Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007131

Physical Location & Seq

Genomic Coordinates Reverse (-)

85772031 .. 85775858

Gene Structure 3828 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00148120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGCTCCTCCCAAAATCTTACTCTGCGGCGATGTCTCCGGCAACCTCAAGCAGCTCTTCAAACGAGTCGTTTCGGTCAACAAATCGGCCGGTCCGTTCGACGCGTTGTTCTGCGTCGGCCAGTTCTTCCCCGACTCGGCGGACCAGCTCGAGGAGTTCACCGGTTACATCGAAGGCCGGGCCGGGATTCCTCTCCCGACCTACTTCATCGGCGACTATGGCGTCGGTGCCACTAAGTTTCTCTTGGCCGCAACCAAGGACTCCGGGAACCAAGGCTTCAAAATGGACGGGTTGAAGGTTTGCAACAATCTCTACTGGCTGAAAGGCAGTGGCAAATTCACCTTCCACGTTTTGGCTATCAGTAGTATTGAGCTAAGCCAGAGTGTAATGTTCGAAGTTTTTAGCTTAGGGTTATCGGTGGTGTATTTCTCCGGTCTGCAATCTTCTGATAGACAACAGTTTGGGACTTACAGTCAGGATGATGTTGATGCACTGCGAGCAATTGCTGAGGATCCTGGGATTGTTGACTTGTTCCTAACATATCCTTGCTTTGGGGTTACTAATAAAGCAGCTACATCTGATGTTCCTCCCGGAGCCTCTGAGCCTTTCGGCACTGACTCTACTGTGGCAGAGTTAGTAGCTGAGATCAAACCACGGTATCATATTGCAGGCACCAAAGGCATTTTCTATGCACGTGAGCCTTACTCCAATGTCGATGCTGTGCATATCACCCGCTTCATAGGTCTTGCTCCAGTTGGAAACAAAGACAAGCAGAAATTTCTTCATGCGCTTTCCCCTACTCCAGCATCTACTATGTCTGCTCTTGAAATTAAGACAAAATCGCCAAATACTACCTTGTCTCCATACATGTATATCGAGGGAACAGCTAATGCAAAAGAAGGTGCAAAGAGGTCTAGTGATAGTGTTTCTGATTCTGATTCACAGTACTGGAGATATGATGTCTCCCAAAAAGGCAGAAACATGGAGCTGGAGATGGTAATAGGCTGTGCTTTAAGAAAGTGTGAAAGGGGTACTGATTGCAAATTTAAGCACAGCTTACAGGATGAAGGTGAAAGCAATTCTCACAAGAGACGCACTGGAAATGCTACCAGGTCGACAGAGTGCTGGTTTTGTTTGTCAAGCTCCAAAATAGAGTCTCATCTATTTATCAGCTTAGGGGAGCATTACTACTGTGCACTTGCTAAAGGCCCACTTGTTGAAGACCACGTATTGCTAATCCCTATTGGGCATTCACCCAATACCCTTTCTCTACCCTCTGAATGCGAGACTGAGCTTGGTAAATTCCAGGATGGTCTTAAAAAGTTTTATAAGAAACAAGACAAGGAAGTAGTTTTCTTTGAGTGGGCTTCAAAACTTTCAACTCATGCCAATCTTCAGGTCGTTCCTATTCCATCAGCCAAAGCAGCTAGTGTTCAAAACTTATTTCACTTAGCTGCTGACAGGTTCGAATTCAAATTTACGACCACGAAATTCAGTAACAGTTCTGATGGGAGAAAATCGTTGAGGACCCAGTTTGATAGAAATTTTAGCTTCTTCTATGCTGAACTCCCTGATGGTACGGTCCTATCACATTTAATTGAGGAGAGCGAGAAATTCCTACCCCAATTTGGACGCGAGGTTATGGCAGGTTTATTGAACAAGGCTGACAGGGCTGATTGGAGGAAGTGTACAGATAGCAAAGAAGAGGAAACGAAGATGGTAGAAAAATTCAAGACTGTAAGGTGGACACCAACCAACCCCAGATGGTCTTTGTTCAAAGATGAGGATGAGTCCAAGTACGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CwfJ_C_1 CwfJ_C_2 zf-CCCH

Protein Analysis

601

Amino Acids

66.94

Weight (kDa)

6.53

Isoelectric Point (pI)

48.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CwfJ_C_1	PF04677	365 - 482	1.9e-36	Protein similar to CwfJ C-terminal
CwfJ_C_2	PF04676	499 - 579	3.1e-17	Protein similar to CwfJ C-terminus 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007131)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56900 AT5G56900 AT5G56900
fragaria_vesca	FvH4_1g07540 FvH4_1g07540 FvH4_1g07540
malus_domestica	MD02G1080200.v1.1 MD15G1207600.v1.1
prunus_persica	Prupe.7G209200_v2.0.a1
pyrus_communis	pycom02g06370 pycom15g18400
rosa_chinensis	RchiOBHm_Chr2g0093421
rosa_laevigata	RLG00000016398
rosa_multiflora	Rmu_sc0004881.1_g000009 Rmu_sc0021911.1_g000011
rosa_roxburghii	Rroxscaffold_2G00148120
rosa_rugosa	Rorug02G0035700
rosa_samantha	Rh2AG081700 Rh2AG082300 Rh2BG083100 Rh2CG085100 Rh2DG080700 Rh2DG080800 Rh2DG081300
rosa_wichuraiana	Rw2G006490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1329
AasI	GACNNNNNNGTC	1 cut(s)	221
Acc36I	ACCTGC	1 cut(s)	1637
AccB1I	GGYRCC	2 cut(s)	227, 671
AccB7I	CCANNNNNTGG	1 cut(s)	352
AccI	GTMKAC	1 cut(s)	1115
AccII	CGCG	2 cut(s)	104, 1635
AciI	CCGC	4 cut(s)	27, 140, 249, 733
AclWI	GGATC	2 cut(s)	506, 519
AcoI	YGGCCR	3 cut(s)	87, 118, 246
AcuI	CTGAAG	1 cut(s)	1379
AcvI	CACGTG	1 cut(s)	695
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	5 cut(s)	947, 1033, 1579, 1690, 1799
AfiI	CCNNNNNNNGG	5 cut(s)	136, 151, 352, 551, 1628
AflIII	ACRYGT	2 cut(s)	102, 867
AgeI	ACCGGT	1 cut(s)	161
AhdI	GACNNNNNGTC	1 cut(s)	471
AjnI	CCWGG	3 cut(s)	514, 1109, 1305
AjuI	GAANNNNNNNTTGG	2 cut(s)	668, 700
Alw21I	GWGCWC	1 cut(s)	1198
Alw26I	GTCTC	6 cut(s)	40, 864, 967, 1084, 1161, 1280
Alw44I	GTGCAC	1 cut(s)	1194
AlwI	GGATC	2 cut(s)	506, 519
Ama87I	CYCGRG	1 cut(s)	149
AoxI	GGCC	6 cut(s)	87, 118, 175, 180, 246, 1207
ApaLI	GTGCAC	1 cut(s)	1194
ApeKI	GCWGC	4 cut(s)	52, 569, 1424, 1454
AsiGI	ACCGGT	1 cut(s)	161
AspLEI	GCGC	1 cut(s)	790
AspS9I	GGNCC	6 cut(s)	92, 142, 180, 1208, 1527, 1582
AsuC2I	CCSGG	4 cut(s)	179, 184, 265, 591
AsuHPI	GGTGA	5 cut(s)	151, 331, 721, 1082, 1245
AsuII	TTCGAA	2 cut(s)	393, 1467
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	4 cut(s)	92, 142, 1527, 1582
BaeGI	GKGCMC	1 cut(s)	1198
BaeI	ACNNNNGTAYC	2 cut(s)	641, 674
BamHI	GGATCC	1 cut(s)	511
BanI	GGYRCC	2 cut(s)	227, 671
BbrPI	CACGTG	1 cut(s)	695
BbsI	GAAGAC	1 cut(s)	1227
Bbv12I	GWGCWC	1 cut(s)	1198
BbvCI	CCTCAGC	1 cut(s)	507
BbvI	GCAGC	4 cut(s)	64, 581, 1436, 1441
BccI	CCATC	7 cut(s)	988, 1304, 1420, 1502, 1568, 1711, 1758
BciT130I	CCWGG	3 cut(s)	516, 1111, 1307
BcnI	CCSGG	4 cut(s)	179, 184, 265, 591
BcoDI	GTCTC	6 cut(s)	40, 864, 967, 1084, 1161, 1280
BfaI	CTAG	2 cut(s)	915, 1428
BfuAI	ACCTGC	1 cut(s)	1637
BisI	GCNGC	6 cut(s)	28, 53, 249, 570, 1425, 1455
BlpI	GCTNAGC	1 cut(s)	374
BlsI	GCNGC	6 cut(s)	29, 54, 250, 571, 1426, 1456
BmcAI	AGTACT	1 cut(s)	947
Bme1390I	CCNGG	7 cut(s)	179, 184, 265, 516, 591, 1111, 1307
Bme18I	GGWCC	4 cut(s)	92, 142, 1527, 1582
BmeRI	GACNNNNNGTC	1 cut(s)	471
BmeT110I	CYCGRG	1 cut(s)	149
BmgT120I	GGNCC	6 cut(s)	92, 142, 180, 1208, 1527, 1582
BmiI	GGNNCC	7 cut(s)	6, 229, 269, 513, 595, 673, 1529
BmrFI	CCNGG	7 cut(s)	179, 184, 265, 516, 591, 1111, 1307
BmrI	ACTGGG	1 cut(s)	1525
BmsI	GCATC	3 cut(s)	478, 706, 815
BmuI	ACTGGG	1 cut(s)	1525
BpiI	GAAGAC	1 cut(s)	1227
BplI	GAGNNNNNCTC	2 cut(s)	689, 721
BpmI	CTGGAG	4 cut(s)	735, 786, 970, 1010
Bpu10I	CCTNAGC	3 cut(s)	406, 507, 1174
Bpu1102I	GCTNAGC	1 cut(s)	374
Bpu14I	TTCGAA	2 cut(s)	393, 1467
BpuEI	CTTGAG	1 cut(s)	32
BpuMI	CCSGG	4 cut(s)	179, 184, 265, 591
BsaAI	YACGTR	2 cut(s)	695, 1228
BsaHI	GRCGYC	1 cut(s)	222
BsaJI	CCNNGG	4 cut(s)	255, 271, 515, 653
BsaWI	WCCGGW	2 cut(s)	161, 431
BsaXI	ACNNNNNCTCC	4 cut(s)	844, 874, 1672, 1702
Bsc4I	CCNNNNNNNGG	5 cut(s)	136, 151, 352, 551, 1628
Bse118I	RCCGGY	2 cut(s)	89, 161
Bse1I	ACTGG	6 cut(s)	121, 320, 752, 953, 1102, 1531
BseBI	CCWGG	3 cut(s)	516, 1111, 1307
BseDI	CCNNGG	4 cut(s)	255, 271, 515, 653
BseGI	GGATG	4 cut(s)	484, 1069, 1315, 1792
BseLI	CCNNNNNNNGG	5 cut(s)	136, 151, 352, 551, 1628
BseMII	CTCAG	4 cut(s)	498, 591, 633, 1281
BseNI	ACTGG	6 cut(s)	121, 320, 752, 953, 1102, 1531
BseRI	GAGGAG	2 cut(s)	167, 1616
BseSI	GKGCMC	1 cut(s)	1198
BseX3I	CGGCCG	1 cut(s)	87
BseXI	GCAGC	4 cut(s)	64, 581, 1436, 1441
Bsh1236I	CGCG	2 cut(s)	104, 1635
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1209
BshNI	GGYRCC	2 cut(s)	227, 671
BshTI	ACCGGT	1 cut(s)	161
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	1 cut(s)	1198
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	8 cut(s)	39, 90, 162, 178, 183, 264, 432, 591
BslFI	GGGAC	1 cut(s)	478
BslI	CCNNNNNNNGG	5 cut(s)	136, 151, 352, 551, 1628
BsmAI	GTCTC	6 cut(s)	40, 864, 967, 1084, 1161, 1280
BsmBI	CGTCTC	1 cut(s)	1084
BsmFI	GGGAC	1 cut(s)	478
BsmI	GAATGC	2 cut(s)	1249, 1286
BsnI	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1209
BsoBI	CYCGRG	1 cut(s)	149
Bsp119I	TTCGAA	2 cut(s)	393, 1467
Bsp1286I	GDGCHC	1 cut(s)	1198
Bsp1407I	TGTACA	1 cut(s)	1688
Bsp143I	GATC	2 cut(s)	511, 645
Bsp1720I	GCTNAGC	1 cut(s)	374
BspACI	CCGC	4 cut(s)	27, 140, 249, 733
BspANI	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1209
BspCNI	CTCAG	4 cut(s)	499, 592, 634, 1282
BspFNI	CGCG	2 cut(s)	104, 1635
BspLI	GGNNCC	7 cut(s)	6, 229, 269, 513, 595, 673, 1529
BspMI	ACCTGC	1 cut(s)	1637
BspPI	GGATC	2 cut(s)	506, 519
BspQI	GCTCTTC	1 cut(s)	62
BspT104I	TTCGAA	2 cut(s)	393, 1467
BspT107I	GGYRCC	2 cut(s)	227, 671
BsrFI	RCCGGY	2 cut(s)	89, 161
BsrGI	TGTACA	1 cut(s)	1688
BsrI	ACTGG	6 cut(s)	121, 320, 752, 953, 1102, 1531
BssAI	RCCGGY	2 cut(s)	89, 161
BssECI	CCNNGG	4 cut(s)	255, 271, 515, 653
BssMI	GATC	2 cut(s)	511, 645
BssNI	GRCGYC	1 cut(s)	222
BssT1I	CCWWGG	2 cut(s)	255, 271
Bst2UI	CCWGG	3 cut(s)	516, 1111, 1307
Bst4CI	ACNGT	9 cut(s)	459, 473, 625, 657, 945, 1193, 1502, 1582, 1738
Bst6I	CTCTTC	2 cut(s)	62, 1698
BstACI	GRCGYC	1 cut(s)	222
BstAUI	TGTACA	1 cut(s)	1688
BstBAI	YACGTR	2 cut(s)	695, 1228
BstBI	TTCGAA	2 cut(s)	393, 1467
BstC8I	GCNNGC	2 cut(s)	498, 670
BstDEI	CTNAG	9 cut(s)	234, 374, 406, 507, 600, 642, 1174, 1290, 1450
BstDSI	CCRYGG	1 cut(s)	653
BstF5I	GGATG	4 cut(s)	484, 1069, 1315, 1792
BstFNI	CGCG	2 cut(s)	104, 1635
BstHHI	GCGC	1 cut(s)	790
BstKTI	GATC	2 cut(s)	514, 648
BstMAI	GTCTC	6 cut(s)	40, 864, 967, 1084, 1161, 1280
BstMBI	GATC	2 cut(s)	511, 645
BstMCI	CGRYCG	1 cut(s)	90
BstMWI	GCNNNNNNNGC	5 cut(s)	219, 497, 678, 1424, 1670
BstNI	CCWGG	3 cut(s)	516, 1111, 1307
BstNSI	RCATGY	1 cut(s)	871
BstSCI	CCNGG	7 cut(s)	177, 182, 263, 514, 589, 1109, 1305
BstSLI	GKGCMC	1 cut(s)	1198
BstUI	CGCG	2 cut(s)	104, 1635
BstV1I	GCAGC	4 cut(s)	64, 581, 1436, 1441
BstV2I	GAAGAC	1 cut(s)	1227
BstX2I	RGATCY	1 cut(s)	511
BstYI	RGATCY	1 cut(s)	511
BstZI	CGGCCG	1 cut(s)	87
BsuRI	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1209
BtgI	CCRYGG	1 cut(s)	653
BtgZI	GCGATG	1 cut(s)	45
BtsCI	GGATG	4 cut(s)	484, 1069, 1315, 1792
BtsI	GCAGTG	2 cut(s)	334, 491
BtsIMutI	CAGTG	4 cut(s)	334, 491, 612, 1095
BveI	ACCTGC	1 cut(s)	1637
Cac8I	GCNNGC	2 cut(s)	498, 670
CfoI	GCGC	1 cut(s)	790
Cfr10I	RCCGGY	2 cut(s)	89, 161
Cfr13I	GGNCC	6 cut(s)	92, 142, 180, 1208, 1527, 1582
CpoI	CGGWCCG	1 cut(s)	92
CseI	GACGC	5 cut(s)	103, 110, 211, 1101, 1641
CsiI	ACCWGGT	1 cut(s)	1109
Csp6I	GTAC	5 cut(s)	946, 1032, 1578, 1689, 1798
CspAI	ACCGGT	1 cut(s)	161
CspI	CGGWCCG	1 cut(s)	92
CviAII	CATG	4 cut(s)	785, 868, 982, 1385
CviQI	GTAC	5 cut(s)	946, 1032, 1578, 1689, 1798
DdeI	CTNAG	9 cut(s)	234, 374, 406, 507, 600, 642, 1174, 1290, 1450
DpnI	GATC	2 cut(s)	513, 647
DpnII	GATC	2 cut(s)	511, 645
DrdI	GACNNNNNNGTC	1 cut(s)	221
DriI	GACNNNNNGTC	1 cut(s)	471
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	3 cut(s)	87, 118, 246
EagI	CGGCCG	1 cut(s)	87
Eam1104I	CTCTTC	2 cut(s)	62, 1698
Eam1105I	GACNNNNNGTC	1 cut(s)	471
EarI	CTCTTC	2 cut(s)	62, 1698
EciI	GGCGGA	1 cut(s)	155
EclXI	CGGCCG	1 cut(s)	87
Eco130I	CCWWGG	2 cut(s)	255, 271
Eco47I	GGWCC	4 cut(s)	92, 142, 1527, 1582
Eco52I	CGGCCG	1 cut(s)	87
Eco57I	CTGAAG	1 cut(s)	1379
Eco72I	CACGTG	1 cut(s)	695
Eco88I	CYCGRG	1 cut(s)	149
EcoO109I	RGGNCCY	1 cut(s)	1527
EcoRI	GAATTC	1 cut(s)	1469
EcoRII	CCWGG	3 cut(s)	514, 1109, 1305
EcoT14I	CCWWGG	2 cut(s)	255, 271
ErhI	CCWWGG	2 cut(s)	255, 271
Esp3I	CGTCTC	1 cut(s)	1084
FaeI	CATG	4 cut(s)	788, 871, 985, 1388
FalI	AAGNNNNNCTT	8 cut(s)	41, 73, 227, 259, 1040, 1072, 1197, 1229
FaqI	GGGAC	1 cut(s)	478
FatI	CATG	4 cut(s)	784, 867, 981, 1384
FauI	CCCGC	1 cut(s)	740
FblI	GTMKAC	1 cut(s)	1115
Fnu4HI	GCNGC	6 cut(s)	28, 53, 249, 570, 1425, 1455
FokI	GGATG	4 cut(s)	491, 1076, 1322, 1799
Fsp4HI	GCNGC	6 cut(s)	28, 53, 249, 570, 1425, 1455
FspBI	CTAG	2 cut(s)	915, 1428
GlaI	GCGC	1 cut(s)	789
GluI	GCNGC	6 cut(s)	28, 53, 249, 570, 1425, 1455
GsuI	CTGGAG	4 cut(s)	735, 786, 970, 1010
HaeIII	GGCC	6 cut(s)	89, 120, 177, 182, 248, 1209
HapII	CCGG	8 cut(s)	39, 90, 162, 178, 183, 264, 432, 591
HgaI	GACGC	5 cut(s)	103, 110, 211, 1101, 1641
HhaI	GCGC	1 cut(s)	790
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	4 cut(s)	788, 871, 985, 1388
Hin6I	GCGC	1 cut(s)	788
HinP1I	GCGC	1 cut(s)	788
HincII	GTYRAC	3 cut(s)	79, 526, 1116
HindII	GTYRAC	3 cut(s)	79, 526, 1116
HinfI	GANTC	9 cut(s)	66, 134, 187, 260, 617, 932, 938, 1154, 1790
HpaII	CCGG	8 cut(s)	39, 90, 162, 178, 183, 264, 432, 591
HphI	GGTGA	5 cut(s)	151, 331, 721, 1082, 1245
Hpy166II	GTNNAC	7 cut(s)	79, 159, 526, 1116, 1196, 1689, 1746
Hpy188I	TCNGA	7 cut(s)	448, 580, 601, 931, 937, 1279, 1507
Hpy188III	TCNNGA	4 cut(s)	196, 476, 824, 1732
Hpy8I	GTNNAC	7 cut(s)	79, 159, 526, 1116, 1196, 1689, 1746
Hpy99I	CGWCG	3 cut(s)	104, 119, 227
HpyAV	CCTTC	5 cut(s)	167, 289, 352, 893, 1061
HpyCH4III	ACNGT	9 cut(s)	459, 473, 625, 657, 945, 1193, 1502, 1582, 1738
HpyCH4IV	ACGT	4 cut(s)	348, 694, 1227, 1800
HpyF10VI	GCNNNNNNNGC	5 cut(s)	219, 497, 678, 1424, 1670
HpyF3I	CTNAG	9 cut(s)	234, 374, 406, 507, 600, 642, 1174, 1290, 1450
HpySE526I	ACGT	4 cut(s)	348, 694, 1227, 1800
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	4 cut(s)	788, 871, 985, 1388
HspAI	GCGC	1 cut(s)	788
Kzo9I	GATC	2 cut(s)	511, 645
LguI	GCTCTTC	1 cut(s)	62
LmnI	GCTCC	6 cut(s)	10, 593, 754, 985, 1148, 1180
Lsp1109I	GCAGC	4 cut(s)	64, 581, 1436, 1441
LweI	GCATC	3 cut(s)	478, 706, 815
MabI	ACCWGGT	1 cut(s)	1109
MaeI	CTAG	2 cut(s)	915, 1428
MaeII	ACGT	4 cut(s)	348, 694, 1227, 1800
MaeIII	GTNAC	3 cut(s)	164, 556, 1496
MalI	GATC	2 cut(s)	513, 647
MboI	GATC	2 cut(s)	511, 645
MboII	GAAGA	9 cut(s)	49, 118, 435, 773, 1232, 1385, 1546, 1715, 1726
MfeI	CAATTG	1 cut(s)	501
MflI	RGATCY	1 cut(s)	511
MhlI	GDGCHC	1 cut(s)	1198
MluI	ACGCGT	1 cut(s)	102
MlyI	GAGTC	6 cut(s)	75, 128, 254, 611, 1163, 1799
MmeI	TCCRAC	1 cut(s)	736
MseI	TTAA	6 cut(s)	831, 1013, 1047, 1317, 1595, 1804
MspI	CCGG	8 cut(s)	39, 90, 162, 178, 183, 264, 432, 591
MspR9I	CCNGG	7 cut(s)	179, 184, 265, 516, 591, 1111, 1307
MunI	CAATTG	1 cut(s)	501
Mva1269I	GAATGC	2 cut(s)	1249, 1286
MvaI	CCWGG	3 cut(s)	516, 1111, 1307
MvnI	CGCG	2 cut(s)	104, 1635
MwoI	GCNNNNNNNGC	5 cut(s)	219, 497, 678, 1424, 1670
NciI	CCSGG	4 cut(s)	179, 184, 265, 591
NdeII	GATC	2 cut(s)	511, 645
NlaIII	CATG	4 cut(s)	788, 871, 985, 1388
NlaIV	GGNNCC	7 cut(s)	6, 229, 269, 513, 595, 673, 1529
NmeAIII	GCCGAG	1 cut(s)	116
NspI	RCATGY	1 cut(s)	871
NspV	TTCGAA	2 cut(s)	393, 1467
PaeR7I	CTCGAG	1 cut(s)	149
PciI	ACATGT	1 cut(s)	867
PciSI	GCTCTTC	1 cut(s)	62
PcsI	WCGNNNNNNNCGW	1 cut(s)	92
PctI	GAATGC	2 cut(s)	1249, 1286
PfeI	GAWTC	3 cut(s)	187, 932, 938
PflMI	CCANNNNNTGG	1 cut(s)	352
PfoI	TCCNGGA	3 cut(s)	263, 589, 1305
PinAI	ACCGGT	1 cut(s)	161
PkrI	GCNGC	6 cut(s)	29, 54, 250, 571, 1426, 1456
PleI	GAGTC	6 cut(s)	74, 128, 254, 611, 1162, 1798
PmaCI	CACGTG	1 cut(s)	695
PmlI	CACGTG	1 cut(s)	695
PpsI	GAGTC	6 cut(s)	74, 128, 254, 611, 1162, 1798
Ppu21I	YACGTR	2 cut(s)	695, 1228
PpuMI	RGGWCCY	1 cut(s)	1527
PscI	ACATGT	1 cut(s)	867
PsiI	TTATAA	1 cut(s)	1329
Psp5II	RGGWCCY	1 cut(s)	1527
Psp6I	CCWGG	3 cut(s)	514, 1109, 1305
PspCI	CACGTG	1 cut(s)	695
PspGI	CCWGG	3 cut(s)	514, 1109, 1305
PspN4I	GGNNCC	7 cut(s)	6, 229, 269, 513, 595, 673, 1529
PspPI	GGNCC	6 cut(s)	92, 142, 180, 1208, 1527, 1582
PspPPI	RGGWCCY	1 cut(s)	1527
PspXI	VCTCGAGB	1 cut(s)	149
PsuI	RGATCY	1 cut(s)	511
RsaI	GTAC	5 cut(s)	947, 1033, 1579, 1690, 1799
RsaNI	GTAC	5 cut(s)	946, 1032, 1578, 1689, 1798
Rsr2I	CGGWCCG	1 cut(s)	92
RsrII	CGGWCCG	1 cut(s)	92
SalI	GTCGAC	1 cut(s)	1114
SapI	GCTCTTC	1 cut(s)	62
SaqAI	TTAA	6 cut(s)	831, 1013, 1047, 1317, 1595, 1804
SatI	GCNGC	6 cut(s)	28, 53, 249, 570, 1425, 1455
Sau3AI	GATC	2 cut(s)	511, 645
Sau96I	GGNCC	6 cut(s)	92, 142, 180, 1208, 1527, 1582
ScaI	AGTACT	1 cut(s)	947
SchI	GAGTC	6 cut(s)	75, 128, 254, 611, 1163, 1799
ScrFI	CCNGG	7 cut(s)	179, 184, 265, 516, 591, 1111, 1307
SduI	GDGCHC	1 cut(s)	1198
SexAI	ACCWGGT	1 cut(s)	1109
SfaNI	GCATC	3 cut(s)	478, 706, 815
Sfr274I	CTCGAG	1 cut(s)	149
SfuI	TTCGAA	2 cut(s)	393, 1467
SinI	GGWCC	4 cut(s)	92, 142, 1527, 1582
SlaI	CTCGAG	1 cut(s)	149
SmlI	CTYRAG	2 cut(s)	47, 149
SmoI	CTYRAG	2 cut(s)	47, 149
SsiI	CCGC	4 cut(s)	27, 140, 249, 733
SspMI	CTAG	2 cut(s)	915, 1428
StyD4I	CCNGG	7 cut(s)	177, 182, 263, 514, 589, 1109, 1305
StyI	CCWWGG	2 cut(s)	255, 271
TaaI	ACNGT	9 cut(s)	459, 473, 625, 657, 945, 1193, 1502, 1582, 1738
TaiI	ACGT	4 cut(s)	351, 697, 1230, 1803
TaqI	TCGA	8 cut(s)	99, 150, 171, 393, 714, 876, 1115, 1467
TaqII	GACCGA	1 cut(s)	64
TatI	WGTACW	2 cut(s)	945, 1688
TauI	GCSGC	2 cut(s)	30, 251
TfiI	GAWTC	3 cut(s)	187, 932, 938
Tru1I	TTAA	6 cut(s)	831, 1013, 1047, 1317, 1595, 1804
Tru9I	TTAA	6 cut(s)	831, 1013, 1047, 1317, 1595, 1804
TscAI	CASTG	4 cut(s)	334, 498, 619, 1102
TseI	GCWGC	4 cut(s)	52, 569, 1424, 1454
TspDTI	ATGAA	4 cut(s)	196, 727, 773, 1080
TspGWI	ACGGA	1 cut(s)	84
TspRI	CASTG	4 cut(s)	334, 498, 619, 1102
Van91I	CCANNNNNTGG	1 cut(s)	352
VneI	GTGCAC	1 cut(s)	1194
VpaK11BI	GGWCC	4 cut(s)	92, 142, 1527, 1582
XceI	RCATGY	1 cut(s)	871
XhoI	CTCGAG	1 cut(s)	149
XmiI	GTMKAC	1 cut(s)	1115
XspI	CTAG	2 cut(s)	915, 1428
ZrmI	AGTACT	1 cut(s)	947

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.