WD domain, G-beta repeat
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom02g04870 |
| rosa_laevigata | RLG00000001366 RLG00000005704 RLG00000014469 RLG00000029408 RLG00000032893 |
| rosa_multiflora | Rmu_sc0010439.1_g000010 Rmu_sc0012364.1_g000001 |
| rosa_samantha | Rh1AG021900 Rh1BG031600 Rh2BG062100 Rh2CG064000 Rh2DG062400 Rh3CG081500 Rh5BG107600 Rh5DG198600 Rh7DG166800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 137 |
| AccBSI | CCGCTC | 1 cut(s) | 243 |
| AciI | CCGC | 3 cut(s) | 241, 262, 300 |
| AclWI | GGATC | 4 cut(s) | 132, 253, 277, 412 |
| AcuI | CTGAAG | 1 cut(s) | 163 |
| AcyI | GRCGYC | 1 cut(s) | 134 |
| AfaI | GTAC | 1 cut(s) | 436 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 490 |
| AgsI | TTSAA | 4 cut(s) | 36, 79, 526, 575 |
| AhlI | ACTAGT | 1 cut(s) | 188 |
| AjnI | CCWGG | 1 cut(s) | 483 |
| AluBI | AGCT | 3 cut(s) | 9, 277, 507 |
| AluI | AGCT | 3 cut(s) | 9, 277, 507 |
| AlwI | GGATC | 4 cut(s) | 132, 253, 277, 412 |
| Ama87I | CYCGRG | 1 cut(s) | 316 |
| AoxI | GGCC | 2 cut(s) | 144, 387 |
| ApeKI | GCWGC | 2 cut(s) | 160, 163 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 492 |
| AspS9I | GGNCC | 1 cut(s) | 253 |
| AsuHPI | GGTGA | 3 cut(s) | 205, 424, 473 |
| AvaI | CYCGRG | 1 cut(s) | 316 |
| AvaII | GGWCC | 1 cut(s) | 253 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 540, 573 |
| BanII | GRGCYC | 1 cut(s) | 323 |
| BbsI | GAAGAC | 1 cut(s) | 62 |
| BbvI | GCAGC | 2 cut(s) | 147, 150 |
| BccI | CCATC | 1 cut(s) | 412 |
| BceAI | ACGGC | 4 cut(s) | 39, 68, 287, 353 |
| BciT130I | CCWGG | 1 cut(s) | 485 |
| BcuI | ACTAGT | 1 cut(s) | 188 |
| BfaI | CTAG | 2 cut(s) | 189, 464 |
| BfmI | CTRYAG | 1 cut(s) | 511 |
| BisI | GCNGC | 3 cut(s) | 161, 164, 300 |
| BlsI | GCNGC | 3 cut(s) | 162, 165, 301 |
| BmcAI | AGTACT | 1 cut(s) | 436 |
| Bme1390I | CCNGG | 1 cut(s) | 485 |
| Bme18I | GGWCC | 1 cut(s) | 253 |
| BmeT110I | CYCGRG | 1 cut(s) | 316 |
| BmgT120I | GGNCC | 1 cut(s) | 253 |
| BmiI | GGNNCC | 2 cut(s) | 255, 322 |
| BmrFI | CCNGG | 1 cut(s) | 485 |
| BpiI | GAAGAC | 1 cut(s) | 62 |
| BpmI | CTGGAG | 1 cut(s) | 389 |
| BsaHI | GRCGYC | 1 cut(s) | 134 |
| BsaJI | CCNNGG | 4 cut(s) | 39, 61, 265, 315 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 490 |
| Bse118I | RCCGGY | 2 cut(s) | 215, 363 |
| Bse1I | ACTGG | 1 cut(s) | 442 |
| BseBI | CCWGG | 1 cut(s) | 485 |
| BseDI | CCNNGG | 4 cut(s) | 39, 61, 265, 315 |
| BseGI | GGATG | 1 cut(s) | 550 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 490 |
| BseMII | CTCAG | 3 cut(s) | 158, 240, 287 |
| BseNI | ACTGG | 1 cut(s) | 442 |
| BseRI | GAGGAG | 1 cut(s) | 218 |
| BseXI | GCAGC | 2 cut(s) | 147, 150 |
| BshFI | GGCC | 2 cut(s) | 146, 389 |
| BsiHKCI | CYCGRG | 1 cut(s) | 316 |
| BsiSI | CCGG | 3 cut(s) | 216, 324, 364 |
| BslFI | GGGAC | 1 cut(s) | 512 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 490 |
| BsmFI | GGGAC | 1 cut(s) | 512 |
| BsnI | GGCC | 2 cut(s) | 146, 389 |
| BsoBI | CYCGRG | 1 cut(s) | 316 |
| Bsp1286I | GDGCHC | 1 cut(s) | 323 |
| Bsp143I | GATC | 4 cut(s) | 124, 258, 269, 404 |
| Bsp19I | CCATGG | 1 cut(s) | 61 |
| BspACI | CCGC | 3 cut(s) | 241, 262, 300 |
| BspANI | GGCC | 2 cut(s) | 146, 389 |
| BspCNI | CTCAG | 3 cut(s) | 159, 241, 286 |
| BspLI | GGNNCC | 2 cut(s) | 255, 322 |
| BspPI | GGATC | 4 cut(s) | 132, 253, 277, 412 |
| BsrBI | CCGCTC | 1 cut(s) | 243 |
| BsrFI | RCCGGY | 2 cut(s) | 215, 363 |
| BsrI | ACTGG | 1 cut(s) | 442 |
| BssAI | RCCGGY | 2 cut(s) | 215, 363 |
| BssECI | CCNNGG | 4 cut(s) | 39, 61, 265, 315 |
| BssMI | GATC | 4 cut(s) | 124, 258, 269, 404 |
| BssNI | GRCGYC | 1 cut(s) | 134 |
| BssT1I | CCWWGG | 3 cut(s) | 39, 61, 265 |
| Bst2UI | CCWGG | 1 cut(s) | 485 |
| Bst4CI | ACNGT | 3 cut(s) | 75, 556, 579 |
| BstACI | GRCGYC | 1 cut(s) | 134 |
| BstDEI | CTNAG | 3 cut(s) | 167, 249, 273 |
| BstDSI | CCRYGG | 1 cut(s) | 61 |
| BstEII | GGTNACC | 1 cut(s) | 359 |
| BstF5I | GGATG | 1 cut(s) | 550 |
| BstKTI | GATC | 4 cut(s) | 127, 261, 272, 407 |
| BstMBI | GATC | 4 cut(s) | 124, 258, 269, 404 |
| BstNI | CCWGG | 1 cut(s) | 485 |
| BstPI | GGTNACC | 1 cut(s) | 359 |
| BstSCI | CCNGG | 1 cut(s) | 483 |
| BstSFI | CTRYAG | 1 cut(s) | 511 |
| BstV1I | GCAGC | 2 cut(s) | 147, 150 |
| BstV2I | GAAGAC | 1 cut(s) | 62 |
| BstX2I | RGATCY | 3 cut(s) | 124, 269, 404 |
| BstYI | RGATCY | 3 cut(s) | 124, 269, 404 |
| BsuRI | GGCC | 2 cut(s) | 146, 389 |
| BtgI | CCRYGG | 1 cut(s) | 61 |
| BtsCI | GGATG | 1 cut(s) | 550 |
| BtsIMutI | CAGTG | 1 cut(s) | 71 |
| Cfr10I | RCCGGY | 2 cut(s) | 215, 363 |
| Cfr13I | GGNCC | 1 cut(s) | 253 |
| Csp6I | GTAC | 1 cut(s) | 435 |
| CviAII | CATG | 4 cut(s) | 62, 98, 451, 537 |
| CviQI | GTAC | 1 cut(s) | 435 |
| DdeI | CTNAG | 3 cut(s) | 167, 249, 273 |
| DpnI | GATC | 4 cut(s) | 126, 260, 271, 406 |
| DpnII | GATC | 4 cut(s) | 124, 258, 269, 404 |
| EciI | GGCGGA | 1 cut(s) | 251 |
| Eco130I | CCWWGG | 3 cut(s) | 39, 61, 265 |
| Eco147I | AGGCCT | 1 cut(s) | 389 |
| Eco24I | GRGCYC | 1 cut(s) | 323 |
| Eco47I | GGWCC | 1 cut(s) | 253 |
| Eco57I | CTGAAG | 1 cut(s) | 163 |
| Eco88I | CYCGRG | 1 cut(s) | 316 |
| Eco91I | GGTNACC | 1 cut(s) | 359 |
| EcoO109I | RGGNCCY | 1 cut(s) | 253 |
| EcoO65I | GGTNACC | 1 cut(s) | 359 |
| EcoRII | CCWGG | 1 cut(s) | 483 |
| EcoT14I | CCWWGG | 3 cut(s) | 39, 61, 265 |
| EcoT38I | GRGCYC | 1 cut(s) | 323 |
| ErhI | CCWWGG | 3 cut(s) | 39, 61, 265 |
| FaeI | CATG | 4 cut(s) | 65, 101, 454, 540 |
| FaiI | YATR | 6 cut(s) | 63, 99, 452, 503, 513, 538 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 30 |
| FaqI | GGGAC | 1 cut(s) | 512 |
| FatI | CATG | 4 cut(s) | 61, 97, 450, 536 |
| Fnu4HI | GCNGC | 3 cut(s) | 161, 164, 300 |
| FokI | GGATG | 1 cut(s) | 557 |
| FriOI | GRGCYC | 1 cut(s) | 323 |
| Fsp4HI | GCNGC | 3 cut(s) | 161, 164, 300 |
| FspBI | CTAG | 2 cut(s) | 189, 464 |
| GluI | GCNGC | 3 cut(s) | 161, 164, 300 |
| GsuI | CTGGAG | 1 cut(s) | 389 |
| HaeIII | GGCC | 2 cut(s) | 146, 389 |
| HapII | CCGG | 3 cut(s) | 216, 324, 364 |
| Hin1I | GRCGYC | 1 cut(s) | 134 |
| Hin1II | CATG | 4 cut(s) | 65, 101, 454, 540 |
| HincII | GTYRAC | 1 cut(s) | 132 |
| HindII | GTYRAC | 1 cut(s) | 132 |
| HindIII | AAGCTT | 1 cut(s) | 505 |
| HinfI | GANTC | 4 cut(s) | 371, 382, 473, 488 |
| HpaII | CCGG | 3 cut(s) | 216, 324, 364 |
| HphI | GGTGA | 3 cut(s) | 205, 424, 473 |
| Hpy166II | GTNNAC | 1 cut(s) | 132 |
| Hpy188I | TCNGA | 4 cut(s) | 21, 89, 186, 544 |
| Hpy188III | TCNNGA | 1 cut(s) | 497 |
| Hpy8I | GTNNAC | 1 cut(s) | 132 |
| Hpy99I | CGWCG | 4 cut(s) | 139, 154, 157, 203 |
| HpyCH4III | ACNGT | 3 cut(s) | 75, 556, 579 |
| HpyCH4IV | ACGT | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 3 cut(s) | 167, 249, 273 |
| HpySE526I | ACGT | 1 cut(s) | 134 |
| Hsp92I | GRCGYC | 1 cut(s) | 134 |
| Hsp92II | CATG | 4 cut(s) | 65, 101, 454, 540 |
| Kzo9I | GATC | 4 cut(s) | 124, 258, 269, 404 |
| LmnI | GCTCC | 2 cut(s) | 282, 326 |
| Lsp1109I | GCAGC | 2 cut(s) | 147, 150 |
| MaeI | CTAG | 2 cut(s) | 189, 464 |
| MaeII | ACGT | 1 cut(s) | 134 |
| MaeIII | GTNAC | 3 cut(s) | 191, 359, 446 |
| MalI | GATC | 4 cut(s) | 126, 260, 271, 406 |
| MbiI | CCGCTC | 1 cut(s) | 243 |
| MboI | GATC | 4 cut(s) | 124, 258, 269, 404 |
| MboII | GAAGA | 2 cut(s) | 6, 67 |
| MfeI | CAATTG | 1 cut(s) | 399 |
| MflI | RGATCY | 3 cut(s) | 124, 269, 404 |
| MhlI | GDGCHC | 1 cut(s) | 323 |
| MluCI | AATT | 1 cut(s) | 399 |
| MlyI | GAGTC | 1 cut(s) | 380 |
| MmeI | TCCRAC | 1 cut(s) | 209 |
| MnlI | CCTC | 9 cut(s) | 37, 157, 164, 196, 199, 244, 325, 400, 415 |
| MroXI | GAANNNNTTC | 1 cut(s) | 492 |
| MseI | TTAA | 2 cut(s) | 468, 558 |
| MspI | CCGG | 3 cut(s) | 216, 324, 364 |
| MspR9I | CCNGG | 1 cut(s) | 485 |
| MunI | CAATTG | 1 cut(s) | 399 |
| MvaI | CCWGG | 1 cut(s) | 485 |
| NcoI | CCATGG | 1 cut(s) | 61 |
| NdeII | GATC | 4 cut(s) | 124, 258, 269, 404 |
| NlaIII | CATG | 4 cut(s) | 65, 101, 454, 540 |
| NlaIV | GGNNCC | 2 cut(s) | 255, 322 |
| NmeAIII | GCCGAG | 1 cut(s) | 122 |
| NmuCI | GTSAC | 1 cut(s) | 191 |
| PceI | AGGCCT | 1 cut(s) | 389 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 149 |
| PdmI | GAANNNNTTC | 1 cut(s) | 492 |
| PfeI | GAWTC | 3 cut(s) | 382, 473, 488 |
| PflFI | GACNNNGTC | 1 cut(s) | 197 |
| PkrI | GCNGC | 3 cut(s) | 162, 165, 301 |
| PleI | GAGTC | 1 cut(s) | 379 |
| PpsI | GAGTC | 1 cut(s) | 379 |
| PpuMI | RGGWCCY | 1 cut(s) | 253 |
| Psp5II | RGGWCCY | 1 cut(s) | 253 |
| Psp6I | CCWGG | 1 cut(s) | 483 |
| PspEI | GGTNACC | 1 cut(s) | 359 |
| PspGI | CCWGG | 1 cut(s) | 483 |
| PspN4I | GGNNCC | 2 cut(s) | 255, 322 |
| PspPI | GGNCC | 1 cut(s) | 253 |
| PspPPI | RGGWCCY | 1 cut(s) | 253 |
| PsuI | RGATCY | 3 cut(s) | 124, 269, 404 |
| PsyI | GACNNNGTC | 1 cut(s) | 197 |
| RsaI | GTAC | 1 cut(s) | 436 |
| RsaNI | GTAC | 1 cut(s) | 435 |
| SaqAI | TTAA | 2 cut(s) | 468, 558 |
| SatI | GCNGC | 3 cut(s) | 161, 164, 300 |
| Sau3AI | GATC | 4 cut(s) | 124, 258, 269, 404 |
| Sau96I | GGNCC | 1 cut(s) | 253 |
| ScaI | AGTACT | 1 cut(s) | 436 |
| SchI | GAGTC | 1 cut(s) | 380 |
| ScrFI | CCNGG | 1 cut(s) | 485 |
| SduI | GDGCHC | 1 cut(s) | 323 |
| SetI | ASST | 8 cut(s) | 11, 41, 137, 175, 210, 279, 333, 509 |
| SfcI | CTRYAG | 1 cut(s) | 511 |
| SinI | GGWCC | 1 cut(s) | 253 |
| SpeI | ACTAGT | 1 cut(s) | 188 |
| Sse9I | AATT | 1 cut(s) | 399 |
| SseBI | AGGCCT | 1 cut(s) | 389 |
| SsiI | CCGC | 3 cut(s) | 241, 262, 300 |
| SspMI | CTAG | 2 cut(s) | 189, 464 |
| StuI | AGGCCT | 1 cut(s) | 389 |
| StyD4I | CCNGG | 1 cut(s) | 483 |
| StyI | CCWWGG | 3 cut(s) | 39, 61, 265 |
| TaaI | ACNGT | 3 cut(s) | 75, 556, 579 |
| TaiI | ACGT | 1 cut(s) | 137 |
| TaqI | TCGA | 4 cut(s) | 201, 222, 245, 380 |
| TasI | AATT | 1 cut(s) | 399 |
| TatI | WGTACW | 1 cut(s) | 434 |
| TauI | GCSGC | 1 cut(s) | 302 |
| TfiI | GAWTC | 3 cut(s) | 382, 473, 488 |
| Tru1I | TTAA | 2 cut(s) | 468, 558 |
| Tru9I | TTAA | 2 cut(s) | 468, 558 |
| TscAI | CASTG | 1 cut(s) | 78 |
| TseFI | GTSAC | 1 cut(s) | 191 |
| TseI | GCWGC | 2 cut(s) | 160, 163 |
| Tsp45I | GTSAC | 1 cut(s) | 191 |
| TspDTI | ATGAA | 3 cut(s) | 467, 486, 525 |
| TspGWI | ACGGA | 1 cut(s) | 269 |
| TspRI | CASTG | 1 cut(s) | 78 |
| Tth111I | GACNNNGTC | 1 cut(s) | 197 |
| VpaK11BI | GGWCC | 1 cut(s) | 253 |
| XmnI | GAANNNNTTC | 1 cut(s) | 492 |
| XspI | CTAG | 2 cut(s) | 189, 464 |
| ZraI | GACGTC | 1 cut(s) | 135 |
| ZrmI | AGTACT | 1 cut(s) | 436 |