Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001556

Physical Location & Seq

Genomic Coordinates Reverse (-)

4102396 .. 4109370

Gene Structure 6975 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0053600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGCGAGCCGAGTGAAGGAGGACGAGAAAAATGAACGGATTATTCGAGGCCTTCTTAAACTTCCTGAGAATCGCAGATGCATTAACTGCAATAGTCTGGGACCGCAGTATGTTTGCACTAATTTCTGGACATTTGTTTGCACCAACTGCAGTGGAATACATCGGGAGTTCACGCACCGAGTAAAATCAGTGTCAATGGCCAAGTTTACGTCGCAAGAAGTTAAATCCCTTCAAGAAGGGGGAAACCAGCGTGCAAAGGAACTTTATCAAAAAGAATTAGATCCACAACGTAATTCCTTCCCTGATAGCAGTAATGTTGAGAGACTTCGAGACTTTATTAAGCATGTGTACGTGGATAGAAGATATACTGGTGAAAGAAACTCGGACAAGCCTCCGAGGGTGAAAATGGGTGACAAGGAGGATTCTTATGAAAATAGAAGGCTAGATTCATATCAGGGCTCTCGAAGCCCACCATATGATGATGAACGTCGTTATAGTGGAAGGTCCAGTCCCGGTGGTAGAAGTTATGAGGAGCAAAGAAGTCCTGGATATGATCTAGAAAGTCGACAGTATGGTGATTCTAAGAGAAGTCCTTCTCGCCCTGAAATTGTCAATGATTGGCGTCGAGAAGATAGATTTGGAAATGGTAGGAGATATGATGATCGTAGAGTATCCGATGGAGATTCTAAACTGGACGCAAAATCTCCTGAACGACCAAGAGATATAGATTCGTCCAGTCCCCCTATGGTACGACCTGTTAGAGATATTTTGGGGGATAAGACAATACCTCTCCGTATTATTGAGCCTCCTAAAGCCAACAATGTTAGGCCTACTGATGGTTCCGTTCTTACACAGAGAACTGCTTCTTCCAGCAGCTTGGGTTCCACCAATGGGAACCCAGTTGAAGTGAAAGTGGAGACATCTGGAAGTTTAATTGATTTTGATGCCGATATTGAACCTGCTCCAACTTTAGCAGTTCCTCAAGCACAACAAACTTCTGTAACTCAATCATATTCACAGCCAGAACATTCACACAGTGACAACAACTGGGCCTCTTTTGATGTTGCTCCACAAGTGAAAGTATCTCAAGCTCCTGCAAATGCAAATTCTTTGGAATCTCTGCTATCAGAGTTGTCTGTTTCAGCACCTGTCCCTAGTTATTCTGGAACTGCAGATAATACCGGGGCTTTTACAGCTGCAGGTAACATGACTGCACCATTCAGTGGTAATCCAGTCATCACTCCTGTAGGACACACAATGTTGCCGACTGCTTCTCATACAGTTGCACCGATTACGAGCTTGTCAACATTTCCCCCTGTTGGTGCTCCAGTTGCAACCCCTGGATTGGCTCAAACATTCCCTGCCAATGCTAGTAATTTTCCTGCTACCGGTTCTGGGCAATGGCCTAGTATGCAGCATCAGCAACCTTCTTTATTCCCTGCTAATGGTATTCAGTCTGCCTCTCAACAATACATACCATCAGTTGGTGGAGCTTCAAGCAATCAACCATGGAATTTAGCACATGTCCCAAATGCACAAGGTCAACCTAGCTATCCAGCTGCACAAGCACCACAAGATGTTTCAAGATCTACCAACAATGTTAGTACTGTTGCATCACAAAATTCGGCTGGGGATGTAAAATCAATTGGAAGAAGTGCACTTCCTGAGGATCTTTTTGCGATGAACTATTCATCCTTCCCTGCACCAGTTCCTGGATGGCAAACTGGTCCTCCTCAGGGTATGGGGTTTGCTATGCCATACAACACTGCAGTGCCCATGCCCAGTTTTCAGCAGTCGTTAAAGTCAGCAAACCCGTTTGATGTCAGTAGTGGACCTCCTCCAGTTCAAGCCTCAGCGTTTCCTTCCATGGCATCCTCACAAGGACCGCTACCAAATATGCAGCCTCCATCTGGCTTATTGCGTACAGCTAGCCTTGGGACACCCTCATCAGCTTGGGGGCCCTCATATTCATCTGGATTGCCTCTCCAAGCACCACCATATGCATCACAAATGCCTCCAAGTGCCTACGTGGGGCAACAAATTCCGAGTAGCTTGCCACCTTCAGGGTATCAAGGAGCAGGGGGCTTTGGTGCTGAGGGGGCTGCTTTTGGTTCATTAAATATGGATCAACAGCCGGTTGGTAGATTCTCAGCACCTGCTACCCCAAATCCTTTCCCGTCTGCAGGAGGAAACCCATTTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0001666 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008194 GO:0009266 GO:0009409 GO:0009413 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010037 GO:0010038 GO:0010154 GO:0010431 GO:0010555 GO:0016020 GO:0016043 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0021700 GO:0022414 GO:0022607 GO:0030054 GO:0032501 GO:0032502 GO:0032504 GO:0034059 GO:0034284 GO:0034285 GO:0035251 GO:0036293 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0046686 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051259 GO:0051262 GO:0055044 GO:0061458 GO:0065003 GO:0070482 GO:0071695 GO:0071840 GO:0071944 GO:0072347 GO:0072708 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

734

Amino Acids

78.73

Weight (kDa)

7.12

Isoelectric Point (pI)

64.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArfGap	PF01412	13 - 123	4.6e-30	Putative GTPase activating protein for Arf

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001556)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43190 AT3G43190 AT5G20830 AT5G20830 AT5G20830
fragaria_vesca	FvH4_1g07260 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360
malus_domestica	MD02G1100500.v1.1 MD02G1100600.v1.1 MD15G1223500.v1.1
prunus_persica	Prupe.2G242300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1
pyrus_communis	pycom02g07890 pycom15g19770
rosa_chinensis	RchiOBHm_Chr2g0093161 RchiOBHm_Chr2g0095901
rosa_laevigata	RLG00000016373 RLG00000016605
rosa_multiflora	Rmu_sc0003724.1_g000005 Rmu_sc0014241.1_g000002 Rmu_sc0038852.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145980 Rroxscaffold_2G00148460
rosa_rugosa	Rorug02G0033300 Rorug02G0053600 Rorug02G0053600 Rorug02G0053700 Rorug02G0053800
rosa_samantha	Rh2AG079000 Rh2AG102900 Rh2BG080300 Rh2BG104300 Rh2CG082500 Rh2CG106800 Rh2DG078000 Rh2DG104500
rosa_wichuraiana	Rw2G006750 Rw2G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2164
Acc36I	ACCTGC	3 cut(s)	967, 1190, 2164
AccB7I	CCANNNNNTGG	3 cut(s)	1223, 1484, 1712
AccI	GTMKAC	1 cut(s)	565
AciI	CCGC	2 cut(s)	104, 1886
AclWI	GGATC	3 cut(s)	275, 1677, 2133
AcoI	YGGCCR	1 cut(s)	198
AcsI	RAATTY	4 cut(s)	1105, 1513, 1621, 2040
AcuI	CTGAAG	1 cut(s)	2046
AcyI	GRCGYC	1 cut(s)	622
AdeI	CACNNNGTG	1 cut(s)	1037
AfaI	GTAC	4 cut(s)	350, 750, 1606, 1924
AflIII	ACRYGT	1 cut(s)	1522
AgeI	ACCGGT	1 cut(s)	1388
AgsI	TTSAA	6 cut(s)	233, 905, 956, 1497, 1584, 1847
AjnI	CCWGG	3 cut(s)	544, 1339, 1711
AjuI	GAANNNNNNNTTGG	2 cut(s)	621, 653
AleI	CACNNNNGTG	1 cut(s)	1769
AloI	GAACNNNNNNTCC	2 cut(s)	1676, 1708
Alw21I	GWGCWC	2 cut(s)	1327, 1660
Alw26I	GTCTC	3 cut(s)	316, 324, 911
Alw44I	GTGCAC	1 cut(s)	1656
AlwI	GGATC	3 cut(s)	275, 1677, 2133
AlwNI	CAGNNNCTG	3 cut(s)	1148, 1712, 2156
AoxI	GGCC	6 cut(s)	49, 198, 827, 1050, 1403, 1958
ApaI	GGGCCC	1 cut(s)	1962
ApaLI	GTGCAC	1 cut(s)	1656
ApeKI	GCWGC	6 cut(s)	873, 1196, 1414, 1559, 1900, 2102
ApoI	RAATTY	4 cut(s)	1105, 1513, 1621, 2040
AsiGI	ACCGGT	1 cut(s)	1388
Asp700I	GAANNNNTTC	2 cut(s)	592, 862
AspS9I	GGNCC	8 cut(s)	101, 504, 1050, 1727, 1832, 1883, 1958, 1959
AsuC2I	CCSGG	2 cut(s)	513, 1183
AsuHPI	GGTGA	4 cut(s)	383, 412, 422, 587
AsuNHI	GCTAGC	1 cut(s)	1928
AvaII	GGWCC	5 cut(s)	101, 504, 1727, 1832, 1883
AxyI	CCTNAGG	2 cut(s)	1665, 1734
BaeGI	GKGCMC	3 cut(s)	1660, 1776, 1962
BalI	TGGCCA	1 cut(s)	200
BanII	GRGCYC	2 cut(s)	461, 1962
Bbv12I	GWGCWC	2 cut(s)	1327, 1660
BbvCI	CCTCAGC	2 cut(s)	1852, 2094
BbvI	GCAGC	6 cut(s)	885, 1183, 1426, 1546, 1912, 2089
BccI	CCATC	5 cut(s)	671, 830, 1486, 1710, 1915
BcgI	CGANNNNNNTGC	2 cut(s)	2035, 2069
BciT130I	CCWGG	3 cut(s)	546, 1341, 1713
BciVI	GTATCC	1 cut(s)	682
BcnI	CCSGG	2 cut(s)	513, 1183
BcoDI	GTCTC	3 cut(s)	316, 324, 911
BfaI	CTAG	7 cut(s)	443, 557, 1155, 1371, 1407, 1548, 1929
BfmI	CTRYAG	6 cut(s)	148, 1170, 1197, 1245, 1767, 2181
BfuAI	ACCTGC	3 cut(s)	967, 1190, 2164
BfuI	GTATCC	1 cut(s)	682
BglII	AGATCT	1 cut(s)	1586
BisI	GCNGC	6 cut(s)	874, 1197, 1415, 1560, 1901, 2103
BlsI	GCNGC	6 cut(s)	875, 1198, 1416, 1561, 1902, 2104
BmcAI	AGTACT	1 cut(s)	1606
Bme1390I	CCNGG	5 cut(s)	513, 546, 1183, 1341, 1713
Bme18I	GGWCC	5 cut(s)	101, 504, 1727, 1832, 1883
BmgT120I	GGNCC	8 cut(s)	101, 504, 1050, 1727, 1832, 1883, 1958, 1959
BmiI	GGNNCC	6 cut(s)	102, 841, 883, 896, 1959, 1960
BmrFI	CCNGG	5 cut(s)	513, 546, 1183, 1341, 1713
BmrI	ACTGGG	3 cut(s)	893, 1057, 1776
BmsI	GCATC	6 cut(s)	68, 934, 1426, 1622, 1880, 2012
BmtI	GCTAGC	1 cut(s)	1932
BmuI	ACTGGG	3 cut(s)	893, 1057, 1776
BpmI	CTGGAG	2 cut(s)	1311, 1824
Bpu10I	CCTNAGC	2 cut(s)	1852, 2094
BpuEI	CTTGAG	2 cut(s)	966, 1071
BpuMI	CCSGG	2 cut(s)	513, 1183
BsaAI	YACGTR	2 cut(s)	352, 2029
BsaBI	GATNNNNATC	1 cut(s)	450
BsaHI	GRCGYC	1 cut(s)	622
BsaJI	CCNNGG	6 cut(s)	395, 1182, 1339, 1508, 1866, 1933
BsaWI	WCCGGW	1 cut(s)	1388
BsaXI	ACNNNNNCTCC	2 cut(s)	1714, 1744
Bse118I	RCCGGY	2 cut(s)	1388, 2134
Bse21I	CCTNAGG	2 cut(s)	1665, 1734
Bse3DI	GCAATG	1 cut(s)	1406
Bse8I	GATNNNNATC	1 cut(s)	450
BseBI	CCWGG	3 cut(s)	546, 1341, 1713
BseDI	CCNNGG	6 cut(s)	395, 1182, 1339, 1508, 1866, 1933
BseGI	GGATG	4 cut(s)	1639, 1691, 1721, 1871
BseJI	GATNNNNATC	1 cut(s)	450
BseMI	GCAATG	1 cut(s)	1406
BseMII	CTCAG	6 cut(s)	57, 1656, 1748, 1866, 2085, 2163
BseRI	GAGGAG	3 cut(s)	545, 1722, 1827
BseSI	GKGCMC	3 cut(s)	1660, 1776, 1962
BseXI	GCAGC	6 cut(s)	885, 1183, 1426, 1546, 1912, 2089
BseYI	CCCAGC	1 cut(s)	1628
BsgI	GTGCAG	3 cut(s)	1197, 1545, 1686
BshFI	GGCC	6 cut(s)	51, 200, 829, 1052, 1405, 1960
BshTI	ACCGGT	1 cut(s)	1388
BsiHKAI	GWGCWC	2 cut(s)	1327, 1660
BsiSI	CCGG	4 cut(s)	513, 1182, 1389, 2135
BslFI	GGGAC	6 cut(s)	114, 495, 723, 1136, 1511, 1951
BsmAI	GTCTC	3 cut(s)	316, 324, 911
BsmFI	GGGAC	6 cut(s)	114, 495, 723, 1136, 1511, 1951
BsnI	GGCC	6 cut(s)	51, 200, 829, 1052, 1405, 1960
Bsp120I	GGGCCC	1 cut(s)	1958
Bsp1286I	GDGCHC	5 cut(s)	461, 1327, 1660, 1776, 1962
Bsp143I	GATC	6 cut(s)	280, 553, 661, 1586, 1669, 2125
Bsp19I	CCATGG	2 cut(s)	1508, 1866
BspACI	CCGC	2 cut(s)	104, 1886
BspANI	GGCC	6 cut(s)	51, 200, 829, 1052, 1405, 1960
BspCNI	CTCAG	6 cut(s)	58, 1657, 1747, 1865, 2086, 2162
BspLI	GGNNCC	6 cut(s)	102, 841, 883, 896, 1959, 1960
BspMAI	CTGCAG	5 cut(s)	152, 1174, 1201, 1771, 2185
BspMI	ACCTGC	3 cut(s)	967, 1190, 2164
BspOI	GCTAGC	1 cut(s)	1932
BspPI	GGATC	3 cut(s)	275, 1677, 2133
BsrDI	GCAATG	1 cut(s)	1406
BsrFI	RCCGGY	2 cut(s)	1388, 2134
BssAI	RCCGGY	2 cut(s)	1388, 2134
BssECI	CCNNGG	6 cut(s)	395, 1182, 1339, 1508, 1866, 1933
BssMI	GATC	6 cut(s)	280, 553, 661, 1586, 1669, 2125
BssNI	GRCGYC	1 cut(s)	622
BssT1I	CCWWGG	3 cut(s)	1508, 1866, 1933
Bst2UI	CCWGG	3 cut(s)	546, 1341, 1713
Bst4CI	ACNGT	4 cut(s)	570, 1037, 1282, 1609
BstACI	GRCGYC	1 cut(s)	622
BstAPI	GCANNNNNTGC	2 cut(s)	87, 147
BstBAI	YACGTR	2 cut(s)	352, 2029
BstC8I	GCNNGC	4 cut(s)	7, 252, 1930, 2054
BstDEI	CTNAG	7 cut(s)	66, 582, 1665, 1734, 1852, 2094, 2149
BstDSI	CCRYGG	2 cut(s)	1508, 1866
BstF5I	GGATG	4 cut(s)	1639, 1691, 1721, 1871
BstKTI	GATC	6 cut(s)	283, 556, 664, 1589, 1672, 2128
BstMAI	GTCTC	3 cut(s)	316, 324, 911
BstMBI	GATC	6 cut(s)	280, 553, 661, 1586, 1669, 2125
BstMWI	GCNNNNNNNGC	9 cut(s)	87, 147, 465, 1193, 1331, 1411, 1420, 1565, 2099
BstNI	CCWGG	3 cut(s)	546, 1341, 1713
BstNSI	RCATGY	2 cut(s)	347, 1526
BstSCI	CCNGG	5 cut(s)	511, 544, 1181, 1339, 1711
BstSFI	CTRYAG	6 cut(s)	148, 1170, 1197, 1245, 1767, 2181
BstSLI	GKGCMC	3 cut(s)	1660, 1776, 1962
BstV1I	GCAGC	6 cut(s)	885, 1183, 1426, 1546, 1912, 2089
BstX2I	RGATCY	3 cut(s)	280, 1586, 1669
BstXI	CCANNNNNNTGG	1 cut(s)	877
BstYI	RGATCY	3 cut(s)	280, 1586, 1669
Bsu36I	CCTNAGG	2 cut(s)	1665, 1734
BsuI	GTATCC	1 cut(s)	682
BsuRI	GGCC	6 cut(s)	51, 200, 829, 1052, 1405, 1960
BtgI	CCRYGG	2 cut(s)	1508, 1866
BtgZI	GCGATG	1 cut(s)	1694
BtsCI	GGATG	4 cut(s)	1639, 1691, 1721, 1871
BtsI	GCAGTG	3 cut(s)	157, 1764, 1776
BtsIMutI	CAGTG	6 cut(s)	157, 195, 1042, 1228, 1764, 1776
BveI	ACCTGC	3 cut(s)	967, 1190, 2164
Cac8I	GCNNGC	4 cut(s)	7, 252, 1930, 2054
CaiI	CAGNNNCTG	3 cut(s)	1148, 1712, 2156
Cfr10I	RCCGGY	2 cut(s)	1388, 2134
Cfr13I	GGNCC	8 cut(s)	101, 504, 1050, 1727, 1832, 1883, 1958, 1959
CseI	GACGC	2 cut(s)	611, 704
Csp6I	GTAC	4 cut(s)	349, 749, 1605, 1923
CspAI	ACCGGT	1 cut(s)	1388
CspCI	CAANNNNNGTGG	2 cut(s)	133, 168
CviAII	CATG	6 cut(s)	344, 1207, 1509, 1523, 1777, 1867
CviQI	GTAC	4 cut(s)	349, 749, 1605, 1923
DdeI	CTNAG	7 cut(s)	66, 582, 1665, 1734, 1852, 2094, 2149
DpnI	GATC	6 cut(s)	282, 555, 663, 1588, 1671, 2127
DpnII	GATC	6 cut(s)	280, 553, 661, 1586, 1669, 2125
DraIII	CACNNNGTG	1 cut(s)	1037
EaeI	YGGCCR	1 cut(s)	198
Eco130I	CCWWGG	3 cut(s)	1508, 1866, 1933
Eco147I	AGGCCT	2 cut(s)	51, 829
Eco24I	GRGCYC	2 cut(s)	461, 1962
Eco47I	GGWCC	5 cut(s)	101, 504, 1727, 1832, 1883
Eco57I	CTGAAG	1 cut(s)	2046
Eco81I	CCTNAGG	2 cut(s)	1665, 1734
EcoO109I	RGGNCCY	2 cut(s)	1958, 1959
EcoRII	CCWGG	3 cut(s)	544, 1339, 1711
EcoT14I	CCWWGG	3 cut(s)	1508, 1866, 1933
EcoT22I	ATGCAT	2 cut(s)	83, 2005
EcoT38I	GRGCYC	2 cut(s)	461, 1962
ErhI	CCWWGG	3 cut(s)	1508, 1866, 1933
FaeI	CATG	6 cut(s)	347, 1210, 1512, 1526, 1780, 1870
FaqI	GGGAC	6 cut(s)	114, 495, 723, 1136, 1511, 1951
FatI	CATG	6 cut(s)	343, 1206, 1508, 1522, 1776, 1866
FauNDI	CATATG	2 cut(s)	475, 1999
FblI	GTMKAC	1 cut(s)	565
Fnu4HI	GCNGC	6 cut(s)	874, 1197, 1415, 1560, 1901, 2103
FokI	GGATG	4 cut(s)	1646, 1678, 1728, 1858
FriOI	GRGCYC	2 cut(s)	461, 1962
Fsp4HI	GCNGC	6 cut(s)	874, 1197, 1415, 1560, 1901, 2103
FspBI	CTAG	7 cut(s)	443, 557, 1155, 1371, 1407, 1548, 1929
GluI	GCNGC	6 cut(s)	874, 1197, 1415, 1560, 1901, 2103
GsaI	CCCAGC	1 cut(s)	1632
GsuI	CTGGAG	2 cut(s)	1311, 1824
HaeIII	GGCC	6 cut(s)	51, 200, 829, 1052, 1405, 1960
HapII	CCGG	4 cut(s)	513, 1182, 1389, 2135
HgaI	GACGC	2 cut(s)	611, 704
Hin1I	GRCGYC	1 cut(s)	622
Hin1II	CATG	6 cut(s)	347, 1210, 1512, 1526, 1780, 1870
HincII	GTYRAC	3 cut(s)	566, 1305, 1544
HindII	GTYRAC	3 cut(s)	566, 1305, 1544
HinfI	GANTC	8 cut(s)	70, 422, 446, 578, 683, 728, 1115, 2145
HpaII	CCGG	4 cut(s)	513, 1182, 1389, 2135
HphI	GGTGA	4 cut(s)	383, 412, 422, 587
Hpy166II	GTNNAC	8 cut(s)	171, 207, 349, 566, 1305, 1544, 1658, 1832
Hpy188I	TCNGA	5 cut(s)	385, 396, 676, 1129, 2046
Hpy8I	GTNNAC	8 cut(s)	171, 207, 349, 566, 1305, 1544, 1658, 1832
Hpy99I	CGWCG	3 cut(s)	214, 492, 627
HpyCH4III	ACNGT	4 cut(s)	570, 1037, 1282, 1609
HpyCH4IV	ACGT	5 cut(s)	209, 289, 351, 487, 2028
HpyF10VI	GCNNNNNNNGC	9 cut(s)	87, 147, 465, 1193, 1331, 1411, 1420, 1565, 2099
HpyF3I	CTNAG	7 cut(s)	66, 582, 1665, 1734, 1852, 2094, 2149
HpySE526I	ACGT	5 cut(s)	209, 289, 351, 487, 2028
Hsp92I	GRCGYC	1 cut(s)	622
Hsp92II	CATG	6 cut(s)	347, 1210, 1512, 1526, 1780, 1870
Kzo9I	GATC	6 cut(s)	280, 553, 661, 1586, 1669, 2125
LmnI	GCTCC	7 cut(s)	532, 967, 1072, 1096, 1330, 1490, 2075
Lsp1109I	GCAGC	6 cut(s)	885, 1183, 1426, 1546, 1912, 2089
LweI	GCATC	6 cut(s)	68, 934, 1426, 1622, 1880, 2012
MaeI	CTAG	7 cut(s)	443, 557, 1155, 1371, 1407, 1548, 1929
MaeII	ACGT	5 cut(s)	209, 289, 351, 487, 2028
MaeIII	GTNAC	4 cut(s)	410, 1000, 1037, 1202
MalI	GATC	6 cut(s)	282, 555, 663, 1588, 1671, 2127
MboI	GATC	6 cut(s)	280, 553, 661, 1586, 1669, 2125
MboII	GAAGA	4 cut(s)	372, 641, 858, 1662
MfeI	CAATTG	1 cut(s)	1644
MflI	RGATCY	3 cut(s)	280, 1586, 1669
MhlI	GDGCHC	5 cut(s)	461, 1327, 1660, 1776, 1962
MlsI	TGGCCA	1 cut(s)	200
MluNI	TGGCCA	1 cut(s)	200
MmeI	TCCRAC	1 cut(s)	989
Mox20I	TGGCCA	1 cut(s)	200
Mph1103I	ATGCAT	2 cut(s)	83, 2005
MroXI	GAANNNNTTC	2 cut(s)	592, 862
MscI	TGGCCA	1 cut(s)	200
MseI	TTAA	7 cut(s)	57, 84, 222, 339, 932, 1799, 2117
MslI	CAYNNNNRTG	1 cut(s)	1769
Msp20I	TGGCCA	1 cut(s)	200
MspA1I	CMGCKG	2 cut(s)	1196, 1559
MspI	CCGG	4 cut(s)	513, 1182, 1389, 2135
MspR9I	CCNGG	5 cut(s)	513, 546, 1183, 1341, 1713
MunI	CAATTG	1 cut(s)	1644
MvaI	CCWGG	3 cut(s)	546, 1341, 1713
MwoI	GCNNNNNNNGC	9 cut(s)	87, 147, 465, 1193, 1331, 1411, 1420, 1565, 2099
NciI	CCSGG	2 cut(s)	513, 1183
NcoI	CCATGG	2 cut(s)	1508, 1866
NdeI	CATATG	2 cut(s)	475, 1999
NdeII	GATC	6 cut(s)	280, 553, 661, 1586, 1669, 2125
NheI	GCTAGC	1 cut(s)	1928
NlaIII	CATG	6 cut(s)	347, 1210, 1512, 1526, 1780, 1870
NlaIV	GGNNCC	6 cut(s)	102, 841, 883, 896, 1959, 1960
NmeAIII	GCCGAG	1 cut(s)	35
NmuCI	GTSAC	2 cut(s)	410, 1037
NsiI	ATGCAT	2 cut(s)	83, 2005
NspI	RCATGY	2 cut(s)	347, 1526
OliI	CACNNNNGTG	1 cut(s)	1769
PaqCI	CACCTGC	1 cut(s)	2164
PceI	AGGCCT	2 cut(s)	51, 829
PciI	ACATGT	1 cut(s)	1522
PcsI	WCGNNNNNNNCGW	1 cut(s)	43
PdmI	GAANNNNTTC	2 cut(s)	592, 862
PfeI	GAWTC	8 cut(s)	70, 422, 446, 578, 683, 728, 1115, 2145
PflMI	CCANNNNNTGG	3 cut(s)	1223, 1484, 1712
PfoI	TCCNGGA	2 cut(s)	544, 1711
PinAI	ACCGGT	1 cut(s)	1388
PkrI	GCNGC	6 cut(s)	875, 1198, 1416, 1561, 1902, 2104
Ppu21I	YACGTR	2 cut(s)	352, 2029
PscI	ACATGT	1 cut(s)	1522
Psp6I	CCWGG	3 cut(s)	544, 1339, 1711
PspFI	CCCAGC	1 cut(s)	1628
PspGI	CCWGG	3 cut(s)	544, 1339, 1711
PspN4I	GGNNCC	6 cut(s)	102, 841, 883, 896, 1959, 1960
PspOMI	GGGCCC	1 cut(s)	1958
PspPI	GGNCC	8 cut(s)	101, 504, 1050, 1727, 1832, 1883, 1958, 1959
PstI	CTGCAG	5 cut(s)	152, 1174, 1201, 1771, 2185
PstNI	CAGNNNCTG	3 cut(s)	1148, 1712, 2156
PsuI	RGATCY	3 cut(s)	280, 1586, 1669
PvuII	CAGCTG	2 cut(s)	1196, 1559
RsaI	GTAC	4 cut(s)	350, 750, 1606, 1924
RsaNI	GTAC	4 cut(s)	349, 749, 1605, 1923
RseI	CAYNNNNRTG	1 cut(s)	1769
SalI	GTCGAC	1 cut(s)	564
SaqAI	TTAA	7 cut(s)	57, 84, 222, 339, 932, 1799, 2117
SatI	GCNGC	6 cut(s)	874, 1197, 1415, 1560, 1901, 2103
Sau3AI	GATC	6 cut(s)	280, 553, 661, 1586, 1669, 2125
Sau96I	GGNCC	8 cut(s)	101, 504, 1050, 1727, 1832, 1883, 1958, 1959
ScaI	AGTACT	1 cut(s)	1606
ScrFI	CCNGG	5 cut(s)	513, 546, 1183, 1341, 1713
SduI	GDGCHC	5 cut(s)	461, 1327, 1660, 1776, 1962
SfaNI	GCATC	6 cut(s)	68, 934, 1426, 1622, 1880, 2012
SfcI	CTRYAG	6 cut(s)	148, 1170, 1197, 1245, 1767, 2181
SinI	GGWCC	5 cut(s)	101, 504, 1727, 1832, 1883
SmiMI	CAYNNNNRTG	1 cut(s)	1769
SmlI	CTYRAG	2 cut(s)	981, 1086
SmoI	CTYRAG	2 cut(s)	981, 1086
SseBI	AGGCCT	2 cut(s)	51, 829
SsiI	CCGC	2 cut(s)	104, 1886
SspMI	CTAG	7 cut(s)	443, 557, 1155, 1371, 1407, 1548, 1929
StuI	AGGCCT	2 cut(s)	51, 829
StyD4I	CCNGG	5 cut(s)	511, 544, 1181, 1339, 1711
StyI	CCWWGG	3 cut(s)	1508, 1866, 1933
TaaI	ACNGT	4 cut(s)	570, 1037, 1282, 1609
TaiI	ACGT	5 cut(s)	212, 292, 354, 490, 2031
TaqI	TCGA	5 cut(s)	46, 328, 463, 565, 625
TatI	WGTACW	1 cut(s)	1604
TfiI	GAWTC	8 cut(s)	70, 422, 446, 578, 683, 728, 1115, 2145
Tru1I	TTAA	7 cut(s)	57, 84, 222, 339, 932, 1799, 2117
Tru9I	TTAA	7 cut(s)	57, 84, 222, 339, 932, 1799, 2117
TscAI	CASTG	6 cut(s)	157, 195, 1042, 1228, 1771, 1776
TseFI	GTSAC	2 cut(s)	410, 1037
TseI	GCWGC	6 cut(s)	873, 1196, 1414, 1559, 1900, 2102
Tsp45I	GTSAC	2 cut(s)	410, 1037
TspDTI	ATGAA	8 cut(s)	48, 438, 444, 498, 1680, 1697, 1959, 2103
TspGWI	ACGGA	3 cut(s)	52, 782, 832
TspRI	CASTG	6 cut(s)	157, 195, 1042, 1228, 1771, 1776
Van91I	CCANNNNNTGG	3 cut(s)	1223, 1484, 1712
VneI	GTGCAC	1 cut(s)	1656
VpaK11BI	GGWCC	5 cut(s)	101, 504, 1727, 1832, 1883
XapI	RAATTY	4 cut(s)	1105, 1513, 1621, 2040
XbaI	TCTAGA	1 cut(s)	556
XceI	RCATGY	2 cut(s)	347, 1526
XcmI	CCANNNNNNNNNTGG	2 cut(s)	742, 1713
XmiI	GTMKAC	1 cut(s)	565
XmnI	GAANNNNTTC	2 cut(s)	592, 862
XspI	CTAG	7 cut(s)	443, 557, 1155, 1371, 1407, 1548, 1929
ZrmI	AGTACT	1 cut(s)	1606
Zsp2I	ATGCAT	2 cut(s)	83, 2005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.