Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003032

Physical Location & Seq

Genomic Coordinates Reverse (-)

7127963 .. 7137411

Gene Structure 9449 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016501

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2517 bp

ATGGATGATGATGAATTCTACGGCCCTCCTCGTTCTCTTCTCCATTTGGCTCTGAGAACCCTTGTCGTCGAAGAATCATCTGCTTTGTTATGGCCGCCGCCGCTGACTTCGGTCTCTGAAATTTCGTTTCCTCCTTTGGATTTGGCAGTCGGAGGAGGGAAGCTTTTTAGTATGGATAAAAGTGAAGGGTCGGGTGGCCCTGGTTGGGGCACTTCGCTTTTCATGCAAACAACGGAAGATGTTGCAAGAGCAGTTGCTGCTGCCGCAGCTGCTGCTACTGCCACACGGCCGTCAGTTGTATATTCCTCGAAAGAAGAAGATGGTGGTAGTCCACTTCAAAGACTGCAACGCCAATTTAATAAAGTGCTAAAAGGCTTCTCAAGTCCTCCTGAAGTGAAAACAGGAAGAACTTACAATCCAGAAGTTTTGACCAGCCAGAAGCGTCAATGGGCAAACTTTCAGTTGCAGCACTTGGATCATAGGTCTTTAAAGGAGCCAACAAGGCTTTTCGAGAGCATGATAGTTGTGGGGCTTCACCCTAACTGTGATATCCAGGCACTCCAAAGGCAATATTTTGCAAGAAAGTCTGAAGGTGCAGGAAAATTGCGAAGTGCACTTGGTAACCAGAATCAATCTCGAGTAGAACCCAATATTGAACCTCAGGTGTTATTGGTTTACCCTCCGGAAAAACAGCTGCCTCTTCAATACAAGGATCTCATTTCATTTTGCTTCCCAGGAGGCCTAGAGGTTCATGCTGTTGAGAGAACTCCTTCCATGAGTGAGTTGAATGAACTTCTTCTGGGGCAGGAGCATTTTAAACAAAGTGATCTGTCCTTTGTATTCCGGTTACAGGTTGCTGATGACTCAACTCTGTATGGATGCTGCGTGTTAGTGGAAGAATTGGTGCAAAAACCCTCTGGATTGCTTTCCATGATTTCTGAAAAACATCCTTCTCGCCCGTCTCTGAGTCGTCATATATTAACCACTCGGAGATGTTATTGCATTCTTTCGAGGATTCCTGCCTTTGAGTTACATTTTGGTGTATTGAATAGCATCTTCACAGAAGAAAGGTTGGAACGATTAACAAAAGGTATTGGTCTTTTGGATTTAGAATCTCCAAAGGATAATAGAAATGATGAAAATTTAGAGGAAAATACAGAAGAAATTCCAGACACTGGATCACTAAATAGTAGAACAGCGGACATGGTAAATGGCACAGCAGAATTTTGTCAGACAAGCCTAAAAGATGATTCACCTGAGAGAGTTGTTGTTGTTCCAATTCATCCTGAAACCGAGACGGTCAGTTCCAAGATAAAATCTTGTGTGGCAAATACAGAAGTTTGTGAGGTCTATGCTGATGATTTCTCTACAAACAAGCCTGCTTTTGAAAGGCGATTACCAAATGCTGTTCTACCTCTCTTGCGTTACTATCAGTATGAAAGTTCTGATTCTTCCTCCAGTCTTCAGGGTTCTCCTAGTGAAGACAGGAATTTTAGGAGTGATGTCGATGATATAGAGACGGAAGAGGCATCTTTCTCTGGCCAAGACGATTCTGATCTCATTGATATTCTTGAATGGGCAAAGGCAAACGATCATGGATCACTGCAGATAATAAGTGAGTTCTACCAGTTACATTGTCCTGCCAGAGGCTCCACAATTAGATTCCATCCTTTGGAGCACCTGCATCCCTTGGAATATTATAGACCAGATGAAACAGTTTTACATATTGGTGGCTCAACCATTGATTTGAGGTCCTGTAGTACAAGTCTGGAATTTGCTGAGGCGCACAGCGCACTCCTGGCAGAGGAGGAAGCAACTGCATTATCAGTATGGGCTATTGCATGCATATGTGGCTCCTTACGTCTTGAAAATGTATTAGCAATGTTTGCAGGAGCACTGTTGGAGAAGCAAATTGTAATTATTTGTTCCAATTTGGGTATCTTATCTGCTTCAGTGTTGTCCATTATCCCTCTAATTCGTCCCTACCAGTGGCAAAGCCTACTAATGCCAGTTTTACCAAGTGACATGATGGACTTTTTGGATGCACCTGTTCCGTACATAGTTGGGGTGAAGAACAAAACACATGAAGTACAGTCCAAACTATCTAATGTAATTCTGGTTGATGCCAACAAGAACCAGGTGAAGTCACCAACAATACCTCATTTGCCACAACATCGGGAATTATTTTCAGCATTAAGTCCTTATCATGCAAAGCTTGTGGGAGAGAGTTTTTTGGCTAGGAAAAGACCAGTGTATGAGTGCACAGATGAACAGGTTGAAGCTGCCAAAGGTTTCCTAGGAGTCTTAAGAACTTACTTGGATTCTCTTTGCTCTAATCTCCGTTCACACACAATTACAAATGTACAATCGAATGACGATAAGGTGTCACTACTTCTGAAAGAGAGTTTCATTGACTCATTTCCTAGTCGCGATCGACCATTTATGAAGCTTTTCGTGGACACCCAACTCTTTTCTGTACATACAGACCTTGTTCTCTCTTTCTTCCAGAAGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DENN uDENN

Protein Analysis

839

Amino Acids

93.49

Weight (kDa)

5.2

Isoelectric Point (pI)

53.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
uDENN	PF03456	220 - 297	4.2e-07	uDENN domain
DENN	PF02141	609 - 711	2.1e-23	DENN (AEX-3) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35560 AT5G35560
fragaria_vesca	FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450
malus_domestica	MD00G1142500.v1.1 MD02G1088900.v1.1 MD02G1089000.v1.1 MD15G1216100.v1.1
prunus_persica	Prupe.7G200900_v2.0.a1 Prupe.7G200900_v2.0.a1 Prupe.7G200900_v2.0.a1
pyrus_communis	pycom15g19170
rosa_chinensis	RchiOBHm_Chr2g0094551
rosa_laevigata	RLG00000016501
rosa_multiflora	Rmu_sc0004359.1_g000040
rosa_roxburghii	Rroxscaffold_2G00147070
rosa_rugosa	Rorug02G0044800 Rorug02G0044900 Rorug02G0045000 Rorug02G0045100 Rorug02G0045100 Rorug02G0045100
rosa_samantha	Rh2AG093000 Rh2BG093300 Rh2CG095700 Rh2DG092100
rosa_wichuraiana	Rw7G039010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1689
Acc36I	ACCTGC	1 cut(s)	1689
AccB7I	CCANNNNNTGG	2 cut(s)	1175, 1672
AccII	CGCG	1 cut(s)	2430
AccIII	TCCGGA	1 cut(s)	682
AciI	CCGC	5 cut(s)	95, 98, 101, 264, 1199
AclWI	GGATC	4 cut(s)	483, 720, 1186, 1606
AcoI	YGGCCR	3 cut(s)	92, 287, 1540
AcsI	RAATTY	7 cut(s)	14, 120, 1141, 1164, 1223, 1489, 1772
AcuI	CTGAAG	4 cut(s)	411, 609, 1448, 1935
AfaI	GTAC	5 cut(s)	1762, 2057, 2091, 2364, 2478
AfiI	CCNNNNNNNGG	8 cut(s)	205, 206, 850, 1175, 1646, 1672, 1804, 1989
AflII	CTTAAG	1 cut(s)	2305
AgsI	TTSAA	9 cut(s)	338, 656, 704, 787, 1048, 1388, 1574, 1868, 2279
AjnI	CCWGG	5 cut(s)	199, 552, 733, 1797, 2136
AloI	GAACNNNNNNTCC	2 cut(s)	400, 432
AluBI	AGCT	6 cut(s)	163, 269, 694, 2215, 2282, 2449
AluI	AGCT	6 cut(s)	163, 269, 694, 2215, 2282, 2449
Alw21I	GWGCWC	4 cut(s)	616, 1680, 1897, 2264
Alw26I	GTCTC	4 cut(s)	118, 966, 1289, 1511
Alw44I	GTGCAC	2 cut(s)	612, 2260
AlwI	GGATC	4 cut(s)	483, 720, 1186, 1606
AlwNI	CAGNNNCTG	3 cut(s)	257, 272, 1175
Ama87I	CYCGRG	1 cut(s)	636
Aor13HI	TCCGGA	1 cut(s)	682
AoxI	GGCC	6 cut(s)	22, 92, 196, 287, 739, 1540
ApaLI	GTGCAC	2 cut(s)	612, 2260
ApeKI	GCWGC	9 cut(s)	257, 260, 266, 269, 272, 466, 694, 882, 2282
ApoI	RAATTY	7 cut(s)	14, 120, 1141, 1164, 1223, 1489, 1772
Asp700I	GAANNNNTTC	4 cut(s)	769, 795, 1164, 2450
AspA2I	CCTAGG	1 cut(s)	2296
AspLEI	GCGC	2 cut(s)	1786, 1793
AspS9I	GGNCC	3 cut(s)	23, 197, 1752
AsuHPI	GGTGA	5 cut(s)	527, 1245, 2080, 2139, 2152
AvaI	CYCGRG	1 cut(s)	636
AvaII	GGWCC	1 cut(s)	1752
AvrII	CCTAGG	1 cut(s)	2296
AxyI	CCTNAGG	1 cut(s)	660
BaeGI	GKGCMC	3 cut(s)	212, 616, 2264
BalI	TGGCCA	1 cut(s)	1542
BbsI	GAAGAC	2 cut(s)	1454, 1488
Bbv12I	GWGCWC	4 cut(s)	616, 1680, 1897, 2264
BbvCI	CCTCAGC	1 cut(s)	1779
BbvI	GCAGC	9 cut(s)	244, 247, 256, 259, 278, 478, 681, 869, 2269
BccI	CCATC	3 cut(s)	314, 1674, 2023
BceAI	ACGGC	3 cut(s)	37, 274, 302
BciT130I	CCWGG	5 cut(s)	201, 554, 735, 1799, 2138
BcoDI	GTCTC	4 cut(s)	118, 966, 1289, 1511
BfaI	CTAG	5 cut(s)	743, 1476, 2238, 2297, 2424
BfmI	CTRYAG	2 cut(s)	1604, 1756
BfrI	CTTAAG	1 cut(s)	2305
BfuAI	ACCTGC	1 cut(s)	1689
BglI	GCCNNNNNGGC	1 cut(s)	502
BlnI	CCTAGG	1 cut(s)	2296
Bme1390I	CCNGG	5 cut(s)	201, 554, 735, 1799, 2138
Bme18I	GGWCC	1 cut(s)	1752
BmeT110I	CYCGRG	1 cut(s)	636
BmgT120I	GGNCC	3 cut(s)	23, 197, 1752
BmiI	GGNNCC	3 cut(s)	495, 1651, 1855
BmrFI	CCNGG	5 cut(s)	201, 554, 735, 1799, 2138
BmsI	GCATC	6 cut(s)	869, 1062, 1538, 1693, 2032, 2113
BoxI	GACNNNNGTC	1 cut(s)	110
BpiI	GAAGAC	2 cut(s)	1454, 1488
BpmI	CTGGAG	1 cut(s)	1441
Bpu10I	CCTNAGC	1 cut(s)	1779
BpuEI	CTTGAG	1 cut(s)	364
BsaBI	GATNNNNATC	1 cut(s)	1554
BsaI	GGTCTC	1 cut(s)	118
BsaJI	CCNNGG	4 cut(s)	199, 733, 1689, 2296
BsaWI	WCCGGW	2 cut(s)	682, 843
Bsc4I	CCNNNNNNNGG	8 cut(s)	205, 206, 850, 1175, 1646, 1672, 1804, 1989
Bse1I	ACTGG	6 cut(s)	1180, 1458, 1627, 1987, 2009, 2249
Bse21I	CCTNAGG	1 cut(s)	660
Bse3DI	GCAATG	1 cut(s)	1887
Bse8I	GATNNNNATC	1 cut(s)	1554
BseAI	TCCGGA	1 cut(s)	682
BseBI	CCWGG	5 cut(s)	201, 554, 735, 1799, 2138
BseDI	CCNNGG	4 cut(s)	199, 733, 1689, 2296
BseGI	GGATG	7 cut(s)	10, 884, 946, 1282, 1666, 1684, 2047
BseJI	GATNNNNATC	1 cut(s)	1554
BseLI	CCNNNNNNNGG	8 cut(s)	205, 206, 850, 1175, 1646, 1672, 1804, 1989
BseMI	GCAATG	1 cut(s)	1887
BseMII	CTCAG	5 cut(s)	44, 674, 956, 1248, 1770
BseNI	ACTGG	6 cut(s)	1180, 1458, 1627, 1987, 2009, 2249
BseRI	GAGGAG	3 cut(s)	18, 168, 1820
BseSI	GKGCMC	3 cut(s)	212, 616, 2264
BseX3I	CGGCCG	1 cut(s)	287
BseXI	GCAGC	9 cut(s)	244, 247, 256, 259, 278, 478, 681, 869, 2269
BsgI	GTGCAG	1 cut(s)	615
Bsh1236I	CGCG	1 cut(s)	2430
Bsh1285I	CGRYCG	2 cut(s)	290, 2434
BshFI	GGCC	6 cut(s)	24, 94, 198, 289, 741, 1542
BsiEI	CGRYCG	2 cut(s)	290, 2434
BsiHKAI	GWGCWC	4 cut(s)	616, 1680, 1897, 2264
BsiHKCI	CYCGRG	1 cut(s)	636
BsiSI	CCGG	2 cut(s)	683, 844
BslFI	GGGAC	1 cut(s)	1965
BslI	CCNNNNNNNGG	8 cut(s)	205, 206, 850, 1175, 1646, 1672, 1804, 1989
BsmAI	GTCTC	4 cut(s)	118, 966, 1289, 1511
BsmBI	CGTCTC	3 cut(s)	966, 1289, 1511
BsmFI	GGGAC	1 cut(s)	1965
BsmI	GAATGC	1 cut(s)	1002
BsnI	GGCC	6 cut(s)	24, 94, 198, 289, 741, 1542
Bso31I	GGTCTC	1 cut(s)	118
BsoBI	CYCGRG	1 cut(s)	636
Bsp1286I	GDGCHC	5 cut(s)	212, 616, 1680, 1897, 2264
Bsp13I	TCCGGA	1 cut(s)	682
Bsp1407I	TGTACA	2 cut(s)	2362, 2476
Bsp143I	GATC	8 cut(s)	475, 712, 826, 1178, 1555, 1591, 1598, 2431
Bsp68I	TCGCGA	1 cut(s)	2430
BspACI	CCGC	5 cut(s)	95, 98, 101, 264, 1199
BspANI	GGCC	6 cut(s)	24, 94, 198, 289, 741, 1542
BspCNI	CTCAG	5 cut(s)	45, 673, 957, 1249, 1771
BspEI	TCCGGA	1 cut(s)	682
BspFNI	CGCG	1 cut(s)	2430
BspLI	GGNNCC	3 cut(s)	495, 1651, 1855
BspMAI	CTGCAG	1 cut(s)	1608
BspMI	ACCTGC	1 cut(s)	1689
BspPI	GGATC	4 cut(s)	483, 720, 1186, 1606
BspTI	CTTAAG	1 cut(s)	2305
BspTNI	GGTCTC	1 cut(s)	118
BsrDI	GCAATG	1 cut(s)	1887
BsrGI	TGTACA	2 cut(s)	2362, 2476
BsrI	ACTGG	6 cut(s)	1180, 1458, 1627, 1987, 2009, 2249
BssECI	CCNNGG	4 cut(s)	199, 733, 1689, 2296
BssMI	GATC	8 cut(s)	475, 712, 826, 1178, 1555, 1591, 1598, 2431
BssT1I	CCWWGG	2 cut(s)	1689, 2296
Bst2UI	CCWGG	5 cut(s)	201, 554, 735, 1799, 2138
Bst4CI	ACNGT	5 cut(s)	545, 1300, 1717, 1899, 2094
Bst6I	CTCTTC	3 cut(s)	42, 705, 1518
BstAFI	CTTAAG	1 cut(s)	2305
BstAPI	GCANNNNNTGC	3 cut(s)	257, 272, 1886
BstAUI	TGTACA	2 cut(s)	2362, 2476
BstC8I	GCNNGC	2 cut(s)	1380, 1843
BstDEI	CTNAG	5 cut(s)	53, 660, 965, 1257, 1779
BstEII	GGTNACC	1 cut(s)	620
BstENI	CCTNNNNNAGG	2 cut(s)	1644, 1802
BstF5I	GGATG	7 cut(s)	10, 884, 946, 1282, 1666, 1684, 2047
BstFNI	CGCG	1 cut(s)	2430
BstHHI	GCGC	2 cut(s)	1786, 1793
BstKTI	GATC	8 cut(s)	478, 715, 829, 1181, 1558, 1594, 1601, 2434
BstMAI	GTCTC	4 cut(s)	118, 966, 1289, 1511
BstMBI	GATC	8 cut(s)	475, 712, 826, 1178, 1555, 1591, 1598, 2431
BstMCI	CGRYCG	2 cut(s)	290, 2434
BstNI	CCWGG	5 cut(s)	201, 554, 735, 1799, 2138
BstNSI	RCATGY	1 cut(s)	1845
BstPAI	GACNNNNGTC	1 cut(s)	110
BstPI	GGTNACC	1 cut(s)	620
BstSCI	CCNGG	5 cut(s)	199, 552, 733, 1797, 2136
BstSFI	CTRYAG	2 cut(s)	1604, 1756
BstSLI	GKGCMC	3 cut(s)	212, 616, 2264
BstUI	CGCG	1 cut(s)	2430
BstV1I	GCAGC	9 cut(s)	244, 247, 256, 259, 278, 478, 681, 869, 2269
BstV2I	GAAGAC	2 cut(s)	1454, 1488
BstX2I	RGATCY	1 cut(s)	712
BstYI	RGATCY	1 cut(s)	712
BstZI	CGGCCG	1 cut(s)	287
Bsu36I	CCTNAGG	1 cut(s)	660
BsuRI	GGCC	6 cut(s)	24, 94, 198, 289, 741, 1542
BtsCI	GGATG	7 cut(s)	10, 884, 946, 1282, 1666, 1684, 2047
BtsI	GCAGTG	1 cut(s)	1601
BtsIMutI	CAGTG	6 cut(s)	1173, 1601, 1895, 1959, 1994, 2256
BtuMI	TCGCGA	1 cut(s)	2430
BveI	ACCTGC	1 cut(s)	1689
Cac8I	GCNNGC	2 cut(s)	1380, 1843
CaiI	CAGNNNCTG	3 cut(s)	257, 272, 1175
CfoI	GCGC	2 cut(s)	1786, 1793
Cfr13I	GGNCC	3 cut(s)	23, 197, 1752
CseI	GACGC	1 cut(s)	431
CsiI	ACCWGGT	1 cut(s)	2136
Csp6I	GTAC	5 cut(s)	1761, 2056, 2090, 2363, 2477
CspCI	CAANNNNNGTGG	2 cut(s)	2199, 2234
CviQI	GTAC	5 cut(s)	1761, 2056, 2090, 2363, 2477
DdeI	CTNAG	5 cut(s)	53, 660, 965, 1257, 1779
DpnI	GATC	8 cut(s)	477, 714, 828, 1180, 1557, 1593, 1600, 2433
DpnII	GATC	8 cut(s)	475, 712, 826, 1178, 1555, 1591, 1598, 2431
DraI	TTTAAA	2 cut(s)	489, 817
EaeI	YGGCCR	3 cut(s)	92, 287, 1540
EagI	CGGCCG	1 cut(s)	287
Eam1104I	CTCTTC	3 cut(s)	42, 705, 1518
EarI	CTCTTC	3 cut(s)	42, 705, 1518
EclXI	CGGCCG	1 cut(s)	287
Eco130I	CCWWGG	2 cut(s)	1689, 2296
Eco147I	AGGCCT	1 cut(s)	741
Eco31I	GGTCTC	1 cut(s)	118
Eco32I	GATATC	1 cut(s)	550
Eco47I	GGWCC	1 cut(s)	1752
Eco52I	CGGCCG	1 cut(s)	287
Eco57I	CTGAAG	4 cut(s)	411, 609, 1448, 1935
Eco81I	CCTNAGG	1 cut(s)	660
Eco88I	CYCGRG	1 cut(s)	636
Eco91I	GGTNACC	1 cut(s)	620
EcoNI	CCTNNNNNAGG	2 cut(s)	1644, 1802
EcoO109I	RGGNCCY	1 cut(s)	1752
EcoO65I	GGTNACC	1 cut(s)	620
EcoRI	GAATTC	1 cut(s)	14
EcoRII	CCWGG	5 cut(s)	199, 552, 733, 1797, 2136
EcoRV	GATATC	1 cut(s)	550
EcoT14I	CCWWGG	2 cut(s)	1689, 2296
EcoT22I	ATGCAT	1 cut(s)	1847
ErhI	CCWWGG	2 cut(s)	1689, 2296
Esp3I	CGTCTC	3 cut(s)	966, 1289, 1511
FaqI	GGGAC	1 cut(s)	1965
FauNDI	CATATG	1 cut(s)	1847
FokI	GGATG	7 cut(s)	17, 891, 933, 1269, 1653, 1671, 2054
FspBI	CTAG	5 cut(s)	743, 1476, 2238, 2297, 2424
GlaI	GCGC	2 cut(s)	1785, 1792
GsuI	CTGGAG	1 cut(s)	1441
HaeIII	GGCC	6 cut(s)	24, 94, 198, 289, 741, 1542
HapII	CCGG	2 cut(s)	683, 844
HgaI	GACGC	1 cut(s)	431
HhaI	GCGC	2 cut(s)	1786, 1793
Hin6I	GCGC	2 cut(s)	1784, 1791
HinP1I	GCGC	2 cut(s)	1784, 1791
HindIII	AAGCTT	3 cut(s)	161, 2213, 2447
HpaII	CCGG	2 cut(s)	683, 844
HphI	GGTGA	5 cut(s)	527, 1245, 2080, 2139, 2152
Hpy166II	GTNNAC	6 cut(s)	332, 614, 676, 2262, 2345, 2458
Hpy8I	GTNNAC	6 cut(s)	332, 614, 676, 2262, 2345, 2458
Hpy99I	CGWCG	1 cut(s)	71
HpyAV	CCTTC	5 cut(s)	179, 584, 780, 960, 2503
HpyCH4III	ACNGT	5 cut(s)	545, 1300, 1717, 1899, 2094
HpyCH4IV	ACGT	1 cut(s)	1861
HpyF3I	CTNAG	5 cut(s)	53, 660, 965, 1257, 1779
HpySE526I	ACGT	1 cut(s)	1861
HspAI	GCGC	2 cut(s)	1784, 1791
Kpn2I	TCCGGA	1 cut(s)	682
Kzo9I	GATC	8 cut(s)	475, 712, 826, 1178, 1555, 1591, 1598, 2431
LmnI	GCTCC	6 cut(s)	493, 808, 1655, 1675, 1859, 1892
Lsp1109I	GCAGC	9 cut(s)	244, 247, 256, 259, 278, 478, 681, 869, 2269
LweI	GCATC	6 cut(s)	869, 1062, 1538, 1693, 2032, 2113
MabI	ACCWGGT	1 cut(s)	2136
MaeI	CTAG	5 cut(s)	743, 1476, 2238, 2297, 2424
MaeII	ACGT	1 cut(s)	1861
MaeIII	GTNAC	8 cut(s)	620, 846, 1029, 1424, 1629, 2021, 2145, 2385
MalI	GATC	8 cut(s)	477, 714, 828, 1180, 1557, 1593, 1600, 2433
MboI	GATC	8 cut(s)	475, 712, 826, 1178, 1555, 1591, 1598, 2431
MflI	RGATCY	1 cut(s)	712
MhlI	GDGCHC	5 cut(s)	212, 616, 1680, 1897, 2264
MlsI	TGGCCA	1 cut(s)	1542
MluNI	TGGCCA	1 cut(s)	1542
MlyI	GAGTC	4 cut(s)	857, 976, 2310, 2408
MmeI	TCCRAC	3 cut(s)	130, 1053, 1881
Mox20I	TGGCCA	1 cut(s)	1542
Mph1103I	ATGCAT	1 cut(s)	1847
MroI	TCCGGA	1 cut(s)	682
MroXI	GAANNNNTTC	4 cut(s)	769, 795, 1164, 2450
MscI	TGGCCA	1 cut(s)	1542
MseI	TTAA	7 cut(s)	357, 488, 816, 980, 1082, 2195, 2306
MslI	CAYNNNNRTG	3 cut(s)	1038, 1728, 1846
Msp20I	TGGCCA	1 cut(s)	1542
MspA1I	CMGCKG	4 cut(s)	103, 269, 694, 1199
MspCI	CTTAAG	1 cut(s)	2305
MspI	CCGG	2 cut(s)	683, 844
MspR9I	CCNGG	5 cut(s)	201, 554, 735, 1799, 2138
Mva1269I	GAATGC	1 cut(s)	1002
MvaI	CCWGG	5 cut(s)	201, 554, 735, 1799, 2138
MvnI	CGCG	1 cut(s)	2430
NdeI	CATATG	1 cut(s)	1847
NdeII	GATC	8 cut(s)	475, 712, 826, 1178, 1555, 1591, 1598, 2431
NlaIV	GGNNCC	3 cut(s)	495, 1651, 1855
NmuCI	GTSAC	3 cut(s)	2021, 2145, 2385
NruI	TCGCGA	1 cut(s)	2430
NsiI	ATGCAT	1 cut(s)	1847
NspI	RCATGY	1 cut(s)	1845
PaeI	GCATGC	1 cut(s)	1845
PaeR7I	CTCGAG	1 cut(s)	636
PaqCI	CACCTGC	1 cut(s)	1689
PceI	AGGCCT	1 cut(s)	741
PctI	GAATGC	1 cut(s)	1002
PdmI	GAANNNNTTC	4 cut(s)	769, 795, 1164, 2450
PfeI	GAWTC	9 cut(s)	74, 628, 1015, 1112, 1250, 1448, 1550, 1662, 2321
PflMI	CCANNNNNTGG	2 cut(s)	1175, 1672
Ple19I	CGATCG	1 cut(s)	2434
PleI	GAGTC	4 cut(s)	857, 975, 2309, 2408
PpsI	GAGTC	4 cut(s)	857, 975, 2309, 2408
PpuMI	RGGWCCY	1 cut(s)	1752
PshAI	GACNNNNGTC	1 cut(s)	110
Psp5II	RGGWCCY	1 cut(s)	1752
Psp6I	CCWGG	5 cut(s)	199, 552, 733, 1797, 2136
PspEI	GGTNACC	1 cut(s)	620
PspGI	CCWGG	5 cut(s)	199, 552, 733, 1797, 2136
PspN4I	GGNNCC	3 cut(s)	495, 1651, 1855
PspPI	GGNCC	3 cut(s)	23, 197, 1752
PspPPI	RGGWCCY	1 cut(s)	1752
PstI	CTGCAG	1 cut(s)	1608
PstNI	CAGNNNCTG	3 cut(s)	257, 272, 1175
PsuI	RGATCY	1 cut(s)	712
PvuI	CGATCG	1 cut(s)	2434
PvuII	CAGCTG	2 cut(s)	269, 694
RruI	TCGCGA	1 cut(s)	2430
RsaI	GTAC	5 cut(s)	1762, 2057, 2091, 2364, 2478
RsaNI	GTAC	5 cut(s)	1761, 2056, 2090, 2363, 2477
RseI	CAYNNNNRTG	3 cut(s)	1038, 1728, 1846
SaqAI	TTAA	7 cut(s)	357, 488, 816, 980, 1082, 2195, 2306
Sau3AI	GATC	8 cut(s)	475, 712, 826, 1178, 1555, 1591, 1598, 2431
Sau96I	GGNCC	3 cut(s)	23, 197, 1752
SchI	GAGTC	4 cut(s)	857, 976, 2310, 2408
ScrFI	CCNGG	5 cut(s)	201, 554, 735, 1799, 2138
SduI	GDGCHC	5 cut(s)	212, 616, 1680, 1897, 2264
SexAI	ACCWGGT	1 cut(s)	2136
SfaNI	GCATC	6 cut(s)	869, 1062, 1538, 1693, 2032, 2113
SfcI	CTRYAG	2 cut(s)	1604, 1756
Sfr274I	CTCGAG	1 cut(s)	636
SinI	GGWCC	1 cut(s)	1752
SlaI	CTCGAG	1 cut(s)	636
SmiMI	CAYNNNNRTG	3 cut(s)	1038, 1728, 1846
SmlI	CTYRAG	3 cut(s)	379, 636, 2305
SmoI	CTYRAG	3 cut(s)	379, 636, 2305
SphI	GCATGC	1 cut(s)	1845
SseBI	AGGCCT	1 cut(s)	741
SsiI	CCGC	5 cut(s)	95, 98, 101, 264, 1199
SspI	AATATT	3 cut(s)	572, 652, 1697
SspMI	CTAG	5 cut(s)	743, 1476, 2238, 2297, 2424
StuI	AGGCCT	1 cut(s)	741
StyD4I	CCNGG	5 cut(s)	199, 552, 733, 1797, 2136
StyI	CCWWGG	2 cut(s)	1689, 2296
TaaI	ACNGT	5 cut(s)	545, 1300, 1717, 1899, 2094
TaiI	ACGT	1 cut(s)	1864
TaqI	TCGA	8 cut(s)	69, 308, 510, 637, 1010, 1506, 2369, 2434
TaqII	GACCGA	1 cut(s)	100
TatI	WGTACW	4 cut(s)	1760, 2089, 2362, 2476
TauI	GCSGC	4 cut(s)	97, 100, 103, 266
TfiI	GAWTC	9 cut(s)	74, 628, 1015, 1112, 1250, 1448, 1550, 1662, 2321
Tru1I	TTAA	7 cut(s)	357, 488, 816, 980, 1082, 2195, 2306
Tru9I	TTAA	7 cut(s)	357, 488, 816, 980, 1082, 2195, 2306
TscAI	CASTG	6 cut(s)	1180, 1608, 1902, 1959, 1994, 2256
TseFI	GTSAC	3 cut(s)	2021, 2145, 2385
TseI	GCWGC	9 cut(s)	257, 260, 266, 269, 272, 466, 694, 882, 2282
Tsp45I	GTSAC	3 cut(s)	2021, 2145, 2385
TspGWI	ACGGA	4 cut(s)	248, 1535, 2043, 2330
TspRI	CASTG	6 cut(s)	1180, 1608, 1902, 1959, 1994, 2256
Van91I	CCANNNNNTGG	2 cut(s)	1175, 1672
Vha464I	CTTAAG	1 cut(s)	2305
VneI	GTGCAC	2 cut(s)	612, 2260
VpaK11BI	GGWCC	1 cut(s)	1752
XagI	CCTNNNNNAGG	2 cut(s)	1644, 1802
XapI	RAATTY	7 cut(s)	14, 120, 1141, 1164, 1223, 1489, 1772
XceI	RCATGY	1 cut(s)	1845
XhoI	CTCGAG	1 cut(s)	636
XmaJI	CCTAGG	1 cut(s)	2296
XmnI	GAANNNNTTC	4 cut(s)	769, 795, 1164, 2450
XspI	CTAG	5 cut(s)	743, 1476, 2238, 2297, 2424
Zsp2I	ATGCAT	1 cut(s)	1847

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.