Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001556

Physical Location & Seq

Genomic Coordinates Reverse (-)

5970813 .. 5973691

Gene Structure 2879 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016373

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGCCGATCCTTCTTCATGTGCTCATTGCAGCATCTATGAGAGATTGGACTGGACAGAGTCTGCTCACCGTGATGAGATCTTGGCTGTGCTTTCGAGGCTCGAAAGCAAAGGCAAAGGATTTGTGCAACCCCAGCAACTTGTTGCTGAGTTTGAAGCAATCCCTGAAGCCTTTGGAGAAGTTTCAAAGAACATTCAGGAAGCTGCTGTTCTATCTCCATACCTAGCCCTCGCTCTTCGTCCAAGGCCCGGTGTTTGGGAACACATCCGAATCAACATGAAGACACTCGAGGTTGAGGAGTTGCCTGTGGCTGAGTTCTTGAAGATGAAGGAGGAACTCGTCGATGGAAGTGCCAATGCAGGCTTTGTGCTGGAGTTGGACTTTGAGCCATTCAATGCTTCAGTTCCCAAACCAACTCTTTCCAAGTCCATTGGAAATGGCGTTGAGTACCTCAACCGCCACCTCTCTGCAAAGCTCTTCACTGAGCCGAAGAGCATGCATCCAGTGTTGCTCGAGCTTCTCCGCCTTCACACCCATGACGGCAAGAACCTGATGCTGAATGACAACATTGAGGATGTGGAAGAACTCCAACATGTTCTCATGGTGGTGGAGAAGTATCTCTCTTCACTAGACCTCGGAACTCCGTATGAAGCTTTTGAGCATAAGTTGCAAGATCTTGGCTTGGAGAGAGGTTGGGGAAACAATGCTGAGTGTGTGCTTGAAACGATCCGGCTTCTCTTGGACCTTCTTGTGGCACCAGATGCTTGCAATCTTGAGAAATTCATCAGCAAGATCCCCTTGGTCTTTAATGTTGTGATCATGTCTCCCCATGGTTATTTTGCACAAGACAATGTCTTGGGATATCCTGACACTGGTGGCCAGGTTGTTTATATCTTGGATCAAGTGCGTGCTTTGGAGAATGAGATGCTTAAGCGTATCAAGGAACAAGGGCTTGATATCACCCCTCGCATTCTTATTGTTACAAGGCTCCTTCCTGATGCTGTCGGGACTACTTGCGGTCAGCGTCTTGAGAGGGTGTATGGAACTGAATATTCAGATATTATCCGTGTTCCTTTCAGAACAGAGAAGGGAATTGTCCGTAGATGGATCTCAAGATTTGAAGTCTGGCCATATCTAGAGACTTACACTGAGGAGTTCCAGGGCAAGCCTGATCTTATCGTCGGAAACTACAGTGATGGAAACATTGTGGCCTCGTTGTTGGCACACAAATTTGATGTTACTCAGTGCACCATTGCTCATGCCTTGGAGAAGACAAAGTACCCTGATTCTGACTTGTACTGGAAGAAACTTGAGGACAAGTACCACTTCTCTTGCCAGTTCACAGCTGATCTCATTGCCATGAACCAGACCAATTTCATTATCACAAGTACCTTCCAAGAGATTGCTGGAAGCAAAGACACTGTTGGTCAATATGAGACTCACATTGCCTTCACAATGCCTGGCCTCTACCGCGTTGTCAATGGTATAGATTGCTTCGATCCCAAGTTCAACATTGTTTCCCCAGGAGCTGACATGGACATTTACTTCCCGTACACTGAGAAGGAAAGACGGTTGACATCATTCCACCCCGAAATCGAAGAGCTCATCTACAGCCAAGTTGAGAATAAAGAACACTTGTGTGTCTTGAATGACAGGAACAAGCCCATCATCTTCACAATGGCAAGGCTTGACCGTGTGAAGAACATCACCGGGCTTGTGGAATGGTATGGCAAGAATGCCAAGCTTAGGGAGTTGGTTAACCTTGTGGTTGTGGCTGGGGATCGGCGAAAGGAGTCCAAGGACAACGAGGAGAAGGCTGAGATGAAGAAGATGTACGAGCTCATTGACACCTACAAGTTGAATGGACAGTTCAGATGGATTTCTTCTCAGATGAACCGCGTGAGGAACGGTGAGCTCTACCGCTATATTGCTGACACTAAAGGAGCTTTTGTGCAACCTGCTGTCTATGAAGCCTTTGGCTTGACTGTTGTGGAGGCCATGACTTGTGGATTGCCTACCTTTGCTACTTGCAAAGGCGGCCCGGCTGAGATTATTGTGAATGGCAAATCCGGCTACCACATTGATCCATATCATGGTGACAAAGCTGCTGAGATCCTTGTTGACTTCTTTCAGAAGTGCAAGGTTGATCCTTCTCACTGGGACAAGATCTCCCAAGGAGGCTTGAAGCGTATTGAAGAGAAGTATACTTGGCAGATTTACTCTGAGAGGCTGCTGACCCTGACCGGAGTTTATGGCTTCTGGAAGCATGTTTCTAACCTTGACGAGAAGCGTCGCTACATAGAAATGTTGTATGCCCTCCGGTATAAGAAATCGGTTGAGTCTGTTCCTCTTGCTGAAGAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0001666 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008194 GO:0009266 GO:0009409 GO:0009413 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010037 GO:0010038 GO:0010154 GO:0010431 GO:0010555 GO:0016020 GO:0016043 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0021700 GO:0022414 GO:0022607 GO:0030054 GO:0032501 GO:0032502 GO:0032504 GO:0034059 GO:0034284 GO:0034285 GO:0035251 GO:0036293 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0046686 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051259 GO:0051262 GO:0055044 GO:0061458 GO:0065003 GO:0070482 GO:0071695 GO:0071840 GO:0071944 GO:0072347 GO:0072708 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

789

Amino Acids

90.13

Weight (kDa)

5.44

Isoelectric Point (pI)

38.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SUS_N	PF24861	11 - 111	5.1e-29	Sucrose synthase N-terminal
SUS_EPBD	PF24862	146 - 234	4.2e-29	Sucrose synthase EPBD domain
GT-B_Sucrose_synth	PF00862	257 - 537	2.7e-158	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	551 - 706	1.6e-25	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	555 - 707	7e-11	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001556)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43190 AT3G43190 AT5G20830 AT5G20830 AT5G20830
fragaria_vesca	FvH4_1g07260 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360
malus_domestica	MD02G1100500.v1.1 MD02G1100600.v1.1 MD15G1223500.v1.1
prunus_persica	Prupe.2G242300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1
pyrus_communis	pycom02g07890 pycom15g19770
rosa_chinensis	RchiOBHm_Chr2g0093161 RchiOBHm_Chr2g0095901
rosa_laevigata	RLG00000016373 RLG00000016605
rosa_multiflora	Rmu_sc0003724.1_g000005 Rmu_sc0014241.1_g000002 Rmu_sc0038852.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145980 Rroxscaffold_2G00148460
rosa_rugosa	Rorug02G0033300 Rorug02G0053600 Rorug02G0053600 Rorug02G0053700 Rorug02G0053800
rosa_samantha	Rh2AG079000 Rh2AG102900 Rh2BG080300 Rh2BG104300 Rh2CG082500 Rh2CG106800 Rh2DG078000 Rh2DG104500
rosa_wichuraiana	Rw2G006750 Rw2G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1966
AccB1I	GGYRCC	1 cut(s)	754
AccB7I	CCANNNNNTGG	1 cut(s)	2093
AccI	GTMKAC	1 cut(s)	2204
AccII	CGCG	2 cut(s)	1473, 1899
AciI	CCGC	7 cut(s)	457, 523, 1017, 1471, 1897, 1921, 2037
AcoI	YGGCCR	3 cut(s)	3, 877, 1127
AcsI	RAATTY	2 cut(s)	779, 1229
AcuI	CTGAAG	2 cut(s)	186, 384
AfaI	GTAC	7 cut(s)	449, 1280, 1298, 1322, 1390, 1553, 1835
AfiI	CCNNNNNNNGG	6 cut(s)	248, 255, 751, 872, 1746, 2093
AflII	CTTAAG	1 cut(s)	929
AflIII	ACRYGT	1 cut(s)	592
AjnI	CCWGG	4 cut(s)	879, 1158, 1459, 1522
AleI	CACNNNNGTG	1 cut(s)	1638
Alw21I	GWGCWC	5 cut(s)	25, 1250, 1605, 1842, 1917
Alw26I	GTCTC	3 cut(s)	828, 1133, 1430
Alw44I	GTGCAC	1 cut(s)	1246
AlwNI	CAGNNNCTG	2 cut(s)	62, 1529
Ama87I	CYCGRG	2 cut(s)	287, 512
AoxI	GGCC	8 cut(s)	3, 245, 877, 1127, 1209, 1462, 1995, 2038
ApaLI	GTGCAC	1 cut(s)	1246
ApeKI	GCWGC	4 cut(s)	30, 203, 2105, 2230
ApoI	RAATTY	2 cut(s)	779, 1229
AspS9I	GGNCC	3 cut(s)	246, 742, 2039
AsuC2I	CCSGG	3 cut(s)	249, 1711, 2042
AsuHPI	GGTGA	5 cut(s)	59, 952, 1699, 1922, 2108
AvaI	CYCGRG	2 cut(s)	287, 512
AvaII	GGWCC	1 cut(s)	742
BaeGI	GKGCMC	1 cut(s)	1250
BalI	TGGCCA	2 cut(s)	879, 1129
BanI	GGYRCC	1 cut(s)	754
BanII	GRGCYC	3 cut(s)	1605, 1842, 1917
BarI	GAAGNNNNNNTAC	6 cut(s)	1262, 1294, 1817, 1849, 2279, 2311
BbsI	GAAGAC	2 cut(s)	287, 1277
Bbv12I	GWGCWC	5 cut(s)	25, 1250, 1605, 1842, 1917
BbvI	GCAGC	4 cut(s)	42, 190, 2092, 2217
BccI	CCATC	5 cut(s)	338, 1098, 1190, 1673, 1869
BceAI	ACGGC	1 cut(s)	556
BcgI	CGANNNNNNTGC	4 cut(s)	332, 366, 478, 512
BciT130I	CCWGG	4 cut(s)	881, 1160, 1461, 1524
BclI	TGATCA	1 cut(s)	816
BcnI	CCSGG	3 cut(s)	249, 1711, 2042
BcoDI	GTCTC	3 cut(s)	828, 1133, 1430
BfaI	CTAG	3 cut(s)	224, 629, 1136
BfmI	CTRYAG	2 cut(s)	1189, 1609
BfrI	CTTAAG	1 cut(s)	929
BfuAI	ACCTGC	1 cut(s)	1966
BglII	AGATCT	3 cut(s)	78, 673, 2166
BisI	GCNGC	5 cut(s)	31, 204, 2038, 2106, 2231
BlsI	GCNGC	5 cut(s)	32, 205, 2039, 2107, 2232
Bme1390I	CCNGG	7 cut(s)	249, 881, 1160, 1461, 1524, 1711, 2042
Bme18I	GGWCC	1 cut(s)	742
BmeT110I	CYCGRG	2 cut(s)	287, 512
BmgT120I	GGNCC	3 cut(s)	246, 742, 2039
BmiI	GGNNCC	2 cut(s)	756, 989
BmrFI	CCNGG	7 cut(s)	249, 881, 1160, 1461, 1524, 1711, 2042
BmrI	ACTGGG	1 cut(s)	2167
BmsI	GCATC	6 cut(s)	42, 508, 543, 751, 915, 988
BmuI	ACTGGG	1 cut(s)	2167
BpiI	GAAGAC	2 cut(s)	287, 1277
BpmI	CTGGAG	1 cut(s)	392
Bpu10I	CCTNAGC	1 cut(s)	1745
BpuEI	CTTGAG	4 cut(s)	794, 1049, 1096, 1331
BpuMI	CCSGG	3 cut(s)	249, 1711, 2042
BsaBI	GATNNNNATC	1 cut(s)	2088
BsaJI	CCNNGG	9 cut(s)	242, 634, 798, 829, 1159, 1263, 1522, 1797, 2173
BsaWI	WCCGGW	2 cut(s)	2243, 2319
BsaXI	ACNNNNNCTCC	4 cut(s)	1935, 1965, 2153, 2183
Bsc4I	CCNNNNNNNGG	6 cut(s)	248, 255, 751, 872, 1746, 2093
Bse1I	ACTGG	6 cut(s)	56, 503, 877, 1304, 1336, 2162
Bse3DI	GCAATG	4 cut(s)	25, 1251, 1353, 1443
Bse8I	GATNNNNATC	1 cut(s)	2088
BseBI	CCWGG	4 cut(s)	881, 1160, 1461, 1524
BseDI	CCNNGG	9 cut(s)	242, 634, 798, 829, 1159, 1263, 1522, 1797, 2173
BseGI	GGATG	3 cut(s)	264, 499, 580
BseJI	GATNNNNATC	1 cut(s)	2088
BseLI	CCNNNNNNNGG	6 cut(s)	248, 255, 751, 872, 1746, 2093
BseMI	GCAATG	4 cut(s)	25, 1251, 1353, 1443
BseNI	ACTGG	6 cut(s)	56, 503, 877, 1304, 1336, 2162
BseRI	GAGGAG	3 cut(s)	311, 1166, 1823
BseSI	GKGCMC	1 cut(s)	1250
BseXI	GCAGC	4 cut(s)	42, 190, 2092, 2217
BseYI	CCCAGC	2 cut(s)	132, 1775
Bsh1236I	CGCG	2 cut(s)	1473, 1899
BshFI	GGCC	8 cut(s)	5, 247, 879, 1129, 1211, 1464, 1997, 2040
BshNI	GGYRCC	1 cut(s)	754
BsiHKAI	GWGCWC	5 cut(s)	25, 1250, 1605, 1842, 1917
BsiHKCI	CYCGRG	2 cut(s)	287, 512
BsiSI	CCGG	7 cut(s)	249, 730, 1710, 2042, 2070, 2244, 2320
BslFI	GGGAC	2 cut(s)	1021, 2174
BslI	CCNNNNNNNGG	6 cut(s)	248, 255, 751, 872, 1746, 2093
BsmAI	GTCTC	3 cut(s)	828, 1133, 1430
BsmFI	GGGAC	2 cut(s)	1021, 2174
BsmI	GAATGC	2 cut(s)	969, 1741
BsnI	GGCC	8 cut(s)	5, 247, 879, 1129, 1211, 1464, 1997, 2040
BsoBI	CYCGRG	2 cut(s)	287, 512
Bsp1286I	GDGCHC	5 cut(s)	25, 1250, 1605, 1842, 1917
Bsp19I	CCATGG	1 cut(s)	829
BspACI	CCGC	7 cut(s)	457, 523, 1017, 1471, 1897, 1921, 2037
BspANI	GGCC	8 cut(s)	5, 247, 879, 1129, 1211, 1464, 1997, 2040
BspFNI	CGCG	2 cut(s)	1473, 1899
BspLI	GGNNCC	2 cut(s)	756, 989
BspMI	ACCTGC	1 cut(s)	1966
BspQI	GCTCTTC	4 cut(s)	240, 482, 485, 1593
BspT107I	GGYRCC	1 cut(s)	754
BspTI	CTTAAG	1 cut(s)	929
BsrDI	GCAATG	4 cut(s)	25, 1251, 1353, 1443
BsrI	ACTGG	6 cut(s)	56, 503, 877, 1304, 1336, 2162
BssECI	CCNNGG	9 cut(s)	242, 634, 798, 829, 1159, 1263, 1522, 1797, 2173
BssNAI	GTATAC	1 cut(s)	2205
BssT1I	CCWWGG	6 cut(s)	242, 798, 829, 1263, 1797, 2173
Bst1107I	GTATAC	1 cut(s)	2205
Bst2UI	CCWGG	4 cut(s)	881, 1160, 1461, 1524
Bst4CI	ACNGT	8 cut(s)	71, 1193, 1423, 1572, 1694, 1869, 1910, 1987
Bst6I	CTCTTC	7 cut(s)	240, 482, 485, 628, 1593, 2190, 2355
BstAFI	CTTAAG	1 cut(s)	929
BstAPI	GCANNNNNTGC	2 cut(s)	667, 761
BstC8I	GCNNGC	5 cut(s)	361, 497, 766, 909, 1166
BstDSI	CCRYGG	1 cut(s)	829
BstF5I	GGATG	3 cut(s)	264, 499, 580
BstFNI	CGCG	2 cut(s)	1473, 1899
BstMAI	GTCTC	3 cut(s)	828, 1133, 1430
BstMWI	GCNNNNNNNGC	7 cut(s)	97, 133, 667, 761, 1470, 2037, 2070
BstNI	CCWGG	4 cut(s)	881, 1160, 1461, 1524
BstNSI	RCATGY	3 cut(s)	499, 596, 2270
BstSCI	CCNGG	7 cut(s)	247, 879, 1158, 1459, 1522, 1709, 2040
BstSFI	CTRYAG	2 cut(s)	1189, 1609
BstSLI	GKGCMC	1 cut(s)	1250
BstUI	CGCG	2 cut(s)	1473, 1899
BstV1I	GCAGC	4 cut(s)	42, 190, 2092, 2217
BstV2I	GAAGAC	2 cut(s)	287, 1277
BstX2I	RGATCY	6 cut(s)	78, 673, 792, 1107, 2112, 2166
BstYI	RGATCY	6 cut(s)	78, 673, 792, 1107, 2112, 2166
BstZ17I	GTATAC	1 cut(s)	2205
BsuRI	GGCC	8 cut(s)	5, 247, 879, 1129, 1211, 1464, 1997, 2040
BtgI	CCRYGG	1 cut(s)	829
BtsCI	GGATG	3 cut(s)	264, 499, 580
BtsIMutI	CAGTG	9 cut(s)	480, 510, 870, 1146, 1198, 1250, 1419, 1554, 2155
BveI	ACCTGC	1 cut(s)	1966
Cac8I	GCNNGC	5 cut(s)	361, 497, 766, 909, 1166
CaiI	CAGNNNCTG	2 cut(s)	62, 1529
Cfr13I	GGNCC	3 cut(s)	246, 742, 2039
CseI	GACGC	2 cut(s)	1013, 2279
Csp6I	GTAC	7 cut(s)	448, 1279, 1297, 1321, 1389, 1552, 1834
CspCI	CAANNNNNGTGG	2 cut(s)	1313, 1348
CviQI	GTAC	7 cut(s)	448, 1279, 1297, 1321, 1389, 1552, 1834
EaeI	YGGCCR	3 cut(s)	3, 877, 1127
Eam1104I	CTCTTC	7 cut(s)	240, 482, 485, 628, 1593, 2190, 2355
EarI	CTCTTC	7 cut(s)	240, 482, 485, 628, 1593, 2190, 2355
EciI	GGCGGA	1 cut(s)	512
Ecl136II	GAGCTC	3 cut(s)	1603, 1840, 1915
Eco130I	CCWWGG	6 cut(s)	242, 798, 829, 1263, 1797, 2173
Eco24I	GRGCYC	3 cut(s)	1605, 1842, 1917
Eco32I	GATATC	2 cut(s)	863, 958
Eco47I	GGWCC	1 cut(s)	742
Eco53kI	GAGCTC	3 cut(s)	1603, 1840, 1915
Eco57I	CTGAAG	2 cut(s)	186, 384
Eco88I	CYCGRG	2 cut(s)	287, 512
EcoICRI	GAGCTC	3 cut(s)	1603, 1840, 1915
EcoRII	CCWGG	4 cut(s)	879, 1158, 1459, 1522
EcoRV	GATATC	2 cut(s)	863, 958
EcoT14I	CCWWGG	6 cut(s)	242, 798, 829, 1263, 1797, 2173
EcoT22I	ATGCAT	1 cut(s)	501
EcoT38I	GRGCYC	3 cut(s)	1605, 1842, 1917
ErhI	CCWWGG	6 cut(s)	242, 798, 829, 1263, 1797, 2173
FalI	AAGNNNNNCTT	4 cut(s)	782, 814, 1310, 1342
FaqI	GGGAC	2 cut(s)	1021, 2174
FbaI	TGATCA	1 cut(s)	816
FblI	GTMKAC	1 cut(s)	2204
Fnu4HI	GCNGC	5 cut(s)	31, 204, 2038, 2106, 2231
FokI	GGATG	3 cut(s)	251, 486, 587
FriOI	GRGCYC	3 cut(s)	1605, 1842, 1917
Fsp4HI	GCNGC	5 cut(s)	31, 204, 2038, 2106, 2231
FspBI	CTAG	3 cut(s)	224, 629, 1136
GluI	GCNGC	5 cut(s)	31, 204, 2038, 2106, 2231
GsaI	CCCAGC	2 cut(s)	136, 1779
GsuI	CTGGAG	1 cut(s)	392
HaeIII	GGCC	8 cut(s)	5, 247, 879, 1129, 1211, 1464, 1997, 2040
HapII	CCGG	7 cut(s)	249, 730, 1710, 2042, 2070, 2244, 2320
HgaI	GACGC	2 cut(s)	1013, 2279
HincII	GTYRAC	3 cut(s)	1575, 1759, 2122
HindII	GTYRAC	3 cut(s)	1575, 1759, 2122
HindIII	AAGCTT	2 cut(s)	651, 1742
HinfI	GANTC	6 cut(s)	59, 270, 1286, 1438, 1793, 2339
HpaI	GTTAAC	1 cut(s)	1759
HpaII	CCGG	7 cut(s)	249, 730, 1710, 2042, 2070, 2244, 2320
HphI	GGTGA	5 cut(s)	59, 952, 1699, 1922, 2108
Hpy166II	GTNNAC	7 cut(s)	1248, 1341, 1554, 1575, 1759, 2122, 2205
Hpy8I	GTNNAC	7 cut(s)	1248, 1341, 1554, 1575, 1759, 2122, 2205
Hpy99I	CGWCG	3 cut(s)	344, 1184, 2295
HpyCH4III	ACNGT	8 cut(s)	71, 1193, 1423, 1572, 1694, 1869, 1910, 1987
HpyF10VI	GCNNNNNNNGC	7 cut(s)	97, 133, 667, 761, 1470, 2037, 2070
Ksp22I	TGATCA	1 cut(s)	816
KspAI	GTTAAC	1 cut(s)	1759
LguI	GCTCTTC	4 cut(s)	240, 482, 485, 1593
LmnI	GCTCC	3 cut(s)	993, 1526, 1943
Lsp1109I	GCAGC	4 cut(s)	42, 190, 2092, 2217
LweI	GCATC	6 cut(s)	42, 508, 543, 751, 915, 988
MaeI	CTAG	3 cut(s)	224, 629, 1136
MaeIII	GTNAC	3 cut(s)	979, 1237, 2096
MflI	RGATCY	6 cut(s)	78, 673, 792, 1107, 2112, 2166
MhlI	GDGCHC	5 cut(s)	25, 1250, 1605, 1842, 1917
MlsI	TGGCCA	2 cut(s)	879, 1129
MluCI	AATT	4 cut(s)	779, 1092, 1229, 1372
MluNI	TGGCCA	2 cut(s)	879, 1129
MlyI	GAGTC	4 cut(s)	68, 1432, 1802, 2348
MmeI	TCCRAC	3 cut(s)	357, 613, 1162
Mox20I	TGGCCA	2 cut(s)	879, 1129
Mph1103I	ATGCAT	1 cut(s)	501
MscI	TGGCCA	2 cut(s)	879, 1129
MseI	TTAA	3 cut(s)	807, 930, 1758
MslI	CAYNNNNRTG	6 cut(s)	72, 534, 605, 1358, 1638, 2303
Msp20I	TGGCCA	2 cut(s)	879, 1129
MspA1I	CMGCKG	1 cut(s)	1346
MspCI	CTTAAG	1 cut(s)	929
MspI	CCGG	7 cut(s)	249, 730, 1710, 2042, 2070, 2244, 2320
MspR9I	CCNGG	7 cut(s)	249, 881, 1160, 1461, 1524, 1711, 2042
Mva1269I	GAATGC	2 cut(s)	969, 1741
MvaI	CCWGG	4 cut(s)	881, 1160, 1461, 1524
MvnI	CGCG	2 cut(s)	1473, 1899
MwoI	GCNNNNNNNGC	7 cut(s)	97, 133, 667, 761, 1470, 2037, 2070
NciI	CCSGG	3 cut(s)	249, 1711, 2042
NcoI	CCATGG	1 cut(s)	829
NlaIV	GGNNCC	2 cut(s)	756, 989
NmuCI	GTSAC	1 cut(s)	2096
NsiI	ATGCAT	1 cut(s)	501
NspI	RCATGY	3 cut(s)	499, 596, 2270
OliI	CACNNNNGTG	1 cut(s)	1638
PaeI	GCATGC	1 cut(s)	499
PaeR7I	CTCGAG	2 cut(s)	287, 512
PciI	ACATGT	1 cut(s)	592
PciSI	GCTCTTC	4 cut(s)	240, 482, 485, 1593
PctI	GAATGC	2 cut(s)	969, 1741
PfeI	GAWTC	2 cut(s)	270, 1286
PflFI	GACNNNGTC	2 cut(s)	58, 851
PflMI	CCANNNNNTGG	1 cut(s)	2093
PkrI	GCNGC	5 cut(s)	32, 205, 2039, 2107, 2232
PleI	GAGTC	4 cut(s)	67, 1432, 1801, 2347
PpsI	GAGTC	4 cut(s)	67, 1432, 1801, 2347
PscI	ACATGT	1 cut(s)	592
Psp124BI	GAGCTC	3 cut(s)	1605, 1842, 1917
Psp6I	CCWGG	4 cut(s)	879, 1158, 1459, 1522
PspFI	CCCAGC	2 cut(s)	132, 1775
PspGI	CCWGG	4 cut(s)	879, 1158, 1459, 1522
PspN4I	GGNNCC	2 cut(s)	756, 989
PspPI	GGNCC	3 cut(s)	246, 742, 2039
PspXI	VCTCGAGB	2 cut(s)	287, 512
PstNI	CAGNNNCTG	2 cut(s)	62, 1529
PsuI	RGATCY	6 cut(s)	78, 673, 792, 1107, 2112, 2166
PsyI	GACNNNGTC	2 cut(s)	58, 851
PvuII	CAGCTG	1 cut(s)	1346
RsaI	GTAC	7 cut(s)	449, 1280, 1298, 1322, 1390, 1553, 1835
RsaNI	GTAC	7 cut(s)	448, 1279, 1297, 1321, 1389, 1552, 1834
RseI	CAYNNNNRTG	6 cut(s)	72, 534, 605, 1358, 1638, 2303
SacI	GAGCTC	3 cut(s)	1605, 1842, 1917
SapI	GCTCTTC	4 cut(s)	240, 482, 485, 1593
SaqAI	TTAA	3 cut(s)	807, 930, 1758
SatI	GCNGC	5 cut(s)	31, 204, 2038, 2106, 2231
Sau96I	GGNCC	3 cut(s)	246, 742, 2039
SchI	GAGTC	4 cut(s)	68, 1432, 1802, 2348
ScrFI	CCNGG	7 cut(s)	249, 881, 1160, 1461, 1524, 1711, 2042
SduI	GDGCHC	5 cut(s)	25, 1250, 1605, 1842, 1917
SfaNI	GCATC	6 cut(s)	42, 508, 543, 751, 915, 988
SfcI	CTRYAG	2 cut(s)	1189, 1609
Sfr274I	CTCGAG	2 cut(s)	287, 512
SinI	GGWCC	1 cut(s)	742
SlaI	CTCGAG	2 cut(s)	287, 512
SmiMI	CAYNNNNRTG	6 cut(s)	72, 534, 605, 1358, 1638, 2303
SmlI	CTYRAG	7 cut(s)	287, 512, 773, 929, 1028, 1111, 1310
SmoI	CTYRAG	7 cut(s)	287, 512, 773, 929, 1028, 1111, 1310
SphI	GCATGC	1 cut(s)	499
Sse9I	AATT	4 cut(s)	779, 1092, 1229, 1372
SsiI	CCGC	7 cut(s)	457, 523, 1017, 1471, 1897, 1921, 2037
SspI	AATATT	1 cut(s)	1052
SspMI	CTAG	3 cut(s)	224, 629, 1136
SstI	GAGCTC	3 cut(s)	1605, 1842, 1917
StyD4I	CCNGG	7 cut(s)	247, 879, 1158, 1459, 1522, 1709, 2040
StyI	CCWWGG	6 cut(s)	242, 798, 829, 1263, 1797, 2173
TaaI	ACNGT	8 cut(s)	71, 1193, 1423, 1572, 1694, 1869, 1910, 1987
TaqI	TCGA	7 cut(s)	95, 102, 288, 342, 513, 1497, 1596
TasI	AATT	4 cut(s)	779, 1092, 1229, 1372
TatI	WGTACW	1 cut(s)	1296
TauI	GCSGC	1 cut(s)	2040
TfiI	GAWTC	2 cut(s)	270, 1286
Tru1I	TTAA	3 cut(s)	807, 930, 1758
Tru9I	TTAA	3 cut(s)	807, 930, 1758
TscAI	CASTG	9 cut(s)	487, 510, 877, 1153, 1198, 1250, 1426, 1561, 2162
TseFI	GTSAC	1 cut(s)	2096
TseI	GCWGC	4 cut(s)	30, 203, 2105, 2230
Tsp45I	GTSAC	1 cut(s)	2096
TspGWI	ACGGA	3 cut(s)	633, 1055, 1088
TspRI	CASTG	9 cut(s)	487, 510, 877, 1153, 1198, 1250, 1426, 1561, 2162
Tth111I	GACNNNGTC	2 cut(s)	58, 851
Van91I	CCANNNNNTGG	1 cut(s)	2093
Vha464I	CTTAAG	1 cut(s)	929
VneI	GTGCAC	1 cut(s)	1246
VpaK11BI	GGWCC	1 cut(s)	742
XapI	RAATTY	2 cut(s)	779, 1229
XbaI	TCTAGA	1 cut(s)	1135
XceI	RCATGY	3 cut(s)	499, 596, 2270
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1403
XhoI	CTCGAG	2 cut(s)	287, 512
XmiI	GTMKAC	1 cut(s)	2204
XspI	CTAG	3 cut(s)	224, 629, 1136
Zsp2I	ATGCAT	1 cut(s)	501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.