Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004359.1

Orthogroup ID

OG0003032

Physical Location & Seq

Genomic Coordinates Forward (+)

165539 .. 173922

Gene Structure 8384 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004359.1_g000040.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ctgagaaccctcgtcgtcgtcgaagaatcatcagctttgttatggccgccgccgccgccgacttcgttctctgaaatttcgtttcctcctttggatttggcagtcggaggagggaagctttttagtatggataaaagtgaagggtcgggtggccctggttggggcacttcgcttttcatgcaaacaacggaagatgttgcaagagcagttgctgctgccgcagctgctgctactgccacacggccgtcagttgtatattcctcgaaagaagaagatggtggtagtccacttcaaagactacaacgccaatttaataaagtgctaaaaggtttctcaagtcctcctgaagtgaaaacaggaagaacttacaatccagaagttttgactagccagaagcgtcaatgggcaaactttcagttgcagcacttggatcataggtctttaaaggagccaacaaggcttttcgagagcatggtagttgtggggcttcaccctaactgtgatatccaggcactccaaaggcaatattttgcaagaaagtctgaaggtgcaggaaaattgcgaagtgcacttggtaaccagaatcaatctcgagtagaacccaatattgaacctcaggtgttattggtataccctccggaaaaacagctgcctcttcaatacaaggatctcatttcattttgcttcccaggaggcctagaggttcatgctgttgagagaactccttccatgagtgagttgaatgaacttcttttggggcaggagcattttaaacaaagcgatctgtcctttgtattccggttacaggttgctgatgactcaactttgtatggatgctgcgtgttagtggaagaattggtgcaaaaaccctctggattgctttccatgatttctgaaaaacatccttctcgcccgtctctgagtcgtcatatattaaccactcggagatgttattgcattctttcgaggattcctgcctttgagttacattttggtgtattgaatagcatcttcacagaagaaaggttggaacgattaacaaaaggtattggtcttttggatttagaatccccaaaggataatagaaatgatgaaaatttagaggaaaatacagaagaaattccagacactggatcactaaatggtagaacagcggacatggtaaatggcacagcagaattttgtcagacaagcctaaaagatgattcacctgagagagttgtcgttgttccaattcatcctgaaaccgagatggtcagttccaagataaaatcttgtgtggcaaatacagaagtttgtgaggtctatgctgatgatttctctacaaacaagcctgcttttgaaaggcgattaccaaatgctgttctacctctcttgcgttactatcagtatgaaagttctgattcttcctccagtcttcagggttctcctagtgaagacaggaattttaggagtgatgttgatgatatagagacggaagaggcatctttctccggccaagacgattctgatctcattgatattcttgaatgggcaaaggcaaacgatcatggatcactgcagataataagtgagtactaccagttacattgtcctgctagaggctccacaattagattccatcctttggagcacctgcatcccttggaatattatagaccagatgaaacagttttacatattggtggctcaaccattgatttgaggtcctgtagtacaagtctggaatttgctgaggcgcacagcgcactcctggctgaggaggaagcaactgcattatcagtatgggctattgcatgcatatgtggctccttacgtcttgaaaatgtattagcaatgtttgcaggagcactgttggagaagcaaattgtaattatttgttccaatttgggtatcttatctgcttcagtgttgtccattatccctctaattcgtccctaccagtggcaaagcctactaatgccagtcttaccaagtgacatgatggactttttggatgcacctgttccgtacatagttggggtgaagaacaaaacacatgaagtacagtccaaactatctaatgtaattctggttgatgccaacaagaaccaggtgaagtcaccaacaatacctcatttgccacaacatcgggaattattttcagcattaagtccttatcatgcaaagcttgtgggagagagttttttggctaggaaaaggccagtgtatgagtgcacagatgaacaggttgaagctgccaaaggttttctaggagtcttaagaacttacttggattctctttgctctaatctccgttcacacacaattacaaatgtacaatcgaatgacgataaggtgtcgctacttctgaaagagagtttcattgactcatttcctagtcgtgatcggccatttatgaagcttttcgtggacacccaactcttttctgtacatacagaccttgttctctctttcttccagaaggaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DENN uDENN

Protein Analysis

823

Amino Acids

91.76

Weight (kDa)

5.26

Isoelectric Point (pI)

53.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35560 AT5G35560
fragaria_vesca	FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450
malus_domestica	MD00G1142500.v1.1 MD02G1088900.v1.1 MD02G1089000.v1.1 MD15G1216100.v1.1
prunus_persica	Prupe.7G200900_v2.0.a1 Prupe.7G200900_v2.0.a1 Prupe.7G200900_v2.0.a1
pyrus_communis	pycom15g19170
rosa_chinensis	RchiOBHm_Chr2g0094551
rosa_laevigata	RLG00000016501
rosa_multiflora	Rmu_sc0004359.1_g000040
rosa_roxburghii	Rroxscaffold_2G00147070
rosa_rugosa	Rorug02G0044800 Rorug02G0044900 Rorug02G0045000 Rorug02G0045100 Rorug02G0045100 Rorug02G0045100
rosa_samantha	Rh2AG093000 Rh2BG093300 Rh2CG095700 Rh2DG092100
rosa_wichuraiana	Rw7G039010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1644
Acc36I	ACCTGC	1 cut(s)	1644
AccB7I	CCANNNNNTGG	2 cut(s)	1130, 1627
AccI	GTMKAC	1 cut(s)	630
AccIII	TCCGGA	1 cut(s)	637
AciI	CCGC	6 cut(s)	47, 50, 53, 56, 219, 1154
AclWI	GGATC	4 cut(s)	438, 675, 1141, 1561
AcoI	YGGCCR	4 cut(s)	44, 242, 1495, 2390
AcsI	RAATTY	6 cut(s)	75, 1096, 1119, 1178, 1444, 1727
AcuI	CTGAAG	4 cut(s)	366, 564, 1403, 1890
AfaI	GTAC	6 cut(s)	1577, 1717, 2012, 2046, 2319, 2433
AfiI	CCNNNNNNNGG	8 cut(s)	160, 161, 805, 1130, 1601, 1627, 1759, 1944
AflII	CTTAAG	1 cut(s)	2260
AgsI	TTSAA	9 cut(s)	293, 611, 659, 742, 1003, 1343, 1529, 1823, 2234
AjnI	CCWGG	5 cut(s)	154, 507, 688, 1752, 2091
AloI	GAACNNNNNNTCC	2 cut(s)	355, 387
AluBI	AGCT	7 cut(s)	35, 118, 224, 649, 2170, 2237, 2404
AluI	AGCT	7 cut(s)	35, 118, 224, 649, 2170, 2237, 2404
Alw21I	GWGCWC	4 cut(s)	571, 1635, 1852, 2219
Alw26I	GTCTC	2 cut(s)	921, 1466
Alw44I	GTGCAC	2 cut(s)	567, 2215
AlwI	GGATC	4 cut(s)	438, 675, 1141, 1561
AlwNI	CAGNNNCTG	3 cut(s)	212, 227, 1130
Ama87I	CYCGRG	1 cut(s)	591
Aor13HI	TCCGGA	1 cut(s)	637
AoxI	GGCC	7 cut(s)	44, 151, 242, 694, 1495, 2201, 2390
ApaLI	GTGCAC	2 cut(s)	567, 2215
ApeKI	GCWGC	9 cut(s)	212, 215, 221, 224, 227, 421, 649, 837, 2237
ApoI	RAATTY	6 cut(s)	75, 1096, 1119, 1178, 1444, 1727
Asp700I	GAANNNNTTC	3 cut(s)	724, 1119, 2405
AspLEI	GCGC	2 cut(s)	1741, 1748
AspS9I	GGNCC	2 cut(s)	152, 1707
AsuHPI	GGTGA	5 cut(s)	482, 1200, 2035, 2094, 2107
AvaI	CYCGRG	1 cut(s)	591
AvaII	GGWCC	1 cut(s)	1707
AxyI	CCTNAGG	1 cut(s)	615
BaeGI	GKGCMC	3 cut(s)	167, 571, 2219
BbsI	GAAGAC	2 cut(s)	1409, 1443
Bbv12I	GWGCWC	4 cut(s)	571, 1635, 1852, 2219
BbvCI	CCTCAGC	2 cut(s)	1734, 1758
BbvI	GCAGC	9 cut(s)	199, 202, 211, 214, 233, 433, 636, 824, 2224
BccI	CCATC	4 cut(s)	269, 1246, 1629, 1978
BceAI	ACGGC	2 cut(s)	229, 257
BciT130I	CCWGG	5 cut(s)	156, 509, 690, 1754, 2093
BcoDI	GTCTC	2 cut(s)	921, 1466
BfaI	CTAG	7 cut(s)	387, 698, 1431, 1599, 2193, 2252, 2379
BfmI	CTRYAG	2 cut(s)	1559, 1711
BfrI	CTTAAG	1 cut(s)	2260
BfuAI	ACCTGC	1 cut(s)	1644
BglI	GCCNNNNNGGC	1 cut(s)	457
BmcAI	AGTACT	1 cut(s)	1577
Bme1390I	CCNGG	5 cut(s)	156, 509, 690, 1754, 2093
Bme18I	GGWCC	1 cut(s)	1707
BmeT110I	CYCGRG	1 cut(s)	591
BmgT120I	GGNCC	2 cut(s)	152, 1707
BmiI	GGNNCC	3 cut(s)	450, 1606, 1810
BmrFI	CCNGG	5 cut(s)	156, 509, 690, 1754, 2093
BmsI	GCATC	6 cut(s)	824, 1017, 1493, 1648, 1987, 2068
BpiI	GAAGAC	2 cut(s)	1409, 1443
BpmI	CTGGAG	1 cut(s)	1396
Bpu10I	CCTNAGC	2 cut(s)	1734, 1758
BpuEI	CTTGAG	1 cut(s)	319
BsaBI	GATNNNNATC	1 cut(s)	1509
BsaJI	CCNNGG	3 cut(s)	154, 688, 1644
BsaWI	WCCGGW	2 cut(s)	637, 798
Bsc4I	CCNNNNNNNGG	8 cut(s)	160, 161, 805, 1130, 1601, 1627, 1759, 1944
Bse1I	ACTGG	6 cut(s)	1135, 1413, 1582, 1942, 1964, 2204
Bse21I	CCTNAGG	1 cut(s)	615
Bse3DI	GCAATG	1 cut(s)	1842
Bse8I	GATNNNNATC	1 cut(s)	1509
BseAI	TCCGGA	1 cut(s)	637
BseBI	CCWGG	5 cut(s)	156, 509, 690, 1754, 2093
BseDI	CCNNGG	3 cut(s)	154, 688, 1644
BseGI	GGATG	6 cut(s)	839, 901, 1237, 1621, 1639, 2002
BseJI	GATNNNNATC	1 cut(s)	1509
BseLI	CCNNNNNNNGG	8 cut(s)	160, 161, 805, 1130, 1601, 1627, 1759, 1944
BseMI	GCAATG	1 cut(s)	1842
BseMII	CTCAG	5 cut(s)	629, 911, 1203, 1725, 1749
BseNI	ACTGG	6 cut(s)	1135, 1413, 1582, 1942, 1964, 2204
BseRI	GAGGAG	2 cut(s)	123, 1775
BseSI	GKGCMC	3 cut(s)	167, 571, 2219
BseX3I	CGGCCG	1 cut(s)	242
BseXI	GCAGC	9 cut(s)	199, 202, 211, 214, 233, 433, 636, 824, 2224
BsgI	GTGCAG	1 cut(s)	570
Bsh1285I	CGRYCG	1 cut(s)	245
BshFI	GGCC	7 cut(s)	46, 153, 244, 696, 1497, 2203, 2392
BsiEI	CGRYCG	1 cut(s)	245
BsiHKAI	GWGCWC	4 cut(s)	571, 1635, 1852, 2219
BsiHKCI	CYCGRG	1 cut(s)	591
BsiSI	CCGG	3 cut(s)	638, 799, 1494
BslFI	GGGAC	1 cut(s)	1920
BslI	CCNNNNNNNGG	8 cut(s)	160, 161, 805, 1130, 1601, 1627, 1759, 1944
BsmAI	GTCTC	2 cut(s)	921, 1466
BsmBI	CGTCTC	2 cut(s)	921, 1466
BsmFI	GGGAC	1 cut(s)	1920
BsmI	GAATGC	1 cut(s)	957
BsnI	GGCC	7 cut(s)	46, 153, 244, 696, 1497, 2203, 2392
BsoBI	CYCGRG	1 cut(s)	591
Bsp1286I	GDGCHC	5 cut(s)	167, 571, 1635, 1852, 2219
Bsp13I	TCCGGA	1 cut(s)	637
Bsp1407I	TGTACA	2 cut(s)	2317, 2431
Bsp143I	GATC	8 cut(s)	430, 667, 781, 1133, 1510, 1546, 1553, 2386
BspACI	CCGC	6 cut(s)	47, 50, 53, 56, 219, 1154
BspANI	GGCC	7 cut(s)	46, 153, 244, 696, 1497, 2203, 2392
BspCNI	CTCAG	5 cut(s)	628, 912, 1204, 1726, 1750
BspEI	TCCGGA	1 cut(s)	637
BspLI	GGNNCC	3 cut(s)	450, 1606, 1810
BspMAI	CTGCAG	1 cut(s)	1563
BspMI	ACCTGC	1 cut(s)	1644
BspPI	GGATC	4 cut(s)	438, 675, 1141, 1561
BspTI	CTTAAG	1 cut(s)	2260
BsrDI	GCAATG	1 cut(s)	1842
BsrGI	TGTACA	2 cut(s)	2317, 2431
BsrI	ACTGG	6 cut(s)	1135, 1413, 1582, 1942, 1964, 2204
BssECI	CCNNGG	3 cut(s)	154, 688, 1644
BssMI	GATC	8 cut(s)	430, 667, 781, 1133, 1510, 1546, 1553, 2386
BssNAI	GTATAC	1 cut(s)	631
BssT1I	CCWWGG	1 cut(s)	1644
Bst1107I	GTATAC	1 cut(s)	631
Bst2UI	CCWGG	5 cut(s)	156, 509, 690, 1754, 2093
Bst4CI	ACNGT	4 cut(s)	500, 1672, 1854, 2049
Bst6I	CTCTTC	2 cut(s)	660, 1473
BstAFI	CTTAAG	1 cut(s)	2260
BstAPI	GCANNNNNTGC	3 cut(s)	212, 227, 1841
BstAUI	TGTACA	2 cut(s)	2317, 2431
BstC8I	GCNNGC	2 cut(s)	1335, 1798
BstDEI	CTNAG	6 cut(s)	2, 615, 920, 1212, 1734, 1758
BstEII	GGTNACC	1 cut(s)	575
BstENI	CCTNNNNNAGG	2 cut(s)	1599, 1757
BstF5I	GGATG	6 cut(s)	839, 901, 1237, 1621, 1639, 2002
BstHHI	GCGC	2 cut(s)	1741, 1748
BstKTI	GATC	8 cut(s)	433, 670, 784, 1136, 1513, 1549, 1556, 2389
BstMAI	GTCTC	2 cut(s)	921, 1466
BstMBI	GATC	8 cut(s)	430, 667, 781, 1133, 1510, 1546, 1553, 2386
BstMCI	CGRYCG	1 cut(s)	245
BstNI	CCWGG	5 cut(s)	156, 509, 690, 1754, 2093
BstNSI	RCATGY	1 cut(s)	1800
BstPI	GGTNACC	1 cut(s)	575
BstSCI	CCNGG	5 cut(s)	154, 507, 688, 1752, 2091
BstSFI	CTRYAG	2 cut(s)	1559, 1711
BstSLI	GKGCMC	3 cut(s)	167, 571, 2219
BstV1I	GCAGC	9 cut(s)	199, 202, 211, 214, 233, 433, 636, 824, 2224
BstV2I	GAAGAC	2 cut(s)	1409, 1443
BstX2I	RGATCY	1 cut(s)	667
BstYI	RGATCY	1 cut(s)	667
BstZ17I	GTATAC	1 cut(s)	631
BstZI	CGGCCG	1 cut(s)	242
Bsu36I	CCTNAGG	1 cut(s)	615
BsuRI	GGCC	7 cut(s)	46, 153, 244, 696, 1497, 2203, 2392
BtsCI	GGATG	6 cut(s)	839, 901, 1237, 1621, 1639, 2002
BtsI	GCAGTG	1 cut(s)	1556
BtsIMutI	CAGTG	6 cut(s)	1128, 1556, 1850, 1914, 1949, 2211
BveI	ACCTGC	1 cut(s)	1644
Cac8I	GCNNGC	2 cut(s)	1335, 1798
CaiI	CAGNNNCTG	3 cut(s)	212, 227, 1130
CfoI	GCGC	2 cut(s)	1741, 1748
Cfr13I	GGNCC	2 cut(s)	152, 1707
CseI	GACGC	1 cut(s)	386
CsiI	ACCWGGT	1 cut(s)	2091
Csp6I	GTAC	6 cut(s)	1576, 1716, 2011, 2045, 2318, 2432
CspCI	CAANNNNNGTGG	2 cut(s)	2154, 2189
CviQI	GTAC	6 cut(s)	1576, 1716, 2011, 2045, 2318, 2432
DdeI	CTNAG	6 cut(s)	2, 615, 920, 1212, 1734, 1758
DpnI	GATC	8 cut(s)	432, 669, 783, 1135, 1512, 1548, 1555, 2388
DpnII	GATC	8 cut(s)	430, 667, 781, 1133, 1510, 1546, 1553, 2386
DraI	TTTAAA	2 cut(s)	444, 772
EaeI	YGGCCR	4 cut(s)	44, 242, 1495, 2390
EagI	CGGCCG	1 cut(s)	242
Eam1104I	CTCTTC	2 cut(s)	660, 1473
EarI	CTCTTC	2 cut(s)	660, 1473
EclXI	CGGCCG	1 cut(s)	242
Eco130I	CCWWGG	1 cut(s)	1644
Eco147I	AGGCCT	1 cut(s)	696
Eco32I	GATATC	1 cut(s)	505
Eco47I	GGWCC	1 cut(s)	1707
Eco52I	CGGCCG	1 cut(s)	242
Eco57I	CTGAAG	4 cut(s)	366, 564, 1403, 1890
Eco81I	CCTNAGG	1 cut(s)	615
Eco88I	CYCGRG	1 cut(s)	591
Eco91I	GGTNACC	1 cut(s)	575
EcoNI	CCTNNNNNAGG	2 cut(s)	1599, 1757
EcoO109I	RGGNCCY	1 cut(s)	1707
EcoO65I	GGTNACC	1 cut(s)	575
EcoRII	CCWGG	5 cut(s)	154, 507, 688, 1752, 2091
EcoRV	GATATC	1 cut(s)	505
EcoT14I	CCWWGG	1 cut(s)	1644
EcoT22I	ATGCAT	1 cut(s)	1802
ErhI	CCWWGG	1 cut(s)	1644
Esp3I	CGTCTC	2 cut(s)	921, 1466
FaqI	GGGAC	1 cut(s)	1920
FauNDI	CATATG	1 cut(s)	1802
FblI	GTMKAC	1 cut(s)	630
FokI	GGATG	6 cut(s)	846, 888, 1224, 1608, 1626, 2009
FspBI	CTAG	7 cut(s)	387, 698, 1431, 1599, 2193, 2252, 2379
GlaI	GCGC	2 cut(s)	1740, 1747
GsuI	CTGGAG	1 cut(s)	1396
HaeIII	GGCC	7 cut(s)	46, 153, 244, 696, 1497, 2203, 2392
HapII	CCGG	3 cut(s)	638, 799, 1494
HgaI	GACGC	1 cut(s)	386
HhaI	GCGC	2 cut(s)	1741, 1748
Hin6I	GCGC	2 cut(s)	1739, 1746
HinP1I	GCGC	2 cut(s)	1739, 1746
HindIII	AAGCTT	3 cut(s)	116, 2168, 2402
HpaII	CCGG	3 cut(s)	638, 799, 1494
HphI	GGTGA	5 cut(s)	482, 1200, 2035, 2094, 2107
Hpy166II	GTNNAC	6 cut(s)	287, 569, 631, 2217, 2300, 2413
Hpy8I	GTNNAC	6 cut(s)	287, 569, 631, 2217, 2300, 2413
Hpy99I	CGWCG	3 cut(s)	17, 20, 23
HpyAV	CCTTC	5 cut(s)	134, 539, 735, 915, 2458
HpyCH4III	ACNGT	4 cut(s)	500, 1672, 1854, 2049
HpyCH4IV	ACGT	1 cut(s)	1816
HpyF3I	CTNAG	6 cut(s)	2, 615, 920, 1212, 1734, 1758
HpySE526I	ACGT	1 cut(s)	1816
HspAI	GCGC	2 cut(s)	1739, 1746
Kpn2I	TCCGGA	1 cut(s)	637
Kzo9I	GATC	8 cut(s)	430, 667, 781, 1133, 1510, 1546, 1553, 2386
LmnI	GCTCC	6 cut(s)	448, 763, 1610, 1630, 1814, 1847
Lsp1109I	GCAGC	9 cut(s)	199, 202, 211, 214, 233, 433, 636, 824, 2224
LweI	GCATC	6 cut(s)	824, 1017, 1493, 1648, 1987, 2068
MabI	ACCWGGT	1 cut(s)	2091
MaeI	CTAG	7 cut(s)	387, 698, 1431, 1599, 2193, 2252, 2379
MaeII	ACGT	1 cut(s)	1816
MaeIII	GTNAC	7 cut(s)	575, 801, 984, 1379, 1584, 1976, 2100
MalI	GATC	8 cut(s)	432, 669, 783, 1135, 1512, 1548, 1555, 2388
MboI	GATC	8 cut(s)	430, 667, 781, 1133, 1510, 1546, 1553, 2386
MflI	RGATCY	1 cut(s)	667
MhlI	GDGCHC	5 cut(s)	167, 571, 1635, 1852, 2219
MlyI	GAGTC	4 cut(s)	812, 931, 2265, 2363
MmeI	TCCRAC	3 cut(s)	85, 1008, 1836
Mph1103I	ATGCAT	1 cut(s)	1802
MroI	TCCGGA	1 cut(s)	637
MroXI	GAANNNNTTC	3 cut(s)	724, 1119, 2405
MseI	TTAA	7 cut(s)	312, 443, 771, 935, 1037, 2150, 2261
MslI	CAYNNNNRTG	3 cut(s)	993, 1683, 1801
MspA1I	CMGCKG	3 cut(s)	224, 649, 1154
MspCI	CTTAAG	1 cut(s)	2260
MspI	CCGG	3 cut(s)	638, 799, 1494
MspR9I	CCNGG	5 cut(s)	156, 509, 690, 1754, 2093
Mva1269I	GAATGC	1 cut(s)	957
MvaI	CCWGG	5 cut(s)	156, 509, 690, 1754, 2093
NdeI	CATATG	1 cut(s)	1802
NdeII	GATC	8 cut(s)	430, 667, 781, 1133, 1510, 1546, 1553, 2386
NlaIV	GGNNCC	3 cut(s)	450, 1606, 1810
NmuCI	GTSAC	2 cut(s)	1976, 2100
NsiI	ATGCAT	1 cut(s)	1802
NspI	RCATGY	1 cut(s)	1800
PaeI	GCATGC	1 cut(s)	1800
PaeR7I	CTCGAG	1 cut(s)	591
PaqCI	CACCTGC	1 cut(s)	1644
PceI	AGGCCT	1 cut(s)	696
PcsI	WCGNNNNNNNCGW	1 cut(s)	18
PctI	GAATGC	1 cut(s)	957
PdmI	GAANNNNTTC	3 cut(s)	724, 1119, 2405
PfeI	GAWTC	9 cut(s)	26, 583, 970, 1067, 1205, 1403, 1505, 1617, 2276
PflMI	CCANNNNNTGG	2 cut(s)	1130, 1627
PleI	GAGTC	4 cut(s)	812, 930, 2264, 2363
PpsI	GAGTC	4 cut(s)	812, 930, 2264, 2363
PpuMI	RGGWCCY	1 cut(s)	1707
Psp5II	RGGWCCY	1 cut(s)	1707
Psp6I	CCWGG	5 cut(s)	154, 507, 688, 1752, 2091
PspEI	GGTNACC	1 cut(s)	575
PspGI	CCWGG	5 cut(s)	154, 507, 688, 1752, 2091
PspN4I	GGNNCC	3 cut(s)	450, 1606, 1810
PspPI	GGNCC	2 cut(s)	152, 1707
PspPPI	RGGWCCY	1 cut(s)	1707
PstI	CTGCAG	1 cut(s)	1563
PstNI	CAGNNNCTG	3 cut(s)	212, 227, 1130
PsuI	RGATCY	1 cut(s)	667
PvuII	CAGCTG	2 cut(s)	224, 649
RsaI	GTAC	6 cut(s)	1577, 1717, 2012, 2046, 2319, 2433
RsaNI	GTAC	6 cut(s)	1576, 1716, 2011, 2045, 2318, 2432
RseI	CAYNNNNRTG	3 cut(s)	993, 1683, 1801
SaqAI	TTAA	7 cut(s)	312, 443, 771, 935, 1037, 2150, 2261
Sau3AI	GATC	8 cut(s)	430, 667, 781, 1133, 1510, 1546, 1553, 2386
Sau96I	GGNCC	2 cut(s)	152, 1707
ScaI	AGTACT	1 cut(s)	1577
SchI	GAGTC	4 cut(s)	812, 931, 2265, 2363
ScrFI	CCNGG	5 cut(s)	156, 509, 690, 1754, 2093
SduI	GDGCHC	5 cut(s)	167, 571, 1635, 1852, 2219
SexAI	ACCWGGT	1 cut(s)	2091
SfaNI	GCATC	6 cut(s)	824, 1017, 1493, 1648, 1987, 2068
SfcI	CTRYAG	2 cut(s)	1559, 1711
Sfr274I	CTCGAG	1 cut(s)	591
SinI	GGWCC	1 cut(s)	1707
SlaI	CTCGAG	1 cut(s)	591
SmiMI	CAYNNNNRTG	3 cut(s)	993, 1683, 1801
SmlI	CTYRAG	3 cut(s)	334, 591, 2260
SmoI	CTYRAG	3 cut(s)	334, 591, 2260
SphI	GCATGC	1 cut(s)	1800
SseBI	AGGCCT	1 cut(s)	696
SsiI	CCGC	6 cut(s)	47, 50, 53, 56, 219, 1154
SspI	AATATT	3 cut(s)	527, 607, 1652
SspMI	CTAG	7 cut(s)	387, 698, 1431, 1599, 2193, 2252, 2379
StuI	AGGCCT	1 cut(s)	696
StyD4I	CCNGG	5 cut(s)	154, 507, 688, 1752, 2091
StyI	CCWWGG	1 cut(s)	1644
TaaI	ACNGT	4 cut(s)	500, 1672, 1854, 2049
TaiI	ACGT	1 cut(s)	1819
TaqI	TCGA	6 cut(s)	21, 263, 465, 592, 965, 2324
TatI	WGTACW	5 cut(s)	1575, 1715, 2044, 2317, 2431
TauI	GCSGC	5 cut(s)	49, 52, 55, 58, 221
TfiI	GAWTC	9 cut(s)	26, 583, 970, 1067, 1205, 1403, 1505, 1617, 2276
Tru1I	TTAA	7 cut(s)	312, 443, 771, 935, 1037, 2150, 2261
Tru9I	TTAA	7 cut(s)	312, 443, 771, 935, 1037, 2150, 2261
TscAI	CASTG	6 cut(s)	1135, 1563, 1857, 1914, 1949, 2211
TseFI	GTSAC	2 cut(s)	1976, 2100
TseI	GCWGC	9 cut(s)	212, 215, 221, 224, 227, 421, 649, 837, 2237
Tsp45I	GTSAC	2 cut(s)	1976, 2100
TspGWI	ACGGA	4 cut(s)	203, 1490, 1998, 2285
TspRI	CASTG	6 cut(s)	1135, 1563, 1857, 1914, 1949, 2211
Van91I	CCANNNNNTGG	2 cut(s)	1130, 1627
Vha464I	CTTAAG	1 cut(s)	2260
VneI	GTGCAC	2 cut(s)	567, 2215
VpaK11BI	GGWCC	1 cut(s)	1707
XagI	CCTNNNNNAGG	2 cut(s)	1599, 1757
XapI	RAATTY	6 cut(s)	75, 1096, 1119, 1178, 1444, 1727
XceI	RCATGY	1 cut(s)	1800
XhoI	CTCGAG	1 cut(s)	591
XmiI	GTMKAC	1 cut(s)	630
XmnI	GAANNNNTTC	3 cut(s)	724, 1119, 2405
XspI	CTAG	7 cut(s)	387, 698, 1431, 1599, 2193, 2252, 2379
ZrmI	AGTACT	1 cut(s)	1577
Zsp2I	ATGCAT	1 cut(s)	1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.