Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0007131

Physical Location & Seq

Genomic Coordinates Forward (+)

6294526 .. 6297778

Gene Structure 3253 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016398

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGCTCCTCCCAAAATCTTACTCTGCGGCGATGTCTCCGGCGACCTCAAGAAGCTCTTCAAACGAGTCGTTTCGGTCAACAAATCGGCCGGTCCGTTCGACGCGTTGTTCTGCGTCGGCCAGTTCTTCCCCGACTCGGCGGACCAGCTCGAGGAGTTCACCGGTTACATCGAAGGCCGGGCCGGGATTCCTCTCCCGACCTACTTCATCGGCGACTATGGCGTCGGTGCCACTAAGTTTCTCTTGGCCGCAACCAAGGACTCCGGGAACCAAGGCTTCAAAATGGACGGGTTGAAGGTTTGCAACAATCTCTACTGGCTGAAAGGCAGTGGCAAATTCACCTTCCACGGGTTATCGGTGGTGTATTTCTCCGGTCTGCAATCTTCTGATAGACAACAGTTTGGGACTTACAGTCAGGATGATGTTGATGCACTGCGAGCAATTGCTGAGGATCCTGGGATTGTTGACTTGGGGGTTACAAATAAAGCAGCTACATCTGATGTTCCTCCCGGAGCCTCTGAGCCTTTTGGCACTGACTCTACTGTGGCAGAGTTAGTAGCTGAGATCAAACCACGGTATCATATTGCAGGCACCAAAGGCATTTTCTATGCACGTGAGCCTTACTCCAATGTCGATGCTGTGCATATCACCCGCTTCATAGGTCTTGCTCCAGTTGGAAACAAAGACAAGCAGAAATTTCTTCATGCGCTTTCTCCTACTCCAGCATCTACTATGTCTGCTCTTGAAATTAAGACAAAATCACCAAATACTACCTTGTCTCCATACGTGTATATCGAGGGAACAGCTAATGCAAAAGAAGGTGCAAAGAGGTCTAGTGATAGTGTTTCTGATTCTGATTCACAGTACTGGAGATATGATGTCTCCCAAAAAAGGCAGAAACATGGAGCTGGAGATGGTAATAGGCTGTGCTTTAAGTTTGTATCCTCCGGTTCTTGTCCACGAGGGGAAACTTGCAACTTTCAACATGACATGGATGCAAGAGAACAATCTTTGAGAGGTGTTTGCTTCGATTTTATGAACAAAGGAAAGTGTGAAAGGGGTACTGATTGCAAATTTAAGCACAGCTTACAGGATGAAGGTGAAAGCAATTCTCACAAGAGACGCACTGGAAATGCTACCAGGTCGACGGAGTGCTGGTTTTGTTTGTCAAGCTCCAAAATAGAGTCTCATCTATTTATCAGCTTAGGGGAGCATTACTACTGTGCACTTGCTAAAGGCCCACTTGTTGAAGACCACGTATTGCTAATCCCTATTGGGCATTCACCCAATACCCTTTCTCTACCCTCTGAATGCGAGATTGAGCTTGGTAAATTCCAGGATGGTCTTAAAAAGTTTTATAAGAAACAAGACAAGGAAGTAGTTTTCTTTGAGTGGGCTTCAAAACGTTCAACTCATGCCAATCTTCAGGTCGTTCCTATTCCATCAGCCAAAGCAGCTAGTGTTCAAAACTTGTTTCACTTAGCTGCTGACAGGTTCGAATTCAAATTTACGACCACAAAATTCAGTAACAGTTCTGATGGGAGAAAATCGTTGAGGACCCAGTTTGATAGAAATTTTAGCTTCTTCTATGCTGAACTCCCTGATGGTACAGTCCTATCACATTTAATTGAGGAGAGCGAGAAATTCCTACCCCAATTTGGACGTGAGGTTATGGCAGGTTTATTGAACAAGGCTGACAGGGCTGATTGGAGGAAGTGTACAGATAGCAAAGAAGAGGAAACGAAGATGGTAGAAAAATTCAAGAGTAGATTCGAAGAATTTGATCCAAATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CwfJ_C_1 CwfJ_C_2 zf-CCCH

Protein Analysis

599

Amino Acids

66.45

Weight (kDa)

7.2

Isoelectric Point (pI)

48.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_DUS3L	PF25585	307 - 333	2.1e-06	DUS3L CCCH zinc finger domain
CwfJ_C_1	PF04677	375 - 492	4.6e-37	Protein similar to CwfJ C-terminal
CwfJ_C_2	PF04676	509 - 595	2.4e-20	Protein similar to CwfJ C-terminus 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007131)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56900 AT5G56900 AT5G56900
fragaria_vesca	FvH4_1g07540 FvH4_1g07540 FvH4_1g07540
malus_domestica	MD02G1080200.v1.1 MD15G1207600.v1.1
prunus_persica	Prupe.7G209200_v2.0.a1
pyrus_communis	pycom02g06370 pycom15g18400
rosa_chinensis	RchiOBHm_Chr2g0093421
rosa_laevigata	RLG00000016398
rosa_multiflora	Rmu_sc0004881.1_g000009 Rmu_sc0021911.1_g000011
rosa_roxburghii	Rroxscaffold_2G00148120
rosa_rugosa	Rorug02G0035700
rosa_samantha	Rh2AG081700 Rh2AG082300 Rh2BG083100 Rh2CG085100 Rh2DG080700 Rh2DG080800 Rh2DG081300
rosa_wichuraiana	Rw2G006490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1359
AasI	GACNNNNNNGTC	1 cut(s)	221
Acc36I	ACCTGC	1 cut(s)	1667
AccB1I	GGYRCC	2 cut(s)	227, 590
AccI	GTMKAC	1 cut(s)	1145
AccII	CGCG	1 cut(s)	104
AciI	CCGC	4 cut(s)	27, 140, 249, 652
AclI	AACGTT	1 cut(s)	1405
AclWI	GGATC	3 cut(s)	446, 459, 1778
AcoI	YGGCCR	3 cut(s)	87, 118, 246
AcuI	CTGAAG	1 cut(s)	1409
AcvI	CACGTG	1 cut(s)	614
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	4 cut(s)	866, 1063, 1609, 1720
AfiI	CCNNNNNNNGG	5 cut(s)	136, 151, 348, 891, 1658
AflIII	ACRYGT	2 cut(s)	102, 786
AgeI	ACCGGT	1 cut(s)	161
AhdI	GACNNNNNGTC	1 cut(s)	411
AjiI	CACGTC	1 cut(s)	1664
AjnI	CCWGG	3 cut(s)	454, 1139, 1335
AjuI	GAANNNNNNNTTGG	2 cut(s)	587, 619
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	5 cut(s)	40, 783, 886, 1114, 1191
Alw44I	GTGCAC	1 cut(s)	1224
AlwI	GGATC	3 cut(s)	446, 459, 1778
Ama87I	CYCGRG	1 cut(s)	149
AoxI	GGCC	6 cut(s)	87, 118, 175, 180, 246, 1237
ApaLI	GTGCAC	1 cut(s)	1224
ApeKI	GCWGC	3 cut(s)	488, 1454, 1484
AsiGI	ACCGGT	1 cut(s)	161
Asp700I	GAANNNNTTC	1 cut(s)	56
AspLEI	GCGC	1 cut(s)	709
AspS9I	GGNCC	5 cut(s)	92, 142, 180, 1238, 1557
AsuC2I	CCSGG	4 cut(s)	179, 184, 265, 510
AsuHPI	GGTGA	6 cut(s)	151, 331, 640, 753, 1112, 1275
AsuII	TTCGAA	2 cut(s)	1497, 1773
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	3 cut(s)	92, 142, 1557
BaeGI	GKGCMC	1 cut(s)	1228
BaeI	ACNNNNGTAYC	2 cut(s)	560, 593
BamHI	GGATCC	1 cut(s)	451
BanI	GGYRCC	2 cut(s)	227, 590
BauI	CACGAG	1 cut(s)	960
BbrPI	CACGTG	1 cut(s)	614
BbsI	GAAGAC	1 cut(s)	1257
Bbv12I	GWGCWC	1 cut(s)	1228
BbvCI	CCTCAGC	1 cut(s)	447
BbvI	GCAGC	3 cut(s)	500, 1466, 1471
BccI	CCATC	6 cut(s)	908, 1334, 1450, 1532, 1598, 1741
BciT130I	CCWGG	3 cut(s)	456, 1141, 1337
BciVI	GTATCC	1 cut(s)	952
BcnI	CCSGG	4 cut(s)	179, 184, 265, 510
BcoDI	GTCTC	5 cut(s)	40, 783, 886, 1114, 1191
BfaI	CTAG	2 cut(s)	834, 1458
BfuAI	ACCTGC	1 cut(s)	1667
BfuI	GTATCC	1 cut(s)	952
BisI	GCNGC	5 cut(s)	28, 249, 489, 1455, 1485
BlsI	GCNGC	5 cut(s)	29, 250, 490, 1456, 1486
BmcAI	AGTACT	1 cut(s)	866
Bme1390I	CCNGG	7 cut(s)	179, 184, 265, 456, 510, 1141, 1337
Bme18I	GGWCC	3 cut(s)	92, 142, 1557
BmeRI	GACNNNNNGTC	1 cut(s)	411
BmeT110I	CYCGRG	1 cut(s)	149
BmgBI	CACGTC	1 cut(s)	1664
BmgT120I	GGNCC	5 cut(s)	92, 142, 180, 1238, 1557
BmiI	GGNNCC	7 cut(s)	6, 229, 269, 453, 514, 592, 1559
BmrFI	CCNGG	7 cut(s)	179, 184, 265, 456, 510, 1141, 1337
BmrI	ACTGGG	1 cut(s)	1555
BmsI	GCATC	4 cut(s)	418, 625, 734, 985
BmuI	ACTGGG	1 cut(s)	1555
BpiI	GAAGAC	1 cut(s)	1257
BplI	GAGNNNNNCTC	2 cut(s)	608, 640
BpmI	CTGGAG	4 cut(s)	654, 705, 889, 930
Bpu10I	CCTNAGC	2 cut(s)	447, 1204
Bpu14I	TTCGAA	2 cut(s)	1497, 1773
BpuEI	CTTGAG	1 cut(s)	32
BpuMI	CCSGG	4 cut(s)	179, 184, 265, 510
BsaAI	YACGTR	3 cut(s)	614, 787, 1258
BsaHI	GRCGYC	1 cut(s)	222
BsaJI	CCNNGG	5 cut(s)	255, 271, 346, 455, 572
BsaWI	WCCGGW	3 cut(s)	161, 371, 947
BsaXI	ACNNNNNCTCC	6 cut(s)	763, 793, 1142, 1172, 1702, 1732
Bsc4I	CCNNNNNNNGG	5 cut(s)	136, 151, 348, 891, 1658
Bse118I	RCCGGY	2 cut(s)	89, 161
Bse1I	ACTGG	6 cut(s)	121, 320, 671, 872, 1132, 1561
BseBI	CCWGG	3 cut(s)	456, 1141, 1337
BseDI	CCNNGG	5 cut(s)	255, 271, 346, 455, 572
BseGI	GGATG	4 cut(s)	424, 1000, 1099, 1345
BseLI	CCNNNNNNNGG	5 cut(s)	136, 151, 348, 891, 1658
BseMII	CTCAG	3 cut(s)	438, 510, 552
BseNI	ACTGG	6 cut(s)	121, 320, 671, 872, 1132, 1561
BseRI	GAGGAG	2 cut(s)	167, 1646
BseSI	GKGCMC	1 cut(s)	1228
BseX3I	CGGCCG	1 cut(s)	87
BseXI	GCAGC	3 cut(s)	500, 1466, 1471
Bsh1236I	CGCG	1 cut(s)	104
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1239
BshNI	GGYRCC	2 cut(s)	227, 590
BshTI	ACCGGT	1 cut(s)	161
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	9 cut(s)	39, 90, 162, 178, 183, 264, 372, 510, 948
BslFI	GGGAC	1 cut(s)	418
BslI	CCNNNNNNNGG	5 cut(s)	136, 151, 348, 891, 1658
BsmAI	GTCTC	5 cut(s)	40, 783, 886, 1114, 1191
BsmBI	CGTCTC	1 cut(s)	1114
BsmFI	GGGAC	1 cut(s)	418
BsmI	GAATGC	2 cut(s)	1279, 1316
BsnI	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1239
BsoBI	CYCGRG	1 cut(s)	149
Bsp119I	TTCGAA	2 cut(s)	1497, 1773
Bsp1286I	GDGCHC	1 cut(s)	1228
Bsp1407I	TGTACA	1 cut(s)	1718
Bsp143I	GATC	3 cut(s)	451, 564, 1783
BspACI	CCGC	4 cut(s)	27, 140, 249, 652
BspANI	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1239
BspCNI	CTCAG	3 cut(s)	439, 511, 553
BspFNI	CGCG	1 cut(s)	104
BspLI	GGNNCC	7 cut(s)	6, 229, 269, 453, 514, 592, 1559
BspMI	ACCTGC	1 cut(s)	1667
BspPI	GGATC	3 cut(s)	446, 459, 1778
BspQI	GCTCTTC	1 cut(s)	62
BspT104I	TTCGAA	2 cut(s)	1497, 1773
BspT107I	GGYRCC	2 cut(s)	227, 590
BsrFI	RCCGGY	2 cut(s)	89, 161
BsrGI	TGTACA	1 cut(s)	1718
BsrI	ACTGG	6 cut(s)	121, 320, 671, 872, 1132, 1561
BssAI	RCCGGY	2 cut(s)	89, 161
BssECI	CCNNGG	5 cut(s)	255, 271, 346, 455, 572
BssMI	GATC	3 cut(s)	451, 564, 1783
BssNI	GRCGYC	1 cut(s)	222
BssSI	CACGAG	1 cut(s)	960
BssT1I	CCWWGG	2 cut(s)	255, 271
Bst2BI	CACGAG	1 cut(s)	960
Bst2UI	CCWGG	3 cut(s)	456, 1141, 1337
Bst4CI	ACNGT	8 cut(s)	399, 413, 544, 576, 864, 1223, 1532, 1612
Bst6I	CTCTTC	2 cut(s)	62, 1728
BstACI	GRCGYC	1 cut(s)	222
BstAUI	TGTACA	1 cut(s)	1718
BstBAI	YACGTR	3 cut(s)	614, 787, 1258
BstBI	TTCGAA	2 cut(s)	1497, 1773
BstC8I	GCNNGC	2 cut(s)	438, 589
BstDEI	CTNAG	6 cut(s)	234, 447, 519, 561, 1204, 1480
BstDSI	CCRYGG	2 cut(s)	346, 572
BstF5I	GGATG	4 cut(s)	424, 1000, 1099, 1345
BstFNI	CGCG	1 cut(s)	104
BstHHI	GCGC	1 cut(s)	709
BstKTI	GATC	3 cut(s)	454, 567, 1786
BstMAI	GTCTC	5 cut(s)	40, 783, 886, 1114, 1191
BstMBI	GATC	3 cut(s)	451, 564, 1783
BstMCI	CGRYCG	1 cut(s)	90
BstMWI	GCNNNNNNNGC	5 cut(s)	219, 437, 597, 1454, 1700
BstNI	CCWGG	3 cut(s)	456, 1141, 1337
BstSCI	CCNGG	7 cut(s)	177, 182, 263, 454, 508, 1139, 1335
BstSLI	GKGCMC	1 cut(s)	1228
BstUI	CGCG	1 cut(s)	104
BstV1I	GCAGC	3 cut(s)	500, 1466, 1471
BstV2I	GAAGAC	1 cut(s)	1257
BstX2I	RGATCY	1 cut(s)	451
BstYI	RGATCY	1 cut(s)	451
BstZI	CGGCCG	1 cut(s)	87
BsuI	GTATCC	1 cut(s)	952
BsuRI	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1239
BtgI	CCRYGG	2 cut(s)	346, 572
BtgZI	GCGATG	1 cut(s)	45
BtrI	CACGTC	1 cut(s)	1664
BtsCI	GGATG	4 cut(s)	424, 1000, 1099, 1345
BtsI	GCAGTG	2 cut(s)	334, 431
BtsIMutI	CAGTG	4 cut(s)	334, 431, 531, 1125
BveI	ACCTGC	1 cut(s)	1667
Cac8I	GCNNGC	2 cut(s)	438, 589
CfoI	GCGC	1 cut(s)	709
Cfr10I	RCCGGY	2 cut(s)	89, 161
Cfr13I	GGNCC	5 cut(s)	92, 142, 180, 1238, 1557
CpoI	CGGWCCG	1 cut(s)	92
CseI	GACGC	4 cut(s)	103, 110, 211, 1131
CsiI	ACCWGGT	1 cut(s)	1139
Csp6I	GTAC	4 cut(s)	865, 1062, 1608, 1719
CspAI	ACCGGT	1 cut(s)	161
CspI	CGGWCCG	1 cut(s)	92
CviAII	CATG	5 cut(s)	704, 902, 986, 991, 1415
CviQI	GTAC	4 cut(s)	865, 1062, 1608, 1719
DdeI	CTNAG	6 cut(s)	234, 447, 519, 561, 1204, 1480
DpnI	GATC	3 cut(s)	453, 566, 1785
DpnII	GATC	3 cut(s)	451, 564, 1783
DrdI	GACNNNNNNGTC	1 cut(s)	221
DriI	GACNNNNNGTC	1 cut(s)	411
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	3 cut(s)	87, 118, 246
EagI	CGGCCG	1 cut(s)	87
Eam1104I	CTCTTC	2 cut(s)	62, 1728
Eam1105I	GACNNNNNGTC	1 cut(s)	411
EarI	CTCTTC	2 cut(s)	62, 1728
EciI	GGCGGA	1 cut(s)	155
EclXI	CGGCCG	1 cut(s)	87
Eco130I	CCWWGG	2 cut(s)	255, 271
Eco47I	GGWCC	3 cut(s)	92, 142, 1557
Eco52I	CGGCCG	1 cut(s)	87
Eco57I	CTGAAG	1 cut(s)	1409
Eco72I	CACGTG	1 cut(s)	614
Eco88I	CYCGRG	1 cut(s)	149
EcoO109I	RGGNCCY	1 cut(s)	1557
EcoRI	GAATTC	1 cut(s)	1499
EcoRII	CCWGG	3 cut(s)	454, 1139, 1335
EcoT14I	CCWWGG	2 cut(s)	255, 271
ErhI	CCWWGG	2 cut(s)	255, 271
Esp3I	CGTCTC	1 cut(s)	1114
FaeI	CATG	5 cut(s)	707, 905, 989, 994, 1418
FalI	AAGNNNNNCTT	8 cut(s)	41, 73, 227, 259, 1070, 1102, 1227, 1259
FaqI	GGGAC	1 cut(s)	418
FatI	CATG	5 cut(s)	703, 901, 985, 990, 1414
FauI	CCCGC	1 cut(s)	659
FblI	GTMKAC	1 cut(s)	1145
Fnu4HI	GCNGC	5 cut(s)	28, 249, 489, 1455, 1485
FokI	GGATG	4 cut(s)	431, 1007, 1106, 1352
Fsp4HI	GCNGC	5 cut(s)	28, 249, 489, 1455, 1485
FspBI	CTAG	2 cut(s)	834, 1458
GlaI	GCGC	1 cut(s)	708
GluI	GCNGC	5 cut(s)	28, 249, 489, 1455, 1485
GsuI	CTGGAG	4 cut(s)	654, 705, 889, 930
HaeIII	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1239
HapII	CCGG	9 cut(s)	39, 90, 162, 178, 183, 264, 372, 510, 948
HgaI	GACGC	4 cut(s)	103, 110, 211, 1131
HhaI	GCGC	1 cut(s)	709
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	5 cut(s)	707, 905, 989, 994, 1418
Hin6I	GCGC	1 cut(s)	707
HinP1I	GCGC	1 cut(s)	707
HincII	GTYRAC	3 cut(s)	79, 466, 1146
HindII	GTYRAC	3 cut(s)	79, 466, 1146
HinfI	GANTC	9 cut(s)	66, 134, 187, 260, 536, 851, 857, 1184, 1770
HpaII	CCGG	9 cut(s)	39, 90, 162, 178, 183, 264, 372, 510, 948
HphI	GGTGA	6 cut(s)	151, 331, 640, 753, 1112, 1275
Hpy166II	GTNNAC	7 cut(s)	79, 159, 466, 959, 1146, 1226, 1719
Hpy188I	TCNGA	7 cut(s)	388, 499, 520, 850, 856, 1309, 1537
Hpy188III	TCNNGA	5 cut(s)	49, 196, 416, 743, 1762
Hpy8I	GTNNAC	7 cut(s)	79, 159, 466, 959, 1146, 1226, 1719
Hpy99I	CGWCG	4 cut(s)	104, 119, 227, 1150
HpyAV	CCTTC	5 cut(s)	167, 289, 352, 812, 1091
HpyCH4III	ACNGT	8 cut(s)	399, 413, 544, 576, 864, 1223, 1532, 1612
HpyCH4IV	ACGT	5 cut(s)	613, 786, 1257, 1405, 1663
HpyF10VI	GCNNNNNNNGC	5 cut(s)	219, 437, 597, 1454, 1700
HpyF3I	CTNAG	6 cut(s)	234, 447, 519, 561, 1204, 1480
HpySE526I	ACGT	5 cut(s)	613, 786, 1257, 1405, 1663
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	5 cut(s)	707, 905, 989, 994, 1418
HspAI	GCGC	1 cut(s)	707
Kzo9I	GATC	3 cut(s)	451, 564, 1783
LguI	GCTCTTC	1 cut(s)	62
LmnI	GCTCC	6 cut(s)	10, 512, 673, 905, 1178, 1210
Lsp1109I	GCAGC	3 cut(s)	500, 1466, 1471
LweI	GCATC	4 cut(s)	418, 625, 734, 985
MabI	ACCWGGT	1 cut(s)	1139
MaeI	CTAG	2 cut(s)	834, 1458
MaeII	ACGT	5 cut(s)	613, 786, 1257, 1405, 1663
MaeIII	GTNAC	3 cut(s)	164, 475, 1526
MalI	GATC	3 cut(s)	453, 566, 1785
MboI	GATC	3 cut(s)	451, 564, 1783
MfeI	CAATTG	1 cut(s)	441
MflI	RGATCY	1 cut(s)	451
MhlI	GDGCHC	1 cut(s)	1228
MluI	ACGCGT	1 cut(s)	102
MlyI	GAGTC	5 cut(s)	75, 128, 254, 530, 1193
MmeI	TCCRAC	1 cut(s)	655
MroXI	GAANNNNTTC	1 cut(s)	56
MseI	TTAA	5 cut(s)	750, 933, 1077, 1347, 1625
MspI	CCGG	9 cut(s)	39, 90, 162, 178, 183, 264, 372, 510, 948
MspR9I	CCNGG	7 cut(s)	179, 184, 265, 456, 510, 1141, 1337
MunI	CAATTG	1 cut(s)	441
Mva1269I	GAATGC	2 cut(s)	1279, 1316
MvaI	CCWGG	3 cut(s)	456, 1141, 1337
MvnI	CGCG	1 cut(s)	104
MwoI	GCNNNNNNNGC	5 cut(s)	219, 437, 597, 1454, 1700
NciI	CCSGG	4 cut(s)	179, 184, 265, 510
NdeII	GATC	3 cut(s)	451, 564, 1783
NlaIII	CATG	5 cut(s)	707, 905, 989, 994, 1418
NlaIV	GGNNCC	7 cut(s)	6, 229, 269, 453, 514, 592, 1559
NmeAIII	GCCGAG	1 cut(s)	116
NspV	TTCGAA	2 cut(s)	1497, 1773
PaeR7I	CTCGAG	1 cut(s)	149
PciSI	GCTCTTC	1 cut(s)	62
PcsI	WCGNNNNNNNCGW	2 cut(s)	92, 792
PctI	GAATGC	2 cut(s)	1279, 1316
PdmI	GAANNNNTTC	1 cut(s)	56
PfeI	GAWTC	4 cut(s)	187, 851, 857, 1770
PfoI	TCCNGGA	3 cut(s)	263, 508, 1335
PinAI	ACCGGT	1 cut(s)	161
PkrI	GCNGC	5 cut(s)	29, 250, 490, 1456, 1486
PleI	GAGTC	5 cut(s)	74, 128, 254, 530, 1192
PmaCI	CACGTG	1 cut(s)	614
PmlI	CACGTG	1 cut(s)	614
PpsI	GAGTC	5 cut(s)	74, 128, 254, 530, 1192
Ppu21I	YACGTR	3 cut(s)	614, 787, 1258
PpuMI	RGGWCCY	1 cut(s)	1557
PsiI	TTATAA	1 cut(s)	1359
Psp1406I	AACGTT	1 cut(s)	1405
Psp5II	RGGWCCY	1 cut(s)	1557
Psp6I	CCWGG	3 cut(s)	454, 1139, 1335
PspCI	CACGTG	1 cut(s)	614
PspGI	CCWGG	3 cut(s)	454, 1139, 1335
PspN4I	GGNNCC	7 cut(s)	6, 229, 269, 453, 514, 592, 1559
PspPI	GGNCC	5 cut(s)	92, 142, 180, 1238, 1557
PspPPI	RGGWCCY	1 cut(s)	1557
PspXI	VCTCGAGB	1 cut(s)	149
PsuI	RGATCY	1 cut(s)	451
RsaI	GTAC	4 cut(s)	866, 1063, 1609, 1720
RsaNI	GTAC	4 cut(s)	865, 1062, 1608, 1719
Rsr2I	CGGWCCG	1 cut(s)	92
RsrII	CGGWCCG	1 cut(s)	92
SalI	GTCGAC	1 cut(s)	1144
SapI	GCTCTTC	1 cut(s)	62
SaqAI	TTAA	5 cut(s)	750, 933, 1077, 1347, 1625
SatI	GCNGC	5 cut(s)	28, 249, 489, 1455, 1485
Sau3AI	GATC	3 cut(s)	451, 564, 1783
Sau96I	GGNCC	5 cut(s)	92, 142, 180, 1238, 1557
ScaI	AGTACT	1 cut(s)	866
SchI	GAGTC	5 cut(s)	75, 128, 254, 530, 1193
ScrFI	CCNGG	7 cut(s)	179, 184, 265, 456, 510, 1141, 1337
SduI	GDGCHC	1 cut(s)	1228
SexAI	ACCWGGT	1 cut(s)	1139
SfaNI	GCATC	4 cut(s)	418, 625, 734, 985
Sfr274I	CTCGAG	1 cut(s)	149
SfuI	TTCGAA	2 cut(s)	1497, 1773
SinI	GGWCC	3 cut(s)	92, 142, 1557
SlaI	CTCGAG	1 cut(s)	149
SmlI	CTYRAG	2 cut(s)	47, 149
SmoI	CTYRAG	2 cut(s)	47, 149
SsiI	CCGC	4 cut(s)	27, 140, 249, 652
SspMI	CTAG	2 cut(s)	834, 1458
StyD4I	CCNGG	7 cut(s)	177, 182, 263, 454, 508, 1139, 1335
StyI	CCWWGG	2 cut(s)	255, 271
TaaI	ACNGT	8 cut(s)	399, 413, 544, 576, 864, 1223, 1532, 1612
TaiI	ACGT	5 cut(s)	616, 789, 1260, 1408, 1666
TaqI	TCGA	9 cut(s)	99, 150, 171, 633, 795, 1029, 1145, 1497, 1773
TaqII	GACCGA	1 cut(s)	64
TatI	WGTACW	2 cut(s)	864, 1718
TauI	GCSGC	2 cut(s)	30, 251
TfiI	GAWTC	4 cut(s)	187, 851, 857, 1770
Tru1I	TTAA	5 cut(s)	750, 933, 1077, 1347, 1625
Tru9I	TTAA	5 cut(s)	750, 933, 1077, 1347, 1625
TscAI	CASTG	4 cut(s)	334, 438, 538, 1132
TseI	GCWGC	3 cut(s)	488, 1454, 1484
TspDTI	ATGAA	5 cut(s)	196, 646, 692, 1052, 1110
TspGWI	ACGGA	2 cut(s)	84, 1163
TspRI	CASTG	4 cut(s)	334, 438, 538, 1132
VneI	GTGCAC	1 cut(s)	1224
VpaK11BI	GGWCC	3 cut(s)	92, 142, 1557
XhoI	CTCGAG	1 cut(s)	149
XmiI	GTMKAC	1 cut(s)	1145
XmnI	GAANNNNTTC	1 cut(s)	56
XspI	CTAG	2 cut(s)	834, 1458
ZrmI	AGTACT	1 cut(s)	866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.