Rorug02G0053700

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
4116973 .. 4118935
1963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0053700.1

Sequence Viewer

Length: 405 bp
ATGGGGAAGCTTAGTTTTGGAAGGGTGCTAGGCTCTCTTTGTCTTTCTTCTGGATCAAGTTCTTGTTTCTGCATGAACTACTCCGAGGAAAACCAAGACGAGTTTGAGAAAAATCCATTGATTCCTGGTGAAAAGGATCAGTTTATGAGACTCAAGGATGTTGTTGCCGGTAAACAAACACTGGCATTTCAACTGAAACCCAAGATGGTAATGTTAAGGGTCTCCATGCACTGCAATGGATGTGCCAGGAAAGTTGAAAAACATATCTCGAAGATGGAAGGGGTGACTTCGTACAAAGTAGACCTGGAAAGCAAGATGGTGGTTGTGATCGGAGATGTTCTGCCTTGTGAGGTGGTGCAGAGTGTGTCCAAGGTAAAAAATGCCGAGATTTGGAACTCGCCGTGA

Protein Analysis

134

Amino Acids

14.9

Weight (kDa)

8.53

Isoelectric Point (pI)

43.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HMA PF00403 73 - 124 3.2e-13 Heavy-metal-associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 300
AclWI GGATC 2 cut(s) 61, 144
AfaI GTAC 1 cut(s) 293
AfiI CCNNNNNNNGG 1 cut(s) 390
AgsI TTSAA 2 cut(s) 191, 257
AjnI CCWGG 3 cut(s) 124, 245, 303
AluBI AGCT 1 cut(s) 10
AluI AGCT 1 cut(s) 10
Alw26I GTCTC 2 cut(s) 142, 226
AlwI GGATC 2 cut(s) 61, 144
AsuHPI GGTGA 2 cut(s) 140, 295
BccI CCATC 3 cut(s) 199, 268, 310
BceAI ACGGC 1 cut(s) 385
BciT130I CCWGG 3 cut(s) 126, 247, 305
BcoDI GTCTC 2 cut(s) 142, 226
BfaI CTAG 1 cut(s) 29
Bme1390I CCNGG 3 cut(s) 126, 247, 305
BmrFI CCNGG 3 cut(s) 126, 247, 305
BpuEI CTTGAG 1 cut(s) 137
BsaI GGTCTC 1 cut(s) 226
BsaJI CCNNGG 2 cut(s) 84, 369
Bsc4I CCNNNNNNNGG 1 cut(s) 390
Bse118I RCCGGY 1 cut(s) 167
Bse1I ACTGG 1 cut(s) 186
Bse3DI GCAATG 1 cut(s) 241
BseBI CCWGG 3 cut(s) 126, 247, 305
BseDI CCNNGG 2 cut(s) 84, 369
BseGI GGATG 2 cut(s) 163, 245
BseLI CCNNNNNNNGG 1 cut(s) 390
BseMI GCAATG 1 cut(s) 241
BseNI ACTGG 1 cut(s) 186
BsgI GTGCAG 1 cut(s) 377
BsiSI CCGG 1 cut(s) 168
BslI CCNNNNNNNGG 1 cut(s) 390
BsmAI GTCTC 2 cut(s) 142, 226
Bso31I GGTCTC 1 cut(s) 226
Bsp143I GATC 3 cut(s) 53, 136, 327
BspPI GGATC 2 cut(s) 61, 144
BspTNI GGTCTC 1 cut(s) 226
BsrDI GCAATG 1 cut(s) 241
BsrFI RCCGGY 1 cut(s) 167
BsrI ACTGG 1 cut(s) 186
BssAI RCCGGY 1 cut(s) 167
BssECI CCNNGG 2 cut(s) 84, 369
BssMI GATC 3 cut(s) 53, 136, 327
BssT1I CCWWGG 1 cut(s) 369
Bst2UI CCWGG 3 cut(s) 126, 247, 305
BstDEI CTNAG 1 cut(s) 11
BstF5I GGATG 2 cut(s) 163, 245
BstKTI GATC 3 cut(s) 56, 139, 330
BstMAI GTCTC 2 cut(s) 142, 226
BstMBI GATC 3 cut(s) 53, 136, 327
BstNI CCWGG 3 cut(s) 126, 247, 305
BstSCI CCNGG 3 cut(s) 124, 245, 303
BtsCI GGATG 2 cut(s) 163, 245
BtsI GCAGTG 1 cut(s) 229
BtsIMutI CAGTG 2 cut(s) 179, 229
Cfr10I RCCGGY 1 cut(s) 167
Csp6I GTAC 1 cut(s) 292
CviAII CATG 2 cut(s) 73, 226
CviJI RGCY 2 cut(s) 10, 33
CviKI_1 RGCY 2 cut(s) 10, 33
CviQI GTAC 1 cut(s) 292
DdeI CTNAG 1 cut(s) 11
DpnI GATC 3 cut(s) 55, 138, 329
DpnII GATC 3 cut(s) 53, 136, 327
Eco130I CCWWGG 1 cut(s) 369
Eco31I GGTCTC 1 cut(s) 226
EcoRII CCWGG 3 cut(s) 124, 245, 303
EcoT14I CCWWGG 1 cut(s) 369
ErhI CCWWGG 1 cut(s) 369
FaeI CATG 2 cut(s) 76, 229
FaiI YATR 4 cut(s) 74, 146, 227, 264
FatI CATG 2 cut(s) 72, 225
FblI GTMKAC 1 cut(s) 300
FokI GGATG 2 cut(s) 170, 252
FspBI CTAG 1 cut(s) 29
HapII CCGG 1 cut(s) 168
Hin1II CATG 2 cut(s) 76, 229
HindIII AAGCTT 1 cut(s) 8
HinfI GANTC 2 cut(s) 121, 150
HpaII CCGG 1 cut(s) 168
HphI GGTGA 2 cut(s) 140, 295
Hpy166II GTNNAC 2 cut(s) 173, 301
Hpy188I TCNGA 2 cut(s) 85, 332
Hpy188III TCNNGA 2 cut(s) 51, 268
Hpy8I GTNNAC 2 cut(s) 173, 301
HpyAV CCTTC 2 cut(s) 15, 272
HpyCH4V TGCA 4 cut(s) 72, 229, 234, 358
HpyF3I CTNAG 1 cut(s) 11
Hsp92II CATG 2 cut(s) 76, 229
Kzo9I GATC 3 cut(s) 53, 136, 327
LpnPI CCDG 9 cut(s) 36, 111, 138, 167, 181, 232, 259, 290, 317
MaeI CTAG 1 cut(s) 29
MaeIII GTNAC 1 cut(s) 283
MalI GATC 3 cut(s) 55, 138, 329
MboI GATC 3 cut(s) 53, 136, 327
MboII GAAGA 2 cut(s) 39, 283
MlyI GAGTC 1 cut(s) 144
MnlI CCTC 2 cut(s) 79, 343
MseI TTAA 1 cut(s) 215
MslI CAYNNNNRTG 1 cut(s) 234
MspI CCGG 1 cut(s) 168
MspR9I CCNGG 3 cut(s) 126, 247, 305
MvaI CCWGG 3 cut(s) 126, 247, 305
NdeII GATC 3 cut(s) 53, 136, 327
NlaIII CATG 2 cut(s) 76, 229
NmuCI GTSAC 1 cut(s) 283
PfeI GAWTC 1 cut(s) 121
PleI GAGTC 1 cut(s) 144
PpsI GAGTC 1 cut(s) 144
Psp6I CCWGG 3 cut(s) 124, 245, 303
PspGI CCWGG 3 cut(s) 124, 245, 303
RsaI GTAC 1 cut(s) 293
RsaNI GTAC 1 cut(s) 292
RseI CAYNNNNRTG 1 cut(s) 234
SaqAI TTAA 1 cut(s) 215
Sau3AI GATC 3 cut(s) 53, 136, 327
SchI GAGTC 1 cut(s) 144
ScrFI CCNGG 3 cut(s) 126, 247, 305
SetI ASST 4 cut(s) 12, 306, 354, 375
SmiMI CAYNNNNRTG 1 cut(s) 234
SmlI CTYRAG 1 cut(s) 152
SmoI CTYRAG 1 cut(s) 152
SspMI CTAG 1 cut(s) 29
StyD4I CCNGG 3 cut(s) 124, 245, 303
StyI CCWWGG 1 cut(s) 369
TaqI TCGA 1 cut(s) 269
TfiI GAWTC 1 cut(s) 121
Tru1I TTAA 1 cut(s) 215
Tru9I TTAA 1 cut(s) 215
TscAI CASTG 2 cut(s) 186, 236
TseFI GTSAC 1 cut(s) 283
Tsp45I GTSAC 1 cut(s) 283
TspDTI ATGAA 1 cut(s) 89
TspRI CASTG 2 cut(s) 186, 236
XmiI GTMKAC 1 cut(s) 300
XspI CTAG 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.