RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007876 RLG00000008120 RLG00000023540 |
| rosa_multiflora | Rmu_sc0000580.1_g000127 Rmu_sc0000898.1_g000092 Rmu_sc0001192.1_g000031 Rmu_sc0001955.1_g000036 Rmu_sc0003214.1_g000010 Rmu_sc0011910.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00043220 Rroxscaffold_2G00138050 Rroxscaffold_3G00261050 Rroxscaffold_3G00262520 Rroxscaffold_5G00347700 Rroxscaffold_5G00362210 |
| rosa_samantha | Rh3DG312600 Rh4BG267400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 20, 62 |
| AclWI | GGATC | 1 cut(s) | 167 |
| AcsI | RAATTY | 1 cut(s) | 28 |
| AcuI | CTGAAG | 1 cut(s) | 89 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 61 |
| AgsI | TTSAA | 2 cut(s) | 28, 121 |
| AluBI | AGCT | 2 cut(s) | 11, 87 |
| AluI | AGCT | 2 cut(s) | 11, 87 |
| Alw21I | GWGCWC | 1 cut(s) | 239 |
| AlwI | GGATC | 1 cut(s) | 167 |
| ApeKI | GCWGC | 1 cut(s) | 84 |
| ApoI | RAATTY | 1 cut(s) | 28 |
| Bbv12I | GWGCWC | 1 cut(s) | 239 |
| BbvI | GCAGC | 1 cut(s) | 96 |
| BccI | CCATC | 2 cut(s) | 70, 149 |
| BisI | GCNGC | 1 cut(s) | 85 |
| BlsI | GCNGC | 1 cut(s) | 86 |
| BmiI | GGNNCC | 1 cut(s) | 53 |
| BsaJI | CCNNGG | 1 cut(s) | 183 |
| BsaWI | WCCGGW | 2 cut(s) | 219, 239 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 150, 180 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 61 |
| BseDI | CCNNGG | 1 cut(s) | 183 |
| BseGI | GGATG | 1 cut(s) | 109 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BseXI | GCAGC | 1 cut(s) | 96 |
| Bsh1285I | CGRYCG | 1 cut(s) | 183 |
| BsiEI | CGRYCG | 1 cut(s) | 183 |
| BsiHKAI | GWGCWC | 1 cut(s) | 239 |
| BsiSI | CCGG | 3 cut(s) | 17, 220, 240 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 61 |
| Bsp1286I | GDGCHC | 1 cut(s) | 239 |
| Bsp143I | GATC | 2 cut(s) | 172, 229 |
| BspACI | CCGC | 2 cut(s) | 20, 62 |
| BspLI | GGNNCC | 1 cut(s) | 53 |
| BspPI | GGATC | 1 cut(s) | 167 |
| BssECI | CCNNGG | 1 cut(s) | 183 |
| BssMI | GATC | 2 cut(s) | 172, 229 |
| Bst4CI | ACNGT | 1 cut(s) | 184 |
| Bst6I | CTCTTC | 1 cut(s) | 157 |
| BstDSI | CCRYGG | 1 cut(s) | 183 |
| BstF5I | GGATG | 1 cut(s) | 109 |
| BstKTI | GATC | 2 cut(s) | 175, 232 |
| BstMBI | GATC | 2 cut(s) | 172, 229 |
| BstMCI | CGRYCG | 1 cut(s) | 183 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BstV1I | GCAGC | 1 cut(s) | 96 |
| BtgI | CCRYGG | 1 cut(s) | 183 |
| BtsCI | GGATG | 1 cut(s) | 109 |
| CviJI | RGCY | 3 cut(s) | 11, 67, 87 |
| CviKI_1 | RGCY | 3 cut(s) | 11, 67, 87 |
| DpnI | GATC | 2 cut(s) | 174, 231 |
| DpnII | GATC | 2 cut(s) | 172, 229 |
| Eam1104I | CTCTTC | 1 cut(s) | 157 |
| EarI | CTCTTC | 1 cut(s) | 157 |
| Eco57I | CTGAAG | 1 cut(s) | 89 |
| FaiI | YATR | 2 cut(s) | 90, 225 |
| FauI | CCCGC | 2 cut(s) | 13, 55 |
| Fnu4HI | GCNGC | 1 cut(s) | 85 |
| FokI | GGATG | 1 cut(s) | 116 |
| Fsp4HI | GCNGC | 1 cut(s) | 85 |
| GluI | GCNGC | 1 cut(s) | 85 |
| HapII | CCGG | 3 cut(s) | 17, 220, 240 |
| HpaII | CCGG | 3 cut(s) | 17, 220, 240 |
| Hpy188I | TCNGA | 1 cut(s) | 234 |
| HpyAV | CCTTC | 3 cut(s) | 64, 197, 245 |
| HpyCH4III | ACNGT | 1 cut(s) | 184 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| Kzo9I | GATC | 2 cut(s) | 172, 229 |
| LmnI | GCTCC | 1 cut(s) | 234 |
| LpnPI | CCDG | 5 cut(s) | 30, 68, 118, 233, 253 |
| Lsp1109I | GCAGC | 1 cut(s) | 96 |
| MalI | GATC | 2 cut(s) | 174, 231 |
| MboI | GATC | 2 cut(s) | 172, 229 |
| MboII | GAAGA | 2 cut(s) | 174, 257 |
| MhlI | GDGCHC | 1 cut(s) | 239 |
| MluCI | AATT | 2 cut(s) | 28, 194 |
| MmeI | TCCRAC | 1 cut(s) | 171 |
| MnlI | CCTC | 4 cut(s) | 51, 87, 130, 152 |
| MspI | CCGG | 3 cut(s) | 17, 220, 240 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NdeII | GATC | 2 cut(s) | 172, 229 |
| NlaIV | GGNNCC | 1 cut(s) | 53 |
| PkrI | GCNGC | 1 cut(s) | 86 |
| PspN4I | GGNNCC | 1 cut(s) | 53 |
| SatI | GCNGC | 1 cut(s) | 85 |
| Sau3AI | GATC | 2 cut(s) | 172, 229 |
| SduI | GDGCHC | 1 cut(s) | 239 |
| SetI | ASST | 3 cut(s) | 13, 89, 141 |
| SgeI | CNNG | 8 cut(s) | 29, 33, 67, 75, 145, 196, 232, 252 |
| Sse9I | AATT | 2 cut(s) | 28, 194 |
| SsiI | CCGC | 2 cut(s) | 20, 62 |
| TaaI | ACNGT | 1 cut(s) | 184 |
| TasI | AATT | 2 cut(s) | 28, 194 |
| TseI | GCWGC | 1 cut(s) | 84 |
| XapI | RAATTY | 1 cut(s) | 28 |