Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001556

Physical Location & Seq

Genomic Coordinates Forward (+)

2622932 .. 2625930

Gene Structure 2999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0033300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGTGCTCTATAAGTGCCTCTATGATCAACATCTACACCATCGGGGATTTACAAATCGGAAAAGTAGTTTGGAAAGTGAGAAGATCGATGAGGAATTCAAGTGGGTGGATTCTGGGGACGTTATTATTTTTGGGTGGTTTTTTCTTTGTTCATGTTGCGGCAAGTTCACCGAGAAGTCATCGTCTACTGGCGCAAGATGCGGTCGAGATCAAGATGGTAAAAAATGGAGTTGTGTTGGATAATAAGCTTGTTCAACTAACTTTTTCTAATCCTGGTGGGGATGTTGTTGGAATAAGGTATGGAGGAATTGACAACTTACTTGAAATTAACAACAATGAAGATGATAGAGGGTACTGGGATGTGGTTTGGAATAACCCGGGAGAGACGAAAAACACACAATACAGAATACAAGGAACACAATTTAAAGTAATCACGGAGAGGCCAGACCAAGTAGAAGTTTCTTTCATCTCCACATACAATGCCAAGCTCCAGCGGGGTGTGACAGTTCCGGTGAATGTTGACAGAAGATACATAATGCAGCAAGGACGTTCCGGGTTCTATACCTATGCCATCTTCGAGCGCCTTGAAGGGTGGCCAGGAGGGGACATGGAGCAAGTTAGAGTGGCTTACAAGCTTCATCAAGCCAAGTTTCGATATATGGCGCTATCGGACACAAGGCAAAGGTTCATGCCAACAGACGATGACCGAGCACGCGGTAGGCCACTTGCATTCAAAGAAGCTGTTCTACTGAACAATAAGACGAGCAATCCTGAATTTGAAGGGGAGGTGGATGATAAGTATCAGTACTCGGCCGACGACAAAGATATCAAGGTGCATGGTTGGATTTCTATTGATGACCAATCACCACCGGTGGGATTTTGGATGATCACACCTAGTGCTGAGTTTCGTATGGGTGGTCCTTTCAAGCAGGACCTCACCTCTCACGTTGGACCAACTTGCCTAACTGGGTTTGCTTCTCATCATTATGTTGGTAAAGAAGTTGGGCTGACATTCCAAGATGGTGAGGTATGGAAAAAGGTTTTCGGACCTGTCTTTATCTATCTTAACTCGGCAGCACGAAATTCAGCTAATAGTCCTTCAACGATCCGTACACTATGGAACAATGCCAAAGATCAAATGCTTGAAGAAGTCAAAAGTTGGCCATACAATTTCATTAGTTCTCAAGACTTTCCTTCTTCAGATCAACGTGGATCAGTTTCGGGCCAGTTACTAGTACATGATCGATACATTGGAAGTCTTCCAAGGACAAGTTTGGCTTATGTAGGATTGGCTGCACCCGGAGAAGTTGGATCATGGCAAAGGGAAAGCAAGGGATACCAATTTTGGACTCAAACCGATGAAAAAGGCTATTTCCTCATTGAAAATATTAGACCCGGTAACTATAATTTGTATGCATCTGTTCCGGGGATAGTTGGAGACTACAAATATGAGGTTGACATTACAATTGAACCAGGAAGTAAAATCCAATTGGCTAGTATTACTTACAAACCTCCGAGAACCGGTCCTACATTGTGGGAAATTGGCATTCCTGATCGCACAGCTGCGGAGTTCTACATACCGGATCCATTTCCAACTCTCATGAACAAGTTGTACAAGGGGAGTCGGTTGGACAAGTTTAGGCAGTACGGGTTGTGGGCACGTTATTATGAGCGTTACCCTAACAATGACCTCATCTACCGTGTTGGTGCTAGCAATTACAGTGAGGATTGGTTTTATGCTCAAGTGACTAGAAGTGTAGGAAATGGCCGGTATGTAGGAACTACATGGCAGATACAGTTTGAACTCAAGAATGTGGTCAATCCCGGAAACTATACACTTCAACTGGCCTTGGCATCAACCACTTATGCAGAATTGCAAGTTCGGGTTAACAATTTGAATGCCAAGCCACCTCTTTTTTCGACAGGGCTAATAGGCGACGACAATGCTATAGCAAGACTTGGAATTCATGGCTTATACTGGTTATGGAGTATTGATGTACCGAGCACTCTACTACGTGAAGGAAGCAACACCATCTATCTTACTCAGTCCAGAGATGGCAATTCACCTTTCCACGGAGTCATGTATGATTATATAAGACTAGAAGGACCTTCTGAGAAACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0001666 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008194 GO:0009266 GO:0009409 GO:0009413 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010037 GO:0010038 GO:0010154 GO:0010431 GO:0010555 GO:0016020 GO:0016043 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0021700 GO:0022414 GO:0022607 GO:0030054 GO:0032501 GO:0032502 GO:0032504 GO:0034059 GO:0034284 GO:0034285 GO:0035251 GO:0036293 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0046686 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051259 GO:0051262 GO:0055044 GO:0061458 GO:0065003 GO:0070482 GO:0071695 GO:0071840 GO:0071944 GO:0072347 GO:0072708 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

707

Amino Acids

80.18

Weight (kDa)

7.66

Isoelectric Point (pI)

32.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	64 - 263	2.9e-75	Rhamnogalacturonate lyase family
fn3_3	PF14686	426 - 497	2.6e-24	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	510 - 700	4.1e-49	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001556)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43190 AT3G43190 AT5G20830 AT5G20830 AT5G20830
fragaria_vesca	FvH4_1g07260 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360 FvH4_1g09360
malus_domestica	MD02G1100500.v1.1 MD02G1100600.v1.1 MD15G1223500.v1.1
prunus_persica	Prupe.2G242300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1 Prupe.7G192300_v2.0.a1
pyrus_communis	pycom02g07890 pycom15g19770
rosa_chinensis	RchiOBHm_Chr2g0093161 RchiOBHm_Chr2g0095901
rosa_laevigata	RLG00000016373 RLG00000016605
rosa_multiflora	Rmu_sc0003724.1_g000005 Rmu_sc0014241.1_g000002 Rmu_sc0038852.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145980 Rroxscaffold_2G00148460
rosa_rugosa	Rorug02G0033300 Rorug02G0053600 Rorug02G0053600 Rorug02G0053700 Rorug02G0053800
rosa_samantha	Rh2AG079000 Rh2AG102900 Rh2BG080300 Rh2BG104300 Rh2CG082500 Rh2CG106800 Rh2DG078000 Rh2DG104500
rosa_wichuraiana	Rw2G006750 Rw2G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	184
AccII	CGCG	1 cut(s)	714
AciI	CCGC	5 cut(s)	158, 200, 493, 714, 1565
AclWI	GGATC	5 cut(s)	1099, 1219, 1318, 1577, 1590
AcoI	YGGCCR	4 cut(s)	593, 810, 1160, 1765
AcsI	RAATTY	4 cut(s)	94, 773, 1081, 1962
AcuI	CTGAAG	1 cut(s)	1182
AdeI	CACNNNGTG	1 cut(s)	896
AfaI	GTAC	7 cut(s)	353, 806, 1111, 1236, 1613, 1646, 1998
AfiI	CCNNNNNNNGG	3 cut(s)	872, 1520, 2072
AgeI	ACCGGT	2 cut(s)	868, 1520
AhlI	ACTAGT	1 cut(s)	1231
AjnI	CCWGG	3 cut(s)	271, 595, 1471
AjuI	GAANNNNNNNTTGG	2 cut(s)	52, 84
AluBI	AGCT	6 cut(s)	247, 487, 634, 740, 1088, 1562
AluI	AGCT	6 cut(s)	247, 487, 634, 740, 1088, 1562
Alw21I	GWGCWC	3 cut(s)	8, 712, 2006
Alw26I	GTCTC	2 cut(s)	377, 1431
AlwI	GGATC	5 cut(s)	1099, 1219, 1318, 1577, 1590
Ama87I	CYCGRG	1 cut(s)	376
AoxI	GGCC	8 cut(s)	440, 593, 719, 810, 1160, 1222, 1765, 1845
ApeKI	GCWGC	4 cut(s)	538, 1073, 1292, 1562
ApoI	RAATTY	4 cut(s)	94, 773, 1081, 1962
AsiGI	ACCGGT	2 cut(s)	868, 1520
Asp700I	GAANNNNTTC	1 cut(s)	741
AspLEI	GCGC	3 cut(s)	193, 582, 664
AspS9I	GGNCC	7 cut(s)	917, 931, 950, 1046, 1222, 1523, 2105
AsuC2I	CCSGG	7 cut(s)	377, 378, 553, 1299, 1395, 1425, 1824
AsuHPI	GGTGA	6 cut(s)	159, 523, 855, 928, 1034, 2055
AsuNHI	GCTAGC	1 cut(s)	1709
AvaI	CYCGRG	1 cut(s)	376
AvaII	GGWCC	6 cut(s)	917, 931, 950, 1046, 1523, 2105
BaeGI	GKGCMC	1 cut(s)	1660
BalI	TGGCCA	2 cut(s)	595, 1162
BamHI	GGATCC	1 cut(s)	1582
BarI	GAAGNNNNNNTAC	2 cut(s)	729, 761
BbsI	GAAGAC	1 cut(s)	1250
Bbv12I	GWGCWC	3 cut(s)	8, 712, 2006
BbvI	GCAGC	4 cut(s)	550, 1085, 1279, 1549
BccI	CCATC	6 cut(s)	47, 208, 578, 1013, 2039, 2048
BcgI	CGANNNNNNTGC	2 cut(s)	1925, 1959
BciT130I	CCWGG	3 cut(s)	273, 597, 1473
BciVI	GTATCC	1 cut(s)	1328
BclI	TGATCA	2 cut(s)	24, 885
BcnI	CCSGG	7 cut(s)	377, 378, 553, 1299, 1395, 1425, 1824
BcoDI	GTCTC	2 cut(s)	377, 1431
BcuI	ACTAGT	1 cut(s)	1231
BfaI	CTAG	6 cut(s)	894, 1232, 1494, 1710, 1749, 2099
BfmI	CTRYAG	1 cut(s)	1947
BfoI	RGCGCY	2 cut(s)	583, 665
BfuI	GTATCC	1 cut(s)	1328
BisI	GCNGC	5 cut(s)	159, 539, 1074, 1293, 1563
BlsI	GCNGC	5 cut(s)	160, 540, 1075, 1294, 1564
BmcAI	AGTACT	1 cut(s)	806
Bme18I	GGWCC	6 cut(s)	917, 931, 950, 1046, 1523, 2105
BmeT110I	CYCGRG	1 cut(s)	376
BmgT120I	GGNCC	7 cut(s)	917, 931, 950, 1046, 1222, 1523, 2105
BmiI	GGNNCC	1 cut(s)	1584
BmrI	ACTGGG	2 cut(s)	364, 975
BmsI	GCATC	3 cut(s)	187, 1424, 1862
BmtI	GCTAGC	1 cut(s)	1713
BmuI	ACTGGG	2 cut(s)	364, 975
BpiI	GAAGAC	1 cut(s)	1250
BpmI	CTGGAG	1 cut(s)	473
BpuEI	CTTGAG	3 cut(s)	1167, 1725, 1790
BpuMI	CCSGG	7 cut(s)	377, 378, 553, 1299, 1395, 1425, 1824
Bsa29I	ATCGAT	2 cut(s)	86, 1243
BsaAI	YACGTR	1 cut(s)	2015
BsaBI	GATNNNNATC	2 cut(s)	29, 798
BsaJI	CCNNGG	5 cut(s)	376, 1262, 1424, 1848, 2071
BsaWI	WCCGGW	4 cut(s)	508, 868, 1520, 1579
Bsc4I	CCNNNNNNNGG	3 cut(s)	872, 1520, 2072
Bse118I	RCCGGY	3 cut(s)	868, 1520, 1767
Bse1I	ACTGG	6 cut(s)	192, 359, 970, 1225, 1848, 1982
Bse8I	GATNNNNATC	2 cut(s)	29, 798
BseBI	CCWGG	3 cut(s)	273, 597, 1473
BseCI	ATCGAT	2 cut(s)	86, 1243
BseDI	CCNNGG	5 cut(s)	376, 1262, 1424, 1848, 2071
BseGI	GGATG	4 cut(s)	286, 364, 796, 888
BseJI	GATNNNNATC	2 cut(s)	29, 798
BseLI	CCNNNNNNNGG	3 cut(s)	872, 1520, 2072
BseMII	CTCAG	3 cut(s)	891, 2057, 2103
BseNI	ACTGG	6 cut(s)	192, 359, 970, 1225, 1848, 1982
BseSI	GKGCMC	1 cut(s)	1660
BseX3I	CGGCCG	1 cut(s)	810
BseXI	GCAGC	4 cut(s)	550, 1085, 1279, 1549
BsgI	GTGCAG	1 cut(s)	1278
Bsh1236I	CGCG	1 cut(s)	714
Bsh1285I	CGRYCG	2 cut(s)	204, 813
BshFI	GGCC	8 cut(s)	442, 595, 721, 812, 1162, 1224, 1767, 1847
BshTI	ACCGGT	2 cut(s)	868, 1520
BshVI	ATCGAT	2 cut(s)	86, 1243
BsiEI	CGRYCG	2 cut(s)	204, 813
BsiHKAI	GWGCWC	3 cut(s)	8, 712, 2006
BsiHKCI	CYCGRG	1 cut(s)	376
BslFI	GGGAC	2 cut(s)	130, 617
BslI	CCNNNNNNNGG	3 cut(s)	872, 1520, 2072
BsmAI	GTCTC	2 cut(s)	377, 1431
BsmBI	CGTCTC	1 cut(s)	377
BsmFI	GGGAC	2 cut(s)	130, 617
BsmI	GAATGC	3 cut(s)	728, 1545, 1903
BsnI	GGCC	8 cut(s)	442, 595, 721, 812, 1162, 1224, 1767, 1847
BsoBI	CYCGRG	1 cut(s)	376
Bsp1286I	GDGCHC	4 cut(s)	8, 712, 1660, 2006
Bsp1407I	TGTACA	1 cut(s)	1611
BspACI	CCGC	5 cut(s)	158, 200, 493, 714, 1565
BspANI	GGCC	8 cut(s)	442, 595, 721, 812, 1162, 1224, 1767, 1847
BspCNI	CTCAG	3 cut(s)	892, 2056, 2104
BspDI	ATCGAT	2 cut(s)	86, 1243
BspFNI	CGCG	1 cut(s)	714
BspHI	TCATGA	1 cut(s)	1599
BspLI	GGNNCC	1 cut(s)	1584
BspOI	GCTAGC	1 cut(s)	1713
BspPI	GGATC	5 cut(s)	1099, 1219, 1318, 1577, 1590
BsrFI	RCCGGY	3 cut(s)	868, 1520, 1767
BsrGI	TGTACA	1 cut(s)	1611
BsrI	ACTGG	6 cut(s)	192, 359, 970, 1225, 1848, 1982
BssAI	RCCGGY	3 cut(s)	868, 1520, 1767
BssECI	CCNNGG	5 cut(s)	376, 1262, 1424, 1848, 2071
BssT1I	CCWWGG	2 cut(s)	1262, 1848
Bst2UI	CCWGG	3 cut(s)	273, 597, 1473
Bst4CI	ACNGT	4 cut(s)	505, 1700, 1721, 1797
BstAUI	TGTACA	1 cut(s)	1611
BstBAI	YACGTR	1 cut(s)	2015
BstC8I	GCNNGC	2 cut(s)	712, 1711
BstDEI	CTNAG	3 cut(s)	900, 2043, 2112
BstDSI	CCRYGG	1 cut(s)	2071
BstF5I	GGATG	4 cut(s)	286, 364, 796, 888
BstFNI	CGCG	1 cut(s)	714
BstH2I	RGCGCY	2 cut(s)	583, 665
BstHHI	GCGC	3 cut(s)	193, 582, 664
BstMAI	GTCTC	2 cut(s)	377, 1431
BstMCI	CGRYCG	2 cut(s)	204, 813
BstMWI	GCNNNNNNNGC	1 cut(s)	197
BstNI	CCWGG	3 cut(s)	273, 597, 1473
BstSFI	CTRYAG	1 cut(s)	1947
BstSLI	GKGCMC	1 cut(s)	1660
BstUI	CGCG	1 cut(s)	714
BstV1I	GCAGC	4 cut(s)	550, 1085, 1279, 1549
BstV2I	GAAGAC	1 cut(s)	1250
BstX2I	RGATCY	1 cut(s)	1582
BstYI	RGATCY	1 cut(s)	1582
BstZI	CGGCCG	1 cut(s)	810
Bsu15I	ATCGAT	2 cut(s)	86, 1243
BsuI	GTATCC	1 cut(s)	1328
BsuRI	GGCC	8 cut(s)	442, 595, 721, 812, 1162, 1224, 1767, 1847
BsuTUI	ATCGAT	2 cut(s)	86, 1243
BtgI	CCRYGG	1 cut(s)	2071
BtsCI	GGATG	4 cut(s)	286, 364, 796, 888
BtsIMutI	CAGTG	1 cut(s)	1726
Cac8I	GCNNGC	2 cut(s)	712, 1711
CciI	TCATGA	1 cut(s)	1599
CfoI	GCGC	3 cut(s)	193, 582, 664
Cfr10I	RCCGGY	3 cut(s)	868, 1520, 1767
Cfr13I	GGNCC	7 cut(s)	917, 931, 950, 1046, 1222, 1523, 2105
Cfr9I	CCCGGG	1 cut(s)	376
ClaI	ATCGAT	2 cut(s)	86, 1243
Csp6I	GTAC	7 cut(s)	352, 805, 1110, 1235, 1612, 1645, 1997
CspAI	ACCGGT	2 cut(s)	868, 1520
CviQI	GTAC	7 cut(s)	352, 805, 1110, 1235, 1612, 1645, 1997
DdeI	CTNAG	3 cut(s)	900, 2043, 2112
DraI	TTTAAA	1 cut(s)	424
DraIII	CACNNNGTG	1 cut(s)	896
EaeI	YGGCCR	4 cut(s)	593, 810, 1160, 1765
EagI	CGGCCG	1 cut(s)	810
EclXI	CGGCCG	1 cut(s)	810
Eco130I	CCWWGG	2 cut(s)	1262, 1848
Eco32I	GATATC	1 cut(s)	826
Eco47I	GGWCC	6 cut(s)	917, 931, 950, 1046, 1523, 2105
Eco52I	CGGCCG	1 cut(s)	810
Eco57I	CTGAAG	1 cut(s)	1182
Eco88I	CYCGRG	1 cut(s)	376
EcoO109I	RGGNCCY	2 cut(s)	931, 2105
EcoRI	GAATTC	2 cut(s)	94, 1962
EcoRII	CCWGG	3 cut(s)	271, 595, 1471
EcoRV	GATATC	1 cut(s)	826
EcoT14I	CCWWGG	2 cut(s)	1262, 1848
EcoT22I	ATGCAT	1 cut(s)	1417
ErhI	CCWWGG	2 cut(s)	1262, 1848
Esp3I	CGTCTC	1 cut(s)	377
FalI	AAGNNNNNCTT	2 cut(s)	1261, 1293
FaqI	GGGAC	2 cut(s)	130, 617
FauI	CCCGC	1 cut(s)	486
FbaI	TGATCA	2 cut(s)	24, 885
FblI	GTMKAC	1 cut(s)	184
Fnu4HI	GCNGC	5 cut(s)	159, 539, 1074, 1293, 1563
FokI	GGATG	4 cut(s)	293, 371, 803, 895
Fsp4HI	GCNGC	5 cut(s)	159, 539, 1074, 1293, 1563
FspBI	CTAG	6 cut(s)	894, 1232, 1494, 1710, 1749, 2099
GlaI	GCGC	3 cut(s)	192, 581, 663
GluI	GCNGC	5 cut(s)	159, 539, 1074, 1293, 1563
GsuI	CTGGAG	1 cut(s)	473
HaeII	RGCGCY	2 cut(s)	583, 665
HaeIII	GGCC	8 cut(s)	442, 595, 721, 812, 1162, 1224, 1767, 1847
HhaI	GCGC	3 cut(s)	193, 582, 664
Hin6I	GCGC	3 cut(s)	191, 580, 662
HinP1I	GCGC	3 cut(s)	191, 580, 662
HincII	GTYRAC	3 cut(s)	520, 1456, 1888
HindII	GTYRAC	3 cut(s)	520, 1456, 1888
HindIII	AAGCTT	2 cut(s)	245, 632
HinfI	GANTC	4 cut(s)	109, 1348, 1621, 2076
HpaI	GTTAAC	1 cut(s)	1888
HphI	GGTGA	6 cut(s)	159, 523, 855, 928, 1034, 2055
Hpy166II	GTNNAC	6 cut(s)	167, 185, 520, 1112, 1456, 1888
Hpy188I	TCNGA	6 cut(s)	59, 670, 1046, 1201, 1515, 2113
Hpy188III	TCNNGA	8 cut(s)	205, 211, 770, 1184, 1550, 1600, 1807, 2049
Hpy8I	GTNNAC	6 cut(s)	167, 185, 520, 1112, 1456, 1888
Hpy99I	CGWCG	2 cut(s)	818, 1940
HpyAV	CCTTC	7 cut(s)	581, 773, 1107, 1203, 2012, 2096, 2118
HpyCH4III	ACNGT	4 cut(s)	505, 1700, 1721, 1797
HpyCH4IV	ACGT	6 cut(s)	119, 547, 945, 1207, 1660, 2014
HpyCH4V	TGCA	7 cut(s)	538, 728, 835, 1295, 1415, 1868, 1876
HpyF10VI	GCNNNNNNNGC	1 cut(s)	197
HpyF3I	CTNAG	3 cut(s)	900, 2043, 2112
HpySE526I	ACGT	6 cut(s)	119, 547, 945, 1207, 1660, 2014
HspAI	GCGC	3 cut(s)	191, 580, 662
Ksp22I	TGATCA	2 cut(s)	24, 885
KspAI	GTTAAC	1 cut(s)	1888
LmnI	GCTCC	2 cut(s)	492, 610
Lsp1109I	GCAGC	4 cut(s)	550, 1085, 1279, 1549
LweI	GCATC	3 cut(s)	187, 1424, 1862
MaeI	CTAG	6 cut(s)	894, 1232, 1494, 1710, 1749, 2099
MaeII	ACGT	6 cut(s)	119, 547, 945, 1207, 1660, 2014
MaeIII	GTNAC	5 cut(s)	499, 1227, 1397, 1673, 1744
MboII	GAAGA	7 cut(s)	93, 350, 537, 565, 1157, 1188, 1250
MfeI	CAATTG	2 cut(s)	1464, 1487
MflI	RGATCY	1 cut(s)	1582
MhlI	GDGCHC	4 cut(s)	8, 712, 1660, 2006
MlsI	TGGCCA	2 cut(s)	595, 1162
MluNI	TGGCCA	2 cut(s)	595, 1162
MlyI	GAGTC	3 cut(s)	1342, 1630, 2085
MmeI	TCCRAC	8 cut(s)	216, 268, 821, 928, 1288, 1414, 1608, 1616
Mox20I	TGGCCA	2 cut(s)	595, 1162
Mph1103I	ATGCAT	1 cut(s)	1417
MroXI	GAANNNNTTC	1 cut(s)	741
MscI	TGGCCA	2 cut(s)	595, 1162
MseI	TTAA	4 cut(s)	327, 423, 1065, 1887
MslI	CAYNNNNRTG	1 cut(s)	984
Msp20I	TGGCCA	2 cut(s)	595, 1162
MspA1I	CMGCKG	2 cut(s)	493, 1562
MunI	CAATTG	2 cut(s)	1464, 1487
Mva1269I	GAATGC	3 cut(s)	728, 1545, 1903
MvaI	CCWGG	3 cut(s)	273, 597, 1473
MvnI	CGCG	1 cut(s)	714
MwoI	GCNNNNNNNGC	1 cut(s)	197
NciI	CCSGG	7 cut(s)	377, 378, 553, 1299, 1395, 1425, 1824
NheI	GCTAGC	1 cut(s)	1709
NlaIV	GGNNCC	1 cut(s)	1584
NmeAIII	GCCGAG	2 cut(s)	788, 1049
NmuCI	GTSAC	2 cut(s)	499, 1744
NsiI	ATGCAT	1 cut(s)	1417
PagI	TCATGA	1 cut(s)	1599
PctI	GAATGC	3 cut(s)	728, 1545, 1903
PdmI	GAANNNNTTC	1 cut(s)	741
PfeI	GAWTC	1 cut(s)	109
PfoI	TCCNGGA	1 cut(s)	1822
PinAI	ACCGGT	2 cut(s)	868, 1520
PkrI	GCNGC	5 cut(s)	160, 540, 1075, 1294, 1564
PleI	GAGTC	3 cut(s)	1342, 1629, 2084
PpsI	GAGTC	3 cut(s)	1342, 1629, 2084
Ppu21I	YACGTR	1 cut(s)	2015
PpuMI	RGGWCCY	2 cut(s)	931, 2105
Psp5II	RGGWCCY	2 cut(s)	931, 2105
Psp6I	CCWGG	3 cut(s)	271, 595, 1471
PspGI	CCWGG	3 cut(s)	271, 595, 1471
PspN4I	GGNNCC	1 cut(s)	1584
PspPI	GGNCC	7 cut(s)	917, 931, 950, 1046, 1222, 1523, 2105
PspPPI	RGGWCCY	2 cut(s)	931, 2105
PsrI	GAACNNNNNNTAC	4 cut(s)	1510, 1542, 1595, 1627
PsuI	RGATCY	1 cut(s)	1582
PvuII	CAGCTG	1 cut(s)	1562
RsaI	GTAC	7 cut(s)	353, 806, 1111, 1236, 1613, 1646, 1998
RsaNI	GTAC	7 cut(s)	352, 805, 1110, 1235, 1612, 1645, 1997
RseI	CAYNNNNRTG	1 cut(s)	984
SaqAI	TTAA	4 cut(s)	327, 423, 1065, 1887
SatI	GCNGC	5 cut(s)	159, 539, 1074, 1293, 1563
Sau96I	GGNCC	7 cut(s)	917, 931, 950, 1046, 1222, 1523, 2105
ScaI	AGTACT	1 cut(s)	806
SchI	GAGTC	3 cut(s)	1342, 1630, 2085
SduI	GDGCHC	4 cut(s)	8, 712, 1660, 2006
SfaNI	GCATC	3 cut(s)	187, 1424, 1862
SfcI	CTRYAG	1 cut(s)	1947
SgrAI	CRCCGGYG	1 cut(s)	868
SinI	GGWCC	6 cut(s)	917, 931, 950, 1046, 1523, 2105
SmaI	CCCGGG	1 cut(s)	378
SmiMI	CAYNNNNRTG	1 cut(s)	984
SmlI	CTYRAG	3 cut(s)	1182, 1740, 1805
SmoI	CTYRAG	3 cut(s)	1182, 1740, 1805
SpeI	ACTAGT	1 cut(s)	1231
SsiI	CCGC	5 cut(s)	158, 200, 493, 714, 1565
SspI	AATATT	1 cut(s)	1387
SspMI	CTAG	6 cut(s)	894, 1232, 1494, 1710, 1749, 2099
StyI	CCWWGG	2 cut(s)	1262, 1848
TaaI	ACNGT	4 cut(s)	505, 1700, 1721, 1797
TaiI	ACGT	6 cut(s)	122, 550, 948, 1210, 1663, 2017
TaqI	TCGA	6 cut(s)	86, 204, 576, 652, 1243, 1919
TaqII	GACCGA	1 cut(s)	720
TatI	WGTACW	3 cut(s)	804, 1234, 1611
TauI	GCSGC	1 cut(s)	161
TfiI	GAWTC	1 cut(s)	109
Tru1I	TTAA	4 cut(s)	327, 423, 1065, 1887
Tru9I	TTAA	4 cut(s)	327, 423, 1065, 1887
TscAI	CASTG	1 cut(s)	1726
TseFI	GTSAC	2 cut(s)	499, 1744
TseI	GCWGC	4 cut(s)	538, 1073, 1292, 1562
Tsp45I	GTSAC	2 cut(s)	499, 1744
TspDTI	ATGAA	9 cut(s)	140, 351, 454, 626, 676, 1162, 1374, 1616, 1955
TspGWI	ACGGA	3 cut(s)	449, 1097, 2088
TspMI	CCCGGG	1 cut(s)	376
TspRI	CASTG	1 cut(s)	1726
VpaK11BI	GGWCC	6 cut(s)	917, 931, 950, 1046, 1523, 2105
XapI	RAATTY	4 cut(s)	94, 773, 1081, 1962
XmaI	CCCGGG	1 cut(s)	376
XmiI	GTMKAC	1 cut(s)	184
XmnI	GAANNNNTTC	1 cut(s)	741
XspI	CTAG	6 cut(s)	894, 1232, 1494, 1710, 1749, 2099
ZrmI	AGTACT	1 cut(s)	806
Zsp2I	ATGCAT	1 cut(s)	1417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.