Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0007131

Physical Location & Seq

Genomic Coordinates Reverse (-)

6441403 .. 6445372

Gene Structure 3970 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG083100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGCTCCTCCCAAAATCTTACTCTGCGGCGACGTCTCCGGCAACCTCAAGCAGCTCTTCAAACGAGTCGTCTCGGTCAACAAATCGGCCGGTCCCTTCGACGCGTTGTTCTGCGTCGGCCAGTTCTTTCCCGACTCGGCGGACCAGCTCGACGAGTTCACCGGTTACATCGAAGGCCGGGCCGAGATTCCTCTCCCGACCTACTTCATCGGCGACTATGGCGTCGGCGCCACTAAGTTTCTATTGGCGGCAACCAAGGACTCGGAGAACCAAGGCTTCAAAATGGACGGCTTGAAGGTTTGCAACAATCTCTACTGGCTGAAAGGCAGTGGCAAATTCACCTTCCACGGGTTATCGGTGGTGTATTTGTCTGGTCTGCAATCTTCTGATAGTCAACAGTTTGGGACTTACAGTCAGGATGATGTTGATGCATTGCGAGCAATTGCTGAAGATCCTGGGATCGTTGACTTGTTCCTAACTAACAAATGGCCAAGTGGGGTTACAAATAAAGCAGGTACATCTGATGTTCCTCCTGGAGCCTCTGAGCCTTTTGGCACTGACTCTACTGTGGCAGAGTTAGCAGCCGAGATCAAACCACGCTATCATGTTGCAGGCACAAAAGGCATGTTCTATGCACGTGAGCCTTACTCCAATGTCGATGCTGTGCATGTCACCCGCTTCATAGGTCTTGCTCCAGTTGGAAACAAAGACAAGCAGAAATTTCTTCATGCGCTTTCTCCTACTCCAGCATCTACTATGTCTGCTCTTGAAATTAAGACAAAATCGCCAAACACTACCTTGTCTCCATACATGTATATCGAGGGAACAGCTAATGCGAAAGAAGGTGCAAAGAGGTCTAGTGATAGTGTTTCTGATTCTGATTCACAGTACTGGAGATATGATGTCTCCCAAAAAAGGCAGAAACATGGAGCTGGAGATGGTAATAGGCTGTGCTTTAAATTTGTATCCTCCGGTTCTTGTCCACGAGGGGAAACTTGCAACTTTCAACATGACATGGATGCAAGAGAACAATCTTTGAGAGGTGTTTGCTTTGATTTTATGAACAAAGGAAAGTGTGAAAGGGGTACTGATTGCAAATTTAAGCACAGCTTACAGGATGAAGGTGAAAGCAATTCTCACAAAAGACGCACTGGAAATGCTACCAGGTCGACAGAGTGCTGGTTTTGTTTGTCAAGCTCCAAAATAGAGTCTCATCTATTTATCAGCTTAGGGGAGCATTACTACTGTGCACTTGCTAAAGGCCCACTTGTTGAAGACCACGTATTGCTAATCCCTATTGGGCATTCACCCAATACCCTTTCTCTACCCTCCGAATGTGAGATGGAGCTTGGTAAATTCCAGGATAGTCTTAAAAAGTTTTATAAGAAACAAGACAAGGAAGTAGTTTTCTTTGAGTGGGCTTCAAAACGTTCAACTCATGCCAATCTTCAGGTAAGGATCTATGTTGCAAATGTTTATAAAGTAGTTTTCTGCGTTGATCAGTTACAGTATTGTTCTTTTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CwfJ_C_1 CwfJ_C_2 zf-CCCH

Protein Analysis

508

Amino Acids

56.21

Weight (kDa)

7.16

Isoelectric Point (pI)

46.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_DUS3L	PF25585	315 - 341	1.8e-06	DUS3L CCCH zinc finger domain
CwfJ_C_1	PF04677	383 - 485	4.5e-33	Protein similar to CwfJ C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007131)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56900 AT5G56900 AT5G56900
fragaria_vesca	FvH4_1g07540 FvH4_1g07540 FvH4_1g07540
malus_domestica	MD02G1080200.v1.1 MD15G1207600.v1.1
prunus_persica	Prupe.7G209200_v2.0.a1
pyrus_communis	pycom02g06370 pycom15g18400
rosa_chinensis	RchiOBHm_Chr2g0093421
rosa_laevigata	RLG00000016398
rosa_multiflora	Rmu_sc0004881.1_g000009 Rmu_sc0021911.1_g000011
rosa_roxburghii	Rroxscaffold_2G00148120
rosa_rugosa	Rorug02G0035700
rosa_samantha	Rh2AG081700 Rh2AG082300 Rh2BG083100 Rh2CG085100 Rh2DG080700 Rh2DG080800 Rh2DG081300
rosa_wichuraiana	Rw2G006490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1383, 1479
AasI	GACNNNNNNGTC	1 cut(s)	221
AatII	GACGTC	1 cut(s)	36
Acc36I	ACCTGC	1 cut(s)	503
AccB1I	GGYRCC	1 cut(s)	227
AccI	GTMKAC	1 cut(s)	1169
AccII	CGCG	1 cut(s)	104
AciI	CCGC	4 cut(s)	27, 140, 248, 676
AclI	AACGTT	1 cut(s)	1429
AclWI	GGATC	3 cut(s)	446, 467, 1466
AcoI	YGGCCR	3 cut(s)	87, 118, 488
AcsI	RAATTY	5 cut(s)	335, 719, 959, 1097, 1355
AcuI	CTGAAG	2 cut(s)	468, 1433
AcvI	CACGTG	1 cut(s)	638
AcyI	GRCGYC	3 cut(s)	33, 222, 228
AfaI	GTAC	3 cut(s)	517, 890, 1087
AfiI	CCNNNNNNNGG	2 cut(s)	348, 915
AflIII	ACRYGT	2 cut(s)	102, 810
AgeI	ACCGGT	1 cut(s)	161
AgsI	TTSAA	8 cut(s)	61, 280, 295, 770, 1007, 1274, 1425, 1434
AhdI	GACNNNNNGTC	1 cut(s)	411
AjnI	CCWGG	4 cut(s)	454, 532, 1163, 1359
AluBI	AGCT	8 cut(s)	55, 148, 830, 932, 1110, 1197, 1227, 1348
AluI	AGCT	8 cut(s)	55, 148, 830, 932, 1110, 1197, 1227, 1348
Alw21I	GWGCWC	1 cut(s)	1252
Alw26I	GTCTC	5 cut(s)	40, 76, 807, 910, 1215
Alw44I	GTGCAC	1 cut(s)	1248
AlwI	GGATC	3 cut(s)	446, 467, 1466
AoxI	GGCC	6 cut(s)	87, 118, 175, 180, 488, 1261
ApaLI	GTGCAC	1 cut(s)	1248
ApeKI	GCWGC	2 cut(s)	52, 581
ApoI	RAATTY	5 cut(s)	335, 719, 959, 1097, 1355
ArsI	GACNNNNNNTTYG	2 cut(s)	54, 86
AsiGI	ACCGGT	1 cut(s)	161
AspLEI	GCGC	2 cut(s)	230, 733
AspS9I	GGNCC	4 cut(s)	92, 142, 180, 1262
AsuC2I	CCSGG	1 cut(s)	179
AsuHPI	GGTGA	5 cut(s)	151, 331, 664, 1136, 1299
AvaII	GGWCC	2 cut(s)	92, 142
BaeGI	GKGCMC	1 cut(s)	1252
BalI	TGGCCA	1 cut(s)	490
BanI	GGYRCC	1 cut(s)	227
BauI	CACGAG	1 cut(s)	984
BbrPI	CACGTG	1 cut(s)	638
BbsI	GAAGAC	1 cut(s)	1281
Bbv12I	GWGCWC	1 cut(s)	1252
BbvI	GCAGC	2 cut(s)	64, 593
BccI	CCATC	2 cut(s)	932, 1336
BceAI	ACGGC	1 cut(s)	304
BciT130I	CCWGG	4 cut(s)	456, 534, 1165, 1361
BciVI	GTATCC	1 cut(s)	976
BclI	TGATCA	1 cut(s)	1498
BcnI	CCSGG	1 cut(s)	179
BcoDI	GTCTC	5 cut(s)	40, 76, 807, 910, 1215
BfaI	CTAG	1 cut(s)	858
BfoI	RGCGCY	1 cut(s)	231
BfuAI	ACCTGC	1 cut(s)	503
BfuI	GTATCC	1 cut(s)	976
BisI	GCNGC	4 cut(s)	28, 53, 249, 582
BlsI	GCNGC	4 cut(s)	29, 54, 250, 583
BmcAI	AGTACT	1 cut(s)	890
Bme1390I	CCNGG	5 cut(s)	179, 456, 534, 1165, 1361
Bme18I	GGWCC	2 cut(s)	92, 142
BmeRI	GACNNNNNGTC	1 cut(s)	411
BmgT120I	GGNCC	4 cut(s)	92, 142, 180, 1262
BmiI	GGNNCC	4 cut(s)	6, 94, 229, 538
BmrFI	CCNGG	5 cut(s)	179, 456, 534, 1165, 1361
BmsI	GCATC	4 cut(s)	418, 649, 758, 1009
BpiI	GAAGAC	1 cut(s)	1281
BplI	GAGNNNNNCTC	2 cut(s)	632, 664
BpmI	CTGGAG	5 cut(s)	555, 678, 729, 913, 954
Bpu10I	CCTNAGC	1 cut(s)	1228
BpuEI	CTTGAG	1 cut(s)	32
BpuMI	CCSGG	1 cut(s)	179
BsaAI	YACGTR	2 cut(s)	638, 1282
BsaHI	GRCGYC	3 cut(s)	33, 222, 228
BsaJI	CCNNGG	4 cut(s)	255, 271, 346, 455
BsaWI	WCCGGW	2 cut(s)	161, 971
BsaXI	ACNNNNNCTCC	2 cut(s)	787, 817
Bsc4I	CCNNNNNNNGG	2 cut(s)	348, 915
Bse118I	RCCGGY	2 cut(s)	89, 161
Bse1I	ACTGG	5 cut(s)	121, 320, 695, 896, 1156
Bse3DI	GCAATG	1 cut(s)	431
BseBI	CCWGG	4 cut(s)	456, 534, 1165, 1361
BseDI	CCNNGG	4 cut(s)	255, 271, 346, 455
BseGI	GGATG	3 cut(s)	424, 1024, 1123
BseLI	CCNNNNNNNGG	2 cut(s)	348, 915
BseMI	GCAATG	1 cut(s)	431
BseMII	CTCAG	1 cut(s)	534
BseNI	ACTGG	5 cut(s)	121, 320, 695, 896, 1156
BseSI	GKGCMC	1 cut(s)	1252
BseX3I	CGGCCG	1 cut(s)	87
BseXI	GCAGC	2 cut(s)	64, 593
Bsh1236I	CGCG	1 cut(s)	104
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	6 cut(s)	89, 120, 177, 182, 490, 1263
BshNI	GGYRCC	1 cut(s)	227
BshTI	ACCGGT	1 cut(s)	161
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	1 cut(s)	1252
BsiSI	CCGG	5 cut(s)	39, 90, 162, 178, 972
BslFI	GGGAC	2 cut(s)	78, 418
BslI	CCNNNNNNNGG	2 cut(s)	348, 915
BsmAI	GTCTC	5 cut(s)	40, 76, 807, 910, 1215
BsmBI	CGTCTC	2 cut(s)	40, 76
BsmFI	GGGAC	2 cut(s)	78, 418
BsmI	GAATGC	1 cut(s)	1303
BsnI	GGCC	6 cut(s)	89, 120, 177, 182, 490, 1263
Bsp1286I	GDGCHC	1 cut(s)	1252
Bsp143I	GATC	5 cut(s)	451, 459, 588, 1458, 1498
BspACI	CCGC	4 cut(s)	27, 140, 248, 676
BspANI	GGCC	6 cut(s)	89, 120, 177, 182, 490, 1263
BspCNI	CTCAG	1 cut(s)	535
BspFNI	CGCG	1 cut(s)	104
BspLI	GGNNCC	4 cut(s)	6, 94, 229, 538
BspMI	ACCTGC	1 cut(s)	503
BspPI	GGATC	3 cut(s)	446, 467, 1466
BspQI	GCTCTTC	1 cut(s)	62
BspT107I	GGYRCC	1 cut(s)	227
BsrDI	GCAATG	1 cut(s)	431
BsrFI	RCCGGY	2 cut(s)	89, 161
BsrI	ACTGG	5 cut(s)	121, 320, 695, 896, 1156
BssAI	RCCGGY	2 cut(s)	89, 161
BssECI	CCNNGG	4 cut(s)	255, 271, 346, 455
BssMI	GATC	5 cut(s)	451, 459, 588, 1458, 1498
BssNI	GRCGYC	3 cut(s)	33, 222, 228
BssSI	CACGAG	1 cut(s)	984
BssT1I	CCWWGG	2 cut(s)	255, 271
Bst2BI	CACGAG	1 cut(s)	984
Bst2UI	CCWGG	4 cut(s)	456, 534, 1165, 1361
Bst4CI	ACNGT	6 cut(s)	399, 413, 568, 888, 1247, 1509
Bst6I	CTCTTC	1 cut(s)	62
BstACI	GRCGYC	3 cut(s)	33, 222, 228
BstBAI	YACGTR	2 cut(s)	638, 1282
BstC8I	GCNNGC	2 cut(s)	438, 613
BstDEI	CTNAG	3 cut(s)	234, 543, 1228
BstDSI	CCRYGG	1 cut(s)	346
BstF5I	GGATG	3 cut(s)	424, 1024, 1123
BstFNI	CGCG	1 cut(s)	104
BstH2I	RGCGCY	1 cut(s)	231
BstHHI	GCGC	2 cut(s)	230, 733
BstKTI	GATC	5 cut(s)	454, 462, 591, 1461, 1501
BstMAI	GTCTC	5 cut(s)	40, 76, 807, 910, 1215
BstMBI	GATC	5 cut(s)	451, 459, 588, 1458, 1498
BstMCI	CGRYCG	1 cut(s)	90
BstMWI	GCNNNNNNNGC	4 cut(s)	219, 437, 578, 621
BstNI	CCWGG	4 cut(s)	456, 534, 1165, 1361
BstNSI	RCATGY	3 cut(s)	628, 671, 814
BstSCI	CCNGG	5 cut(s)	177, 454, 532, 1163, 1359
BstSLI	GKGCMC	1 cut(s)	1252
BstUI	CGCG	1 cut(s)	104
BstV1I	GCAGC	2 cut(s)	64, 593
BstV2I	GAAGAC	1 cut(s)	1281
BstX2I	RGATCY	2 cut(s)	451, 1458
BstYI	RGATCY	2 cut(s)	451, 1458
BstZI	CGGCCG	1 cut(s)	87
BsuI	GTATCC	1 cut(s)	976
BsuRI	GGCC	6 cut(s)	89, 120, 177, 182, 490, 1263
BtgI	CCRYGG	1 cut(s)	346
BtsCI	GGATG	3 cut(s)	424, 1024, 1123
BtsI	GCAGTG	1 cut(s)	334
BtsIMutI	CAGTG	3 cut(s)	334, 555, 1149
BveI	ACCTGC	1 cut(s)	503
Cac8I	GCNNGC	2 cut(s)	438, 613
CfoI	GCGC	2 cut(s)	230, 733
Cfr10I	RCCGGY	2 cut(s)	89, 161
Cfr13I	GGNCC	4 cut(s)	92, 142, 180, 1262
CseI	GACGC	4 cut(s)	103, 110, 211, 1155
CsiI	ACCWGGT	1 cut(s)	1163
Csp6I	GTAC	3 cut(s)	516, 889, 1086
CspAI	ACCGGT	1 cut(s)	161
CviAII	CATG	9 cut(s)	605, 625, 668, 728, 811, 926, 1010, 1015, 1439
CviQI	GTAC	3 cut(s)	516, 889, 1086
DdeI	CTNAG	3 cut(s)	234, 543, 1228
DinI	GGCGCC	1 cut(s)	229
DpnI	GATC	5 cut(s)	453, 461, 590, 1460, 1500
DpnII	GATC	5 cut(s)	451, 459, 588, 1458, 1498
DraI	TTTAAA	1 cut(s)	958
DrdI	GACNNNNNNGTC	1 cut(s)	221
DriI	GACNNNNNGTC	1 cut(s)	411
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	3 cut(s)	87, 118, 488
EagI	CGGCCG	1 cut(s)	87
Eam1104I	CTCTTC	1 cut(s)	62
Eam1105I	GACNNNNNGTC	1 cut(s)	411
EarI	CTCTTC	1 cut(s)	62
EciI	GGCGGA	1 cut(s)	155
EclXI	CGGCCG	1 cut(s)	87
Eco130I	CCWWGG	2 cut(s)	255, 271
Eco47I	GGWCC	2 cut(s)	92, 142
Eco52I	CGGCCG	1 cut(s)	87
Eco57I	CTGAAG	2 cut(s)	468, 1433
Eco72I	CACGTG	1 cut(s)	638
EcoRII	CCWGG	4 cut(s)	454, 532, 1163, 1359
EcoT14I	CCWWGG	2 cut(s)	255, 271
EcoT22I	ATGCAT	1 cut(s)	433
EgeI	GGCGCC	1 cut(s)	229
EheI	GGCGCC	1 cut(s)	229
ErhI	CCWWGG	2 cut(s)	255, 271
Esp3I	CGTCTC	2 cut(s)	40, 76
FaeI	CATG	9 cut(s)	608, 628, 671, 731, 814, 929, 1013, 1018, 1442
FalI	AAGNNNNNCTT	6 cut(s)	41, 73, 1094, 1126, 1251, 1283
FaqI	GGGAC	2 cut(s)	78, 418
FatI	CATG	9 cut(s)	604, 624, 667, 727, 810, 925, 1009, 1014, 1438
FauI	CCCGC	1 cut(s)	683
FbaI	TGATCA	1 cut(s)	1498
FblI	GTMKAC	1 cut(s)	1169
Fnu4HI	GCNGC	4 cut(s)	28, 53, 249, 582
FokI	GGATG	3 cut(s)	431, 1031, 1130
Fsp4HI	GCNGC	4 cut(s)	28, 53, 249, 582
FspBI	CTAG	1 cut(s)	858
GlaI	GCGC	2 cut(s)	229, 732
GluI	GCNGC	4 cut(s)	28, 53, 249, 582
GsuI	CTGGAG	5 cut(s)	555, 678, 729, 913, 954
HaeII	RGCGCY	1 cut(s)	231
HaeIII	GGCC	6 cut(s)	89, 120, 177, 182, 490, 1263
HapII	CCGG	5 cut(s)	39, 90, 162, 178, 972
HgaI	GACGC	4 cut(s)	103, 110, 211, 1155
HhaI	GCGC	2 cut(s)	230, 733
Hin1I	GRCGYC	3 cut(s)	33, 222, 228
Hin1II	CATG	9 cut(s)	608, 628, 671, 731, 814, 929, 1013, 1018, 1442
Hin6I	GCGC	2 cut(s)	228, 731
HinP1I	GCGC	2 cut(s)	228, 731
HincII	GTYRAC	4 cut(s)	79, 395, 466, 1170
HindII	GTYRAC	4 cut(s)	79, 395, 466, 1170
HinfI	GANTC	8 cut(s)	66, 134, 187, 260, 560, 875, 881, 1208
HpaII	CCGG	5 cut(s)	39, 90, 162, 178, 972
HphI	GGTGA	5 cut(s)	151, 331, 664, 1136, 1299
Hpy166II	GTNNAC	7 cut(s)	79, 159, 395, 466, 983, 1170, 1250
Hpy188I	TCNGA	7 cut(s)	265, 388, 523, 544, 874, 880, 1333
Hpy188III	TCNNGA	4 cut(s)	131, 196, 416, 767
Hpy8I	GTNNAC	7 cut(s)	79, 159, 395, 466, 983, 1170, 1250
Hpy99I	CGWCG	5 cut(s)	35, 104, 119, 155, 227
HpyAV	CCTTC	6 cut(s)	106, 167, 289, 352, 836, 1115
HpyCH4III	ACNGT	6 cut(s)	399, 413, 568, 888, 1247, 1509
HpyCH4IV	ACGT	4 cut(s)	33, 637, 1281, 1429
HpyF10VI	GCNNNNNNNGC	4 cut(s)	219, 437, 578, 621
HpyF3I	CTNAG	3 cut(s)	234, 543, 1228
HpySE526I	ACGT	4 cut(s)	33, 637, 1281, 1429
Hsp92I	GRCGYC	3 cut(s)	33, 222, 228
Hsp92II	CATG	9 cut(s)	608, 628, 671, 731, 814, 929, 1013, 1018, 1442
HspAI	GCGC	2 cut(s)	228, 731
KasI	GGCGCC	1 cut(s)	227
Ksp22I	TGATCA	1 cut(s)	1498
Kzo9I	GATC	5 cut(s)	451, 459, 588, 1458, 1498
LguI	GCTCTTC	1 cut(s)	62
LmnI	GCTCC	7 cut(s)	10, 536, 697, 929, 1202, 1234, 1345
Lsp1109I	GCAGC	2 cut(s)	64, 593
LweI	GCATC	4 cut(s)	418, 649, 758, 1009
MabI	ACCWGGT	1 cut(s)	1163
MaeI	CTAG	1 cut(s)	858
MaeII	ACGT	4 cut(s)	33, 637, 1281, 1429
MaeIII	GTNAC	4 cut(s)	164, 499, 670, 1503
MalI	GATC	5 cut(s)	453, 461, 590, 1460, 1500
MboI	GATC	5 cut(s)	451, 459, 588, 1458, 1498
MboII	GAAGA	6 cut(s)	49, 375, 461, 716, 1286, 1439
MfeI	CAATTG	1 cut(s)	441
MflI	RGATCY	2 cut(s)	451, 1458
MhlI	GDGCHC	1 cut(s)	1252
MlsI	TGGCCA	1 cut(s)	490
MluCI	AATT	8 cut(s)	335, 441, 719, 771, 959, 1097, 1132, 1355
MluI	ACGCGT	1 cut(s)	102
MluNI	TGGCCA	1 cut(s)	490
Mly113I	GGCGCC	1 cut(s)	228
MlyI	GAGTC	5 cut(s)	75, 128, 254, 554, 1217
MmeI	TCCRAC	1 cut(s)	679
Mox20I	TGGCCA	1 cut(s)	490
Mph1103I	ATGCAT	1 cut(s)	433
MscI	TGGCCA	1 cut(s)	490
MseI	TTAA	4 cut(s)	774, 957, 1101, 1371
Msp20I	TGGCCA	1 cut(s)	490
MspI	CCGG	5 cut(s)	39, 90, 162, 178, 972
MspR9I	CCNGG	5 cut(s)	179, 456, 534, 1165, 1361
MunI	CAATTG	1 cut(s)	441
Mva1269I	GAATGC	1 cut(s)	1303
MvaI	CCWGG	4 cut(s)	456, 534, 1165, 1361
MvnI	CGCG	1 cut(s)	104
MwoI	GCNNNNNNNGC	4 cut(s)	219, 437, 578, 621
NarI	GGCGCC	1 cut(s)	228
NciI	CCSGG	1 cut(s)	179
NdeII	GATC	5 cut(s)	451, 459, 588, 1458, 1498
NlaIII	CATG	9 cut(s)	608, 628, 671, 731, 814, 929, 1013, 1018, 1442
NlaIV	GGNNCC	4 cut(s)	6, 94, 229, 538
NmeAIII	GCCGAG	3 cut(s)	116, 208, 610
NmuCI	GTSAC	1 cut(s)	670
NsiI	ATGCAT	1 cut(s)	433
NspI	RCATGY	3 cut(s)	628, 671, 814
PciI	ACATGT	1 cut(s)	810
PciSI	GCTCTTC	1 cut(s)	62
PctI	GAATGC	1 cut(s)	1303
PfeI	GAWTC	3 cut(s)	187, 875, 881
PfoI	TCCNGGA	2 cut(s)	532, 1359
PinAI	ACCGGT	1 cut(s)	161
PkrI	GCNGC	4 cut(s)	29, 54, 250, 583
PleI	GAGTC	5 cut(s)	74, 128, 254, 554, 1216
PluTI	GGCGCC	1 cut(s)	231
PmaCI	CACGTG	1 cut(s)	638
PmlI	CACGTG	1 cut(s)	638
PpsI	GAGTC	5 cut(s)	74, 128, 254, 554, 1216
Ppu21I	YACGTR	2 cut(s)	638, 1282
PscI	ACATGT	1 cut(s)	810
PsiI	TTATAA	2 cut(s)	1383, 1479
Psp1406I	AACGTT	1 cut(s)	1429
Psp6I	CCWGG	4 cut(s)	454, 532, 1163, 1359
PspCI	CACGTG	1 cut(s)	638
PspGI	CCWGG	4 cut(s)	454, 532, 1163, 1359
PspN4I	GGNNCC	4 cut(s)	6, 94, 229, 538
PspPI	GGNCC	4 cut(s)	92, 142, 180, 1262
PsuI	RGATCY	2 cut(s)	451, 1458
RsaI	GTAC	3 cut(s)	517, 890, 1087
RsaNI	GTAC	3 cut(s)	516, 889, 1086
SalI	GTCGAC	1 cut(s)	1168
SapI	GCTCTTC	1 cut(s)	62
SaqAI	TTAA	4 cut(s)	774, 957, 1101, 1371
SatI	GCNGC	4 cut(s)	28, 53, 249, 582
Sau3AI	GATC	5 cut(s)	451, 459, 588, 1458, 1498
Sau96I	GGNCC	4 cut(s)	92, 142, 180, 1262
ScaI	AGTACT	1 cut(s)	890
SchI	GAGTC	5 cut(s)	75, 128, 254, 554, 1217
ScrFI	CCNGG	5 cut(s)	179, 456, 534, 1165, 1361
SduI	GDGCHC	1 cut(s)	1252
SexAI	ACCWGGT	1 cut(s)	1163
SfaNI	GCATC	4 cut(s)	418, 649, 758, 1009
SfoI	GGCGCC	1 cut(s)	229
SinI	GGWCC	2 cut(s)	92, 142
SmlI	CTYRAG	1 cut(s)	47
SmoI	CTYRAG	1 cut(s)	47
Sse9I	AATT	8 cut(s)	335, 441, 719, 771, 959, 1097, 1132, 1355
SsiI	CCGC	4 cut(s)	27, 140, 248, 676
SspDI	GGCGCC	1 cut(s)	227
SspMI	CTAG	1 cut(s)	858
StyD4I	CCNGG	5 cut(s)	177, 454, 532, 1163, 1359
StyI	CCWWGG	2 cut(s)	255, 271
TaaI	ACNGT	6 cut(s)	399, 413, 568, 888, 1247, 1509
TaiI	ACGT	4 cut(s)	36, 640, 1284, 1432
TaqI	TCGA	6 cut(s)	99, 150, 171, 657, 819, 1169
TaqII	GACCGA	1 cut(s)	64
TasI	AATT	8 cut(s)	335, 441, 719, 771, 959, 1097, 1132, 1355
TatI	WGTACW	1 cut(s)	888
TauI	GCSGC	2 cut(s)	30, 251
TfiI	GAWTC	3 cut(s)	187, 875, 881
Tru1I	TTAA	4 cut(s)	774, 957, 1101, 1371
Tru9I	TTAA	4 cut(s)	774, 957, 1101, 1371
TscAI	CASTG	3 cut(s)	334, 562, 1156
TseFI	GTSAC	1 cut(s)	670
TseI	GCWGC	2 cut(s)	52, 581
Tsp45I	GTSAC	1 cut(s)	670
TspDTI	ATGAA	5 cut(s)	196, 670, 716, 1076, 1134
TspRI	CASTG	3 cut(s)	334, 562, 1156
VneI	GTGCAC	1 cut(s)	1248
VpaK11BI	GGWCC	2 cut(s)	92, 142
XapI	RAATTY	5 cut(s)	335, 719, 959, 1097, 1355
XceI	RCATGY	3 cut(s)	628, 671, 814
XmiI	GTMKAC	1 cut(s)	1169
XspI	CTAG	1 cut(s)	858
ZraI	GACGTC	1 cut(s)	34
ZrmI	AGTACT	1 cut(s)	890
Zsp2I	ATGCAT	1 cut(s)	433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.