RLG00000014983

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
60305240 .. 60305563
324 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014983

Sequence Viewer

Length: 324 bp
ATGGAAGGAAGTAGAAAAAAGGAGGAAAGAGGTGACAACCGACGCCACTTTGATAGATCTGATAAGCAATTTGGGGGAGACAGGGTGCGTTACAGGGGAGAAGCGCAGAGAGGTGCCTTTCCTTCGAGGGAAAGGTACACCAATGGCGGTGCTGGCCGCAACTATAGAGGAAGAGATAGATTTGGTGAGAAGCAAGGGTATCATGCTACTGGTGGTCGTGTTGAGAAATGGGAACATGATTTATATCACGAGGCTAACAGGAGTCCAACACCAAAAAATGAAGAGGATCAAATTGCCAAGGTCGAAACACTTTTGGCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

12.46

Weight (kDa)

9.69

Isoelectric Point (pI)

34.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011131)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 113
AciI CCGC 2 cut(s) 147, 157
AclWI GGATC 1 cut(s) 294
AcoI YGGCCR 1 cut(s) 154
AcyI GRCGYC 1 cut(s) 43
AfaI GTAC 1 cut(s) 137
Alw26I GTCTC 1 cut(s) 72
AlwI GGATC 1 cut(s) 294
AoxI GGCC 1 cut(s) 154
AspLEI GCGC 1 cut(s) 106
AsuHPI GGTGA 2 cut(s) 44, 197
BanI GGYRCC 1 cut(s) 113
BauI CACGAG 1 cut(s) 248
BcoDI GTCTC 1 cut(s) 72
BfmI CTRYAG 1 cut(s) 163
BglII AGATCT 1 cut(s) 56
BisI GCNGC 1 cut(s) 157
BlsI GCNGC 1 cut(s) 158
BmiI GGNNCC 1 cut(s) 115
BsaBI GATNNNNATC 1 cut(s) 243
BsaHI GRCGYC 1 cut(s) 43
BsaJI CCNNGG 1 cut(s) 297
BsaXI ACNNNNNCTCC 2 cut(s) 69, 99
Bse1I ACTGG 1 cut(s) 214
Bse8I GATNNNNATC 1 cut(s) 243
BseDI CCNNGG 1 cut(s) 297
BseJI GATNNNNATC 1 cut(s) 243
BseNI ACTGG 1 cut(s) 214
BshFI GGCC 1 cut(s) 156
BshNI GGYRCC 1 cut(s) 113
BsmAI GTCTC 1 cut(s) 72
BsnI GGCC 1 cut(s) 156
Bsp143I GATC 2 cut(s) 56, 286
BspACI CCGC 2 cut(s) 147, 157
BspANI GGCC 1 cut(s) 156
BspLI GGNNCC 1 cut(s) 115
BspPI GGATC 1 cut(s) 294
BspT107I GGYRCC 1 cut(s) 113
BsrI ACTGG 1 cut(s) 214
BssECI CCNNGG 1 cut(s) 297
BssMI GATC 2 cut(s) 56, 286
BssNI GRCGYC 1 cut(s) 43
BssSI CACGAG 1 cut(s) 248
BssT1I CCWWGG 1 cut(s) 297
Bst2BI CACGAG 1 cut(s) 248
Bst6I CTCTTC 2 cut(s) 166, 276
BstACI GRCGYC 1 cut(s) 43
BstC8I GCNNGC 1 cut(s) 154
BstHHI GCGC 1 cut(s) 106
BstKTI GATC 2 cut(s) 59, 289
BstMAI GTCTC 1 cut(s) 72
BstMBI GATC 2 cut(s) 56, 286
BstMWI GCNNNNNNNGC 1 cut(s) 153
BstSFI CTRYAG 1 cut(s) 163
BstX2I RGATCY 1 cut(s) 56
BstYI RGATCY 1 cut(s) 56
BsuRI GGCC 1 cut(s) 156
Cac8I GCNNGC 1 cut(s) 154
CfoI GCGC 1 cut(s) 106
CseI GACGC 1 cut(s) 51
Csp6I GTAC 1 cut(s) 136
CviAII CATG 2 cut(s) 203, 236
CviJI RGCY 3 cut(s) 156, 254, 317
CviKI_1 RGCY 3 cut(s) 156, 254, 317
CviQI GTAC 1 cut(s) 136
DpnI GATC 2 cut(s) 58, 288
DpnII GATC 2 cut(s) 56, 286
EaeI YGGCCR 1 cut(s) 154
Eam1104I CTCTTC 2 cut(s) 166, 276
EarI CTCTTC 2 cut(s) 166, 276
Eco130I CCWWGG 1 cut(s) 297
EcoT14I CCWWGG 1 cut(s) 297
ErhI CCWWGG 1 cut(s) 297
FaeI CATG 2 cut(s) 206, 239
FaiI YATR 5 cut(s) 165, 204, 237, 244, 322
FatI CATG 2 cut(s) 202, 235
Fnu4HI GCNGC 1 cut(s) 157
Fsp4HI GCNGC 1 cut(s) 157
GlaI GCGC 1 cut(s) 105
GluI GCNGC 1 cut(s) 157
HaeIII GGCC 1 cut(s) 156
HgaI GACGC 1 cut(s) 51
HhaI GCGC 1 cut(s) 106
Hin1I GRCGYC 1 cut(s) 43
Hin1II CATG 2 cut(s) 206, 239
Hin6I GCGC 1 cut(s) 104
HinP1I GCGC 1 cut(s) 104
HinfI GANTC 1 cut(s) 262
HphI GGTGA 2 cut(s) 44, 197
Hpy166II GTNNAC 1 cut(s) 138
Hpy188I TCNGA 1 cut(s) 61
Hpy188III TCNNGA 1 cut(s) 248
Hpy8I GTNNAC 1 cut(s) 138
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 1 cut(s) 132
HpyF10VI GCNNNNNNNGC 1 cut(s) 153
Hsp92I GRCGYC 1 cut(s) 43
Hsp92II CATG 2 cut(s) 206, 239
HspAI GCGC 1 cut(s) 104
Kzo9I GATC 2 cut(s) 56, 286
LpnPI CCDG 5 cut(s) 67, 79, 138, 195, 244
MaeIII GTNAC 2 cut(s) 32, 89
MalI GATC 2 cut(s) 58, 288
MboI GATC 2 cut(s) 56, 286
MboII GAAGA 2 cut(s) 183, 293
MflI RGATCY 1 cut(s) 56
MluCI AATT 2 cut(s) 68, 291
MlyI GAGTC 1 cut(s) 271
MmeI TCCRAC 1 cut(s) 290
MnlI CCTC 7 cut(s) 16, 23, 104, 120, 161, 244, 277
MwoI GCNNNNNNNGC 1 cut(s) 153
NdeII GATC 2 cut(s) 56, 286
NlaIII CATG 2 cut(s) 206, 239
NlaIV GGNNCC 1 cut(s) 115
NmuCI GTSAC 1 cut(s) 32
PkrI GCNGC 1 cut(s) 158
PleI GAGTC 1 cut(s) 270
PpsI GAGTC 1 cut(s) 270
PspN4I GGNNCC 1 cut(s) 115
PsuI RGATCY 1 cut(s) 56
RsaI GTAC 1 cut(s) 137
RsaNI GTAC 1 cut(s) 136
SatI GCNGC 1 cut(s) 157
Sau3AI GATC 2 cut(s) 56, 286
SchI GAGTC 1 cut(s) 271
SetI ASST 4 cut(s) 34, 115, 137, 303
SfcI CTRYAG 1 cut(s) 163
Sse9I AATT 2 cut(s) 68, 291
SsiI CCGC 2 cut(s) 147, 157
StyI CCWWGG 1 cut(s) 297
TaqI TCGA 2 cut(s) 125, 303
TasI AATT 2 cut(s) 68, 291
TauI GCSGC 1 cut(s) 159
TseFI GTSAC 1 cut(s) 32
Tsp45I GTSAC 1 cut(s) 32
TspDTI ATGAA 2 cut(s) 294, 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.