RLG00000029408

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
38294728 .. 38295243
516 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029408

Sequence Viewer

Length: 315 bp
ATGATCTACTTTGGACCAGCTCGACCAGATGCAACTACTTTGGAGTCAGAGCTTCGAACACCGACGAGAAACATAACGAGGTCTCTTCTGGGCTCACCCAAAACCCATTTCAAGAGACTGGTGTTGATAATCGGTGTGGCGGTTGTTATTGTAGTTGTGAATCAGTGTTTTGAGCTTCCCTTTGGTAAAAATATTTACTTTTCACCTGCTGATACTGGTTCAGCTTCAGTGGTCACATTGTTGGGTAATGTTACTAGTTCAAATGATTCGGAGTCTGAGAAGTTTGATGTTGTTGGTAGCAGGGATAGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.2

Weight (kDa)

6.55

Isoelectric Point (pI)

51.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 214
Acc36I ACCTGC 1 cut(s) 214
AciI CCGC 1 cut(s) 140
AcuI CTGAAG 1 cut(s) 210
AgsI TTSAA 2 cut(s) 112, 261
AhlI ACTAGT 1 cut(s) 254
AjuI GAANNNNNNNTTGG 2 cut(s) 92, 124
AluBI AGCT 4 cut(s) 20, 52, 175, 224
AluI AGCT 4 cut(s) 20, 52, 175, 224
Alw26I GTCTC 2 cut(s) 87, 109
AspS9I GGNCC 1 cut(s) 14
AsuHPI GGTGA 2 cut(s) 87, 195
AsuII TTCGAA 1 cut(s) 55
AvaII GGWCC 1 cut(s) 14
BanII GRGCYC 1 cut(s) 95
BcoDI GTCTC 2 cut(s) 87, 109
BcuI ACTAGT 1 cut(s) 254
BfaI CTAG 1 cut(s) 255
BfuAI ACCTGC 1 cut(s) 214
Bme18I GGWCC 1 cut(s) 14
BmgT120I GGNCC 1 cut(s) 14
BmsI GCATC 1 cut(s) 19
Bpu14I TTCGAA 1 cut(s) 55
BsaI GGTCTC 1 cut(s) 87
Bse1I ACTGG 2 cut(s) 123, 220
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 2 cut(s) 123, 220
BsmAI GTCTC 2 cut(s) 87, 109
Bso31I GGTCTC 1 cut(s) 87
Bsp119I TTCGAA 1 cut(s) 55
Bsp1286I GDGCHC 1 cut(s) 95
Bsp143I GATC 1 cut(s) 3
BspACI CCGC 1 cut(s) 140
BspCNI CTCAG 1 cut(s) 268
BspMI ACCTGC 1 cut(s) 214
BspT104I TTCGAA 1 cut(s) 55
BspTNI GGTCTC 1 cut(s) 87
BsrI ACTGG 2 cut(s) 123, 220
BssMI GATC 1 cut(s) 3
Bst6I CTCTTC 1 cut(s) 90
BstBI TTCGAA 1 cut(s) 55
BstDEI CTNAG 1 cut(s) 276
BstKTI GATC 1 cut(s) 6
BstMAI GTCTC 2 cut(s) 87, 109
BstMBI GATC 1 cut(s) 3
BtsIMutI CAGTG 2 cut(s) 170, 234
BveI ACCTGC 1 cut(s) 214
Cfr13I GGNCC 1 cut(s) 14
CviJI RGCY 5 cut(s) 20, 52, 93, 175, 224
CviKI_1 RGCY 5 cut(s) 20, 52, 93, 175, 224
DdeI CTNAG 1 cut(s) 276
DpnI GATC 1 cut(s) 5
DpnII GATC 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 90
EarI CTCTTC 1 cut(s) 90
Eco24I GRGCYC 1 cut(s) 95
Eco31I GGTCTC 1 cut(s) 87
Eco47I GGWCC 1 cut(s) 14
Eco57I CTGAAG 1 cut(s) 210
EcoT38I GRGCYC 1 cut(s) 95
FaiI YATR 1 cut(s) 74
FriOI GRGCYC 1 cut(s) 95
FspBI CTAG 1 cut(s) 255
HinfI GANTC 4 cut(s) 44, 160, 266, 272
HphI GGTGA 2 cut(s) 87, 195
Hpy188I TCNGA 3 cut(s) 49, 271, 277
Hpy188III TCNNGA 1 cut(s) 112
Hpy99I CGWCG 1 cut(s) 67
HpyCH4V TGCA 1 cut(s) 32
HpyF3I CTNAG 1 cut(s) 276
Kzo9I GATC 1 cut(s) 3
LpnPI CCDG 7 cut(s) 30, 39, 74, 104, 201, 219, 286
LweI GCATC 1 cut(s) 19
MaeI CTAG 1 cut(s) 255
MaeIII GTNAC 2 cut(s) 232, 250
MalI GATC 1 cut(s) 5
MboI GATC 1 cut(s) 3
MboII GAAGA 1 cut(s) 77
MhlI GDGCHC 1 cut(s) 95
MlyI GAGTC 2 cut(s) 53, 281
MnlI CCTC 1 cut(s) 72
MseI TTAA 1 cut(s) 313
NdeII GATC 1 cut(s) 3
NmuCI GTSAC 1 cut(s) 232
NspV TTCGAA 1 cut(s) 55
PaqCI CACCTGC 1 cut(s) 214
PfeI GAWTC 2 cut(s) 160, 266
PleI GAGTC 2 cut(s) 52, 280
PpsI GAGTC 2 cut(s) 52, 280
PspPI GGNCC 1 cut(s) 14
SaqAI TTAA 1 cut(s) 313
Sau3AI GATC 1 cut(s) 3
Sau96I GGNCC 1 cut(s) 14
SchI GAGTC 2 cut(s) 53, 281
SduI GDGCHC 1 cut(s) 95
SetI ASST 6 cut(s) 22, 54, 83, 177, 208, 226
SfaNI GCATC 1 cut(s) 19
SfuI TTCGAA 1 cut(s) 55
SinI GGWCC 1 cut(s) 14
SpeI ACTAGT 1 cut(s) 254
SsiI CCGC 1 cut(s) 140
SspI AATATT 1 cut(s) 193
SspMI CTAG 1 cut(s) 255
TaqI TCGA 2 cut(s) 22, 55
TfiI GAWTC 2 cut(s) 160, 266
Tru1I TTAA 1 cut(s) 313
Tru9I TTAA 1 cut(s) 313
TscAI CASTG 2 cut(s) 170, 234
TseFI GTSAC 1 cut(s) 232
Tsp45I GTSAC 1 cut(s) 232
TspRI CASTG 2 cut(s) 170, 234
VpaK11BI GGWCC 1 cut(s) 14
XspI CTAG 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.