RLG00000032893

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
20551233 .. 20551816
584 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032893

Sequence Viewer

Length: 318 bp
ATGGGTGTTGCTGCTCTAACCCAGAGACTATGCAACTTTGAAATCCGGAGACTGGTGTTGATAATCGGTGTGGCGGTTGTTATTGTAGTTGTGAATCAGTGTTTTGAGCTTCCCTTTGGTAAAAATGTTTACTTTTCACCTGCTGATACTGGTTCAACTTCAGTGGTCACATTGTTGGGTAATGTTACTAGTTCAAATGATTCGGAGTCTGGGAAGTTTGATGTTGTTGGTATAGTGGGGATAGTGGTTAATGATACTGGTGGTTTAGAGTTAAAGGAGTTTGAGTTGGAGAAAGATGCAAATCGTTTTTTAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

11.29

Weight (kDa)

4.79

Isoelectric Point (pI)

15.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 148
Acc36I ACCTGC 1 cut(s) 148
AccIII TCCGGA 1 cut(s) 45
AciI CCGC 1 cut(s) 74
AcuI CTGAAG 1 cut(s) 144
AfiI CCNNNNNNNGG 1 cut(s) 52
AgsI TTSAA 3 cut(s) 41, 156, 195
AhlI ACTAGT 1 cut(s) 188
AluBI AGCT 1 cut(s) 109
AluI AGCT 1 cut(s) 109
Alw26I GTCTC 2 cut(s) 19, 43
Aor13HI TCCGGA 1 cut(s) 45
ApeKI GCWGC 1 cut(s) 11
AsuHPI GGTGA 1 cut(s) 129
BcoDI GTCTC 2 cut(s) 19, 43
BcuI ACTAGT 1 cut(s) 188
BfaI CTAG 1 cut(s) 189
BfuAI ACCTGC 1 cut(s) 148
BisI GCNGC 1 cut(s) 12
BlsI GCNGC 1 cut(s) 13
BmsI GCATC 1 cut(s) 286
BsaBI GATNNNNATC 1 cut(s) 300
BsaWI WCCGGW 1 cut(s) 45
BsaXI ACNNNNNCTCC 2 cut(s) 269, 299
Bsc4I CCNNNNNNNGG 1 cut(s) 52
Bse1I ACTGG 3 cut(s) 57, 154, 262
Bse8I GATNNNNATC 1 cut(s) 300
BseAI TCCGGA 1 cut(s) 45
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 1 cut(s) 52
BseNI ACTGG 3 cut(s) 57, 154, 262
BsiSI CCGG 1 cut(s) 46
BslI CCNNNNNNNGG 1 cut(s) 52
BsmAI GTCTC 2 cut(s) 19, 43
Bsp13I TCCGGA 1 cut(s) 45
BspACI CCGC 1 cut(s) 74
BspEI TCCGGA 1 cut(s) 45
BspMI ACCTGC 1 cut(s) 148
BsrI ACTGG 3 cut(s) 57, 154, 262
BstMAI GTCTC 2 cut(s) 19, 43
BtsIMutI CAGTG 2 cut(s) 104, 168
BveI ACCTGC 1 cut(s) 148
CspCI CAANNNNNGTGG 2 cut(s) 144, 179
CviJI RGCY 1 cut(s) 109
CviKI_1 RGCY 1 cut(s) 109
DraI TTTAAA 1 cut(s) 312
Eco57I CTGAAG 1 cut(s) 144
FaiI YATR 2 cut(s) 31, 233
Fnu4HI GCNGC 1 cut(s) 12
Fsp4HI GCNGC 1 cut(s) 12
FspBI CTAG 1 cut(s) 189
GluI GCNGC 1 cut(s) 12
HapII CCGG 1 cut(s) 46
HinfI GANTC 3 cut(s) 94, 200, 206
HpaII CCGG 1 cut(s) 46
HphI GGTGA 1 cut(s) 129
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 1 cut(s) 205
Hpy188III TCNNGA 1 cut(s) 46
Hpy8I GTNNAC 1 cut(s) 130
HpyCH4V TGCA 2 cut(s) 33, 299
Kpn2I TCCGGA 1 cut(s) 45
LpnPI CCDG 7 cut(s) 35, 38, 59, 135, 153, 195, 243
LweI GCATC 1 cut(s) 286
MaeI CTAG 1 cut(s) 189
MaeIII GTNAC 2 cut(s) 166, 184
MlyI GAGTC 1 cut(s) 215
MmeI TCCRAC 1 cut(s) 267
MroI TCCGGA 1 cut(s) 45
MseI TTAA 3 cut(s) 249, 272, 311
MspI CCGG 1 cut(s) 46
NmuCI GTSAC 1 cut(s) 166
PaqCI CACCTGC 1 cut(s) 148
PfeI GAWTC 2 cut(s) 94, 200
PkrI GCNGC 1 cut(s) 13
PleI GAGTC 1 cut(s) 214
PpsI GAGTC 1 cut(s) 214
SaqAI TTAA 3 cut(s) 249, 272, 311
SatI GCNGC 1 cut(s) 12
SchI GAGTC 1 cut(s) 215
SetI ASST 2 cut(s) 111, 142
SfaNI GCATC 1 cut(s) 286
SgeI CNNG 8 cut(s) 34, 58, 65, 152, 162, 201, 222, 270
SpeI ACTAGT 1 cut(s) 188
SsiI CCGC 1 cut(s) 74
SspMI CTAG 1 cut(s) 189
TfiI GAWTC 2 cut(s) 94, 200
Tru1I TTAA 3 cut(s) 249, 272, 311
Tru9I TTAA 3 cut(s) 249, 272, 311
TscAI CASTG 2 cut(s) 104, 168
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 1 cut(s) 11
Tsp45I GTSAC 1 cut(s) 166
TspRI CASTG 2 cut(s) 104, 168
XspI CTAG 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.