RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007876 RLG00000008120 RLG00000023540 |
| rosa_multiflora | Rmu_sc0000580.1_g000127 Rmu_sc0000898.1_g000092 Rmu_sc0001192.1_g000031 Rmu_sc0001955.1_g000036 Rmu_sc0003214.1_g000010 Rmu_sc0011910.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00043220 Rroxscaffold_2G00138050 Rroxscaffold_3G00261050 Rroxscaffold_3G00262520 Rroxscaffold_5G00347700 Rroxscaffold_5G00362210 |
| rosa_samantha | Rh3DG312600 Rh4BG267400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 57, 59 |
| AciI | CCGC | 4 cut(s) | 55, 59, 101, 262 |
| AclWI | GGATC | 1 cut(s) | 209 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 100 |
| AflIII | ACRYGT | 1 cut(s) | 38 |
| AluBI | AGCT | 2 cut(s) | 8, 126 |
| AluI | AGCT | 2 cut(s) | 8, 126 |
| AlwI | GGATC | 1 cut(s) | 209 |
| ApeKI | GCWGC | 1 cut(s) | 123 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 59, 91 |
| AspLEI | GCGC | 1 cut(s) | 59 |
| BbvI | GCAGC | 1 cut(s) | 135 |
| BccI | CCATC | 2 cut(s) | 109, 191 |
| BceAI | ACGGC | 2 cut(s) | 114, 209 |
| BisI | GCNGC | 1 cut(s) | 124 |
| BlsI | GCNGC | 1 cut(s) | 125 |
| BmiI | GGNNCC | 1 cut(s) | 92 |
| BsaJI | CCNNGG | 1 cut(s) | 225 |
| BsaWI | WCCGGW | 1 cut(s) | 281 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 192, 222 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 100 |
| BseDI | CCNNGG | 1 cut(s) | 225 |
| BseGI | GGATG | 1 cut(s) | 148 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 100 |
| BseXI | GCAGC | 1 cut(s) | 135 |
| Bsh1236I | CGCG | 2 cut(s) | 57, 59 |
| BsiSI | CCGG | 1 cut(s) | 282 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 100 |
| Bsp143I | GATC | 3 cut(s) | 29, 214, 271 |
| BspACI | CCGC | 4 cut(s) | 55, 59, 101, 262 |
| BspFNI | CGCG | 2 cut(s) | 57, 59 |
| BspLI | GGNNCC | 1 cut(s) | 92 |
| BspPI | GGATC | 1 cut(s) | 209 |
| BssECI | CCNNGG | 1 cut(s) | 225 |
| BssMI | GATC | 3 cut(s) | 29, 214, 271 |
| Bst6I | CTCTTC | 1 cut(s) | 199 |
| BstDSI | CCRYGG | 1 cut(s) | 225 |
| BstF5I | GGATG | 1 cut(s) | 148 |
| BstFNI | CGCG | 2 cut(s) | 57, 59 |
| BstHHI | GCGC | 1 cut(s) | 59 |
| BstKTI | GATC | 3 cut(s) | 32, 217, 274 |
| BstMBI | GATC | 3 cut(s) | 29, 214, 271 |
| BstNSI | RCATGY | 1 cut(s) | 42 |
| BstUI | CGCG | 2 cut(s) | 57, 59 |
| BstV1I | GCAGC | 1 cut(s) | 135 |
| BtgI | CCRYGG | 1 cut(s) | 225 |
| BtsCI | GGATG | 1 cut(s) | 148 |
| BtsIMutI | CAGTG | 2 cut(s) | 50, 169 |
| CfoI | GCGC | 1 cut(s) | 59 |
| CviAII | CATG | 1 cut(s) | 39 |
| CviJI | RGCY | 5 cut(s) | 8, 49, 106, 126, 224 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 49, 106, 126, 224 |
| DpnI | GATC | 3 cut(s) | 31, 216, 273 |
| DpnII | GATC | 3 cut(s) | 29, 214, 271 |
| Eam1104I | CTCTTC | 1 cut(s) | 199 |
| EarI | CTCTTC | 1 cut(s) | 199 |
| EcoRI | GAATTC | 1 cut(s) | 67 |
| FaeI | CATG | 1 cut(s) | 42 |
| FaiI | YATR | 3 cut(s) | 11, 40, 267 |
| FatI | CATG | 1 cut(s) | 38 |
| FauI | CCCGC | 2 cut(s) | 52, 94 |
| Fnu4HI | GCNGC | 1 cut(s) | 124 |
| FokI | GGATG | 1 cut(s) | 155 |
| Fsp4HI | GCNGC | 1 cut(s) | 124 |
| GlaI | GCGC | 1 cut(s) | 58 |
| GluI | GCNGC | 1 cut(s) | 124 |
| HapII | CCGG | 1 cut(s) | 282 |
| HhaI | GCGC | 1 cut(s) | 59 |
| Hin1II | CATG | 1 cut(s) | 42 |
| Hin6I | GCGC | 1 cut(s) | 57 |
| HinP1I | GCGC | 1 cut(s) | 57 |
| HpaII | CCGG | 1 cut(s) | 282 |
| Hpy99I | CGWCG | 1 cut(s) | 25 |
| HpyAV | CCTTC | 2 cut(s) | 239, 287 |
| HpyCH4IV | ACGT | 1 cut(s) | 23 |
| HpySE526I | ACGT | 1 cut(s) | 23 |
| Hsp92II | CATG | 1 cut(s) | 42 |
| HspAI | GCGC | 1 cut(s) | 57 |
| Kzo9I | GATC | 3 cut(s) | 29, 214, 271 |
| LpnPI | CCDG | 4 cut(s) | 107, 160, 234, 295 |
| Lsp1109I | GCAGC | 1 cut(s) | 135 |
| MaeII | ACGT | 1 cut(s) | 23 |
| MalI | GATC | 3 cut(s) | 31, 216, 273 |
| MboI | GATC | 3 cut(s) | 29, 214, 271 |
| MboII | GAAGA | 3 cut(s) | 91, 216, 299 |
| MluCI | AATT | 3 cut(s) | 67, 148, 236 |
| MmeI | TCCRAC | 1 cut(s) | 213 |
| MnlI | CCTC | 3 cut(s) | 126, 172, 194 |
| MslI | CAYNNNNRTG | 1 cut(s) | 43 |
| MspI | CCGG | 1 cut(s) | 282 |
| MvnI | CGCG | 2 cut(s) | 57, 59 |
| NdeII | GATC | 3 cut(s) | 29, 214, 271 |
| NlaIII | CATG | 1 cut(s) | 42 |
| NlaIV | GGNNCC | 1 cut(s) | 92 |
| NspI | RCATGY | 1 cut(s) | 42 |
| PciI | ACATGT | 1 cut(s) | 38 |
| PkrI | GCNGC | 1 cut(s) | 125 |
| PscI | ACATGT | 1 cut(s) | 38 |
| PspN4I | GGNNCC | 1 cut(s) | 92 |
| RseI | CAYNNNNRTG | 1 cut(s) | 43 |
| SatI | GCNGC | 1 cut(s) | 124 |
| Sau3AI | GATC | 3 cut(s) | 29, 214, 271 |
| SetI | ASST | 4 cut(s) | 10, 26, 128, 183 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 43 |
| Sse9I | AATT | 3 cut(s) | 67, 148, 236 |
| SsiI | CCGC | 4 cut(s) | 55, 59, 101, 262 |
| TaiI | ACGT | 1 cut(s) | 26 |
| TaqI | TCGA | 4 cut(s) | 28, 65, 77, 274 |
| TasI | AATT | 3 cut(s) | 67, 148, 236 |
| TscAI | CASTG | 2 cut(s) | 50, 169 |
| TseI | GCWGC | 1 cut(s) | 123 |
| TspDTI | ATGAA | 1 cut(s) | 26 |
| TspRI | CASTG | 2 cut(s) | 50, 169 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XceI | RCATGY | 1 cut(s) | 42 |