s) | 185 |
| BspLI | GGNNCC | 1 cut(s) | 53 |
| BspPI | GGATC | 1 cut(s) | 170 |
| BsrFI | RCCGGY | 1 cut(s) | 181 |
| BssAI | RCCGGY | 1 cut(s) | 181 |
| BssECI | CCNNGG | 2 cut(s) | 6, 186 |
| BssMI | GATC | 1 cut(s) | 175 |
| Bst6I | CTCTTC | 1 cut(s) | 160 |
| BstDSI | CCRYGG | 2 cut(s) | 6, 186 |
| BstF5I | GGATG | 1 cut(s) | 109 |
| BstKTI | GATC | 1 cut(s) | 178 |
| BstMBI | GATC | 1 cut(s) | 175 |
| BstMCI | CGRYCG | 1 cut(s) | 186 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BstV1I | GCAGC | 1 cut(s) | 96 |
| BstZI | CGGCCG | 1 cut(s) | 183 |
| BsuRI | GGCC | 1 cut(s) | 185 |
| BtgI | CCRYGG | 2 cut(s) | 6, 186 |
| BtsCI | GGATG | 1 cut(s) | 109 |
| Cfr10I | RCCGGY | 1 cut(s) | 181 |
| CviJI | RGCY | 4 cut(s) | 11, 87, 185, 265 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 87, 185, 265 |
| DpnI | GATC | 1 cut(s) | 177 |
| DpnII | GATC | 1 cut(s) | 175 |
| EaeI | YGGCCR | 1 cut(s) | 183 |
| EagI | CGGCCG | 1 cut(s) | 183 |
| Eam1104I | CTCTTC | 1 cut(s) | 160 |
| EarI | CTCTTC | 1 cut(s) | 160 |
| EclXI | CGGCCG | 1 cut(s) | 183 |
| Eco52I | CGGCCG | 1 cut(s) | 183 |
| EcoRI | GAATTC | 1 cut(s) | 28 |
| FaiI | YATR | 1 cut(s) | 228 |
| FauI | CCCGC | 2 cut(s) | 13, 55 |
| Fnu4HI | GCNGC | 1 cut(s) | 85 |
| FokI | GGATG | 1 cut(s) | 116 |
| Fsp4HI | GCNGC | 1 cut(s) | 85 |
| GluI | GCNGC | 1 cut(s) | 85 |
| HaeIII | GGCC | 1 cut(s) | 185 |
| HapII | CCGG | 5 cut(s) | 17, 55, 182, 223, 243 |
| HpaII | CCGG | 5 cut(s) | 17, 55, 182, 223, 243 |
| HphI | GGTGA | 2 cut(s) | 79, 137 |
| Hpy99I | CGWCG | 1 cut(s) | 40 |
| HpyAV | CCTTC | 1 cut(s) | 248 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| Kzo9I | GATC | 1 cut(s) | 175 |
| LmnI | GCTCC | 1 cut(s) | 237 |
| LpnPI | CCDG | 5 cut(s) | 30, 68, 195, 236, 256 |
| Lsp1109I | GCAGC | 1 cut(s) | 96 |
| MalI | GATC | 1 cut(s) | 177 |
| MboI | GATC | 1 cut(s) | 175 |
| MboII | GAAGA | 5 cut(s) | 52, 82, 85, 177, 260 |
| MhlI | GDGCHC | 1 cut(s) | 242 |
| MluCI | AATT | 4 cut(s) | 28, 109, 197, 270 |
| MmeI | TCCRAC | 1 cut(s) | 174 |
| MnlI | CCTC | 3 cut(s) | 87, 133, 155 |
| MseI | TTAA | 1 cut(s) | 273 |
| MspI | CCGG | 5 cut(s) | 17, 55, 182, 223, 243 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NdeII | GATC | 1 cut(s) | 175 |
| NlaIV | GGNNCC | 1 cut(s) | 53 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 32 |
| PkrI | GCNGC | 1 cut(s) | 86 |
| PspN4I | GGNNCC | 1 cut(s) | 53 |
| SaqAI | TTAA | 1 cut(s) | 273 |
| SatI | GCNGC | 1 cut(s) | 85 |
| Sau3AI | GATC | 1 cut(s) | 175 |
| SduI | GDGCHC | 1 cut(s) | 242 |
| SetI | ASST | 3 cut(s) | 89, 144, 267 |
| Sse9I | AATT | 4 cut(s) | 28, 109, 197, 270 |
| SsiI | CCGC | 2 cut(s) | 20, 62 |
| TaqI | TCGA | 2 cut(s) | 26, 38 |
| TasI | AATT | 4 cut(s) | 28, 109, 197, 270 |
| Tru1I | TTAA | 1 cut(s) | 273 |
| Tru9I | TTAA | 1 cut(s) | 273 |
| TseI | GCWGC | 1 cut(s) | 84 |
| TspDTI | ATGAA | 1 cut(s) | 267 |
| XapI | RAATTY | 1 cut(s) | 28 |