Rh3CG081500

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
6351099 .. 6351719
621 bp
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UTR
Exon/CDS
Intron
Rh3CG081500.1

Sequence Viewer

Length: 378 bp
ATGGGTGTTGCTGCTCTAACCCAGAGACTATGCAACTTTGAAATCCGGAGACTGGTGTTGATAATCAGTGTGGCGGTTGTTATTGTAGTTGTGAATCAGTGTTTTGAGCTTCCCTTTGGTAAAAATGTTTACTTTTCACCTGTTGATACTGGTTCAGCTTCAGTGGTCACATTGTTGGGTAATGTTACTAGTTCAAATGATTCGGAGTCTGGGAAGTTTGATGTTGTTGGTGTAGTGGGGATAGTGGTTAATGCTACTGGTGGTTTAGAGTTAGAGGAGTTTGAGTTGGAGAAAGATGCAAGTAATGTAACTGTTGAGAAGAGTTTTCCGGCTTTTGATTTAGGTGCCCAAATCGTTTTTTTTTTTTTTTTTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

125

Amino Acids

13.46

Weight (kDa)

4.33

Isoelectric Point (pI)

22.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 344
AccIII TCCGGA 1 cut(s) 45
AciI CCGC 1 cut(s) 74
AcuI CTGAAG 1 cut(s) 144
AfiI CCNNNNNNNGG 1 cut(s) 52
AgsI TTSAA 2 cut(s) 41, 195
AhlI ACTAGT 1 cut(s) 188
AluBI AGCT 2 cut(s) 109, 158
AluI AGCT 2 cut(s) 109, 158
Alw26I GTCTC 2 cut(s) 19, 43
Aor13HI TCCGGA 1 cut(s) 45
ApeKI GCWGC 1 cut(s) 11
AsuHPI GGTGA 1 cut(s) 129
BaeGI GKGCMC 1 cut(s) 349
BanI GGYRCC 1 cut(s) 344
BcoDI GTCTC 2 cut(s) 19, 43
BcuI ACTAGT 1 cut(s) 188
BfaI CTAG 1 cut(s) 189
BisI GCNGC 1 cut(s) 12
BlsI GCNGC 1 cut(s) 13
BmiI GGNNCC 1 cut(s) 346
BmsI GCATC 1 cut(s) 286
BsaWI WCCGGW 1 cut(s) 45
BsaXI ACNNNNNCTCC 2 cut(s) 269, 299
Bsc4I CCNNNNNNNGG 1 cut(s) 52
Bse1I ACTGG 3 cut(s) 57, 154, 262
BseAI TCCGGA 1 cut(s) 45
BseLI CCNNNNNNNGG 1 cut(s) 52
BseNI ACTGG 3 cut(s) 57, 154, 262
BseRI GAGGAG 1 cut(s) 290
BseSI GKGCMC 1 cut(s) 349
BshNI GGYRCC 1 cut(s) 344
BsiSI CCGG 2 cut(s) 46, 329
BslI CCNNNNNNNGG 1 cut(s) 52
BsmAI GTCTC 2 cut(s) 19, 43
Bsp1286I GDGCHC 1 cut(s) 349
Bsp13I TCCGGA 1 cut(s) 45
BspACI CCGC 1 cut(s) 74
BspEI TCCGGA 1 cut(s) 45
BspLI GGNNCC 1 cut(s) 346
BspT107I GGYRCC 1 cut(s) 344
BsrI ACTGG 3 cut(s) 57, 154, 262
Bst4CI ACNGT 1 cut(s) 313
Bst6I CTCTTC 1 cut(s) 314
BstMAI GTCTC 2 cut(s) 19, 43
BstSLI GKGCMC 1 cut(s) 349
BtsIMutI CAGTG 3 cut(s) 73, 104, 168
CviJI RGCY 3 cut(s) 109, 158, 332
CviKI_1 RGCY 3 cut(s) 109, 158, 332
Eam1104I CTCTTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 314
Eco57I CTGAAG 1 cut(s) 144
FaiI YATR 1 cut(s) 31
Fnu4HI GCNGC 1 cut(s) 12
Fsp4HI GCNGC 1 cut(s) 12
FspBI CTAG 1 cut(s) 189
GluI GCNGC 1 cut(s) 12
HapII CCGG 2 cut(s) 46, 329
HinfI GANTC 3 cut(s) 94, 200, 206
HpaII CCGG 2 cut(s) 46, 329
HphI GGTGA 1 cut(s) 129
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 1 cut(s) 205
Hpy188III TCNNGA 1 cut(s) 46
Hpy8I GTNNAC 1 cut(s) 130
HpyCH4III ACNGT 1 cut(s) 313
HpyCH4V TGCA 2 cut(s) 33, 299
Kpn2I TCCGGA 1 cut(s) 45
LpnPI CCDG 8 cut(s) 35, 38, 59, 135, 153, 195, 243, 342
LweI GCATC 1 cut(s) 286
MaeI CTAG 1 cut(s) 189
MaeIII GTNAC 3 cut(s) 166, 184, 307
MboII GAAGA 1 cut(s) 331
MhlI GDGCHC 1 cut(s) 349
MlyI GAGTC 1 cut(s) 215
MmeI TCCRAC 1 cut(s) 267
MnlI CCTC 1 cut(s) 268
MroI TCCGGA 1 cut(s) 45
MseI TTAA 1 cut(s) 249
MspI CCGG 2 cut(s) 46, 329
NlaIV GGNNCC 1 cut(s) 346
NmuCI GTSAC 1 cut(s) 166
PfeI GAWTC 2 cut(s) 94, 200
PkrI GCNGC 1 cut(s) 13
PleI GAGTC 1 cut(s) 214
PpsI GAGTC 1 cut(s) 214
PspN4I GGNNCC 1 cut(s) 346
SaqAI TTAA 1 cut(s) 249
SatI GCNGC 1 cut(s) 12
SchI GAGTC 1 cut(s) 215
SduI GDGCHC 1 cut(s) 349
SetI ASST 4 cut(s) 111, 142, 160, 346
SfaNI GCATC 1 cut(s) 286
SpeI ACTAGT 1 cut(s) 188
SsiI CCGC 1 cut(s) 74
SspMI CTAG 1 cut(s) 189
TaaI ACNGT 1 cut(s) 313
TfiI GAWTC 2 cut(s) 94, 200
Tru1I TTAA 1 cut(s) 249
Tru9I TTAA 1 cut(s) 249
TscAI CASTG 3 cut(s) 73, 104, 168
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 1 cut(s) 11
Tsp45I GTSAC 1 cut(s) 166
TspRI CASTG 3 cut(s) 73, 104, 168
XspI CTAG 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.