Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003032

Physical Location & Seq

Genomic Coordinates Forward (+)

84993803 .. 85004517

Gene Structure 10715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00147070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGATAAAAGTGAAGGGTCGGGTGGCCCTGGTTGGGGCACTTCGCTTTTCATGCAAACAACGGAAGATGTTGCAAGAGCAGTTGCTGCTGCCGCGGCTGCTGCTACTGCCACACGGCCGTCAGTTGTATATTCCTTGAAAGAAGAAGATGGTGGTAGTCCACTTCAAAGACTACAACGCCAATTTAATAAAGTGCTAAAAGGCTTCTCAAGTCCTCCTGAAGTGAAAACAGGAAGAACTTACAATCCAGAAGTTTTGACTAGCCAGAAGCGTCAATGGGCAAACGTTCAGTTGCAGCACTTGGATCATAGGTCTTTAAAGGAGCCAACAAGGCTTTTCGAGAGCATCGTAGTTGTGGGGCTTCACCCTAACTGTGATATCCAGGCACTCCAAAGGCAATATTTTGCAAGAAAGTCTGAAGGTGCAGGAAAATTGCGAAGTGCACTTGGTAACCAGAATCAATCTCGAGTAGAACCCAATATTGAACCTCAGGTGTTATTGGTTTACCCTCCGGAAAAACAGCTGCCTCTTCAATACAAGGATCTCATTTCATTTTGCTTCCCAGGAGGCCTAGAGGTTCATGCTGTTGAGAGAACTCCTTCCATGAGTGAGTTGAATGAACTTCTTCTGGGGCAGGAGCATTTTAAACAAAGCGATCTGTCCTTTGTATTCCGGTTACAGGTTGCTGATGACTCAACTCTGTATGGATGCTGCGTGTTAGTGGAAGAATTGGTGCAAAAACCCTCTGGATTGCTTTCCATGATTTCTGAAAAACATCCTTCTCGCCCGTCTCTGAGTCGTCATATATTAACCACTCGGAGATGTTATTGCATTCTTTCGAGGATTCCTGCCTTTGAGTTACATTTTGGTGTATTGAATAGCATCTTCACAGAAGAAAGGTTGGAACGATTAACAAAAGGTATTGGTCTTTTGGATTTAGAATCCCCAAAGGATAATAGAAATGATGAAAATTTAGAGGAAAATACAGAAGAAATTCCAGACACTGGATCACTAAATAGTAGAACAGCAGACATGGTAAATGGCACAGCAGAATTTTGTCAGACAAGCCTAAAAGATGATTCACCTGAGAGAGTTGTTGTTGTTCCAATTCATCCTGAAACCGAGATGGTCAGTTCCAAGATAAAATCTTGTGTGGCAAATACAGAAGTTTGTGAGGTCTATGCTGATGATTTCTCTACAAACAAGCCTGCTTTTGAAAGGCGATTACCAAATGCTGTTCTACCTCTCTTGCGTTACTATCAGTATGAAAGTTCTGATTCTTCCTCCAGTGTTTTATGCAGTCTTCAGGGTTCTCCTAGTGAAGACAGGAATTTTAGGAGTGATGTCGATGATATAGAGACGGAAGAGGCATCTTTCTCCGGCCAAGACGATTCTGATCTCATTGATATTCTTGAATGGGCAAAGGCAAACGATCATGGATCACTGCAGATAATAAGTGAGTACTACCAGTTACATTGTCCTGCCAGAGGCTCCACAATTAGATTCCATCCTTTGGAGCACCTGCATCCCTTGGAATATTATAGACCAGATGAAACAGTTTTACATATTGGTGGCTCAACCATTGATTTGAGGTCCTGTAGTACAAGTCTGGAATTTGCTGAGGCGCACAGCGCACTCCTGGCAGAGGAGGAAGCAACTGCATTATCAGTATGGGCTATTGCATGCATATGTGGCTCCTTACGTCTTGAAAATGTATTAGCAATGTTTGCAGGAGCACTGTTGGAGAAGCAAATTGTAATTATTTGTTCCAATTTGGGTATCTTATCTGCTTCAGTGTTGTCCATTATCCCTCTAATTCGTCCCTACCAGTGGCAAAGCCTACTAATGCCAGTTTTACCAAGTGACATGATGGACTTTTTGGATGCACCTGTTCCGTACATAGTTGGGGTGAAGAACAAAACACATGAAGTACAGTCCAAACTATCTAATGTGATTCTGGTTGATGCCAACAAGAACCAGGTGAAGTCACCAACAATACCTCATTTGCCACAACATCGGGAATTATTTTCAGCATTAAGTCCTTATCATGCAAAGCTTGTGGGAGAGAGTTTTTTGGCTAGGAAAAGACCAGTGTATGAGTGCACAGATGAACAGGTTGAAGCTGCCAAAGGTTTCCTAGGAGTCTTAAGAACTTACTTGGATTCTCTTTGCTCTAATCTCCGTTCACACACAATTACAAATGTACAATCGAATGACGATAAGGCACCCAACTCTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DENN uDENN

Protein Analysis

746

Amino Acids

82.97

Weight (kDa)

5.29

Isoelectric Point (pI)

54.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
uDENN	PF03456	163 - 240	3.5e-07	uDENN domain
DENN	PF02141	556 - 658	1.6e-23	DENN (AEX-3) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35560 AT5G35560
fragaria_vesca	FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450 FvH4_1g08450
malus_domestica	MD00G1142500.v1.1 MD02G1088900.v1.1 MD02G1089000.v1.1 MD15G1216100.v1.1
prunus_persica	Prupe.7G200900_v2.0.a1 Prupe.7G200900_v2.0.a1 Prupe.7G200900_v2.0.a1
pyrus_communis	pycom15g19170
rosa_chinensis	RchiOBHm_Chr2g0094551
rosa_laevigata	RLG00000016501
rosa_multiflora	Rmu_sc0004359.1_g000040
rosa_roxburghii	Rroxscaffold_2G00147070
rosa_rugosa	Rorug02G0044800 Rorug02G0044900 Rorug02G0045000 Rorug02G0045100 Rorug02G0045100 Rorug02G0045100
rosa_samantha	Rh2AG093000 Rh2BG093300 Rh2CG095700 Rh2DG092100
rosa_wichuraiana	Rw7G039010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1530
Acc36I	ACCTGC	1 cut(s)	1530
AccB1I	GGYRCC	1 cut(s)	2224
AccB7I	CCANNNNNTGG	2 cut(s)	1004, 1513
AccII	CGCG	1 cut(s)	95
AccIII	TCCGGA	1 cut(s)	511
AciI	CCGC	2 cut(s)	93, 95
AclI	AACGTT	1 cut(s)	285
AclWI	GGATC	4 cut(s)	312, 549, 1015, 1447
AcoI	YGGCCR	2 cut(s)	116, 1381
AcsI	RAATTY	5 cut(s)	970, 993, 1052, 1330, 1613
AcuI	CTGAAG	4 cut(s)	240, 438, 1289, 1776
AfaI	GTAC	5 cut(s)	1463, 1603, 1898, 1932, 2205
AfiI	CCNNNNNNNGG	8 cut(s)	34, 35, 679, 1004, 1487, 1513, 1645, 1830
AflII	CTTAAG	1 cut(s)	2146
AjnI	CCWGG	5 cut(s)	28, 381, 562, 1638, 1977
AloI	GAACNNNNNNTCC	2 cut(s)	229, 261
AluBI	AGCT	3 cut(s)	523, 2056, 2123
AluI	AGCT	3 cut(s)	523, 2056, 2123
Alw21I	GWGCWC	4 cut(s)	445, 1521, 1738, 2105
Alw26I	GTCTC	2 cut(s)	795, 1352
Alw44I	GTGCAC	2 cut(s)	441, 2101
AlwI	GGATC	4 cut(s)	312, 549, 1015, 1447
AlwNI	CAGNNNCTG	2 cut(s)	86, 1004
Ama87I	CYCGRG	1 cut(s)	465
Aor13HI	TCCGGA	1 cut(s)	511
AoxI	GGCC	4 cut(s)	25, 116, 568, 1381
ApaLI	GTGCAC	2 cut(s)	441, 2101
ApeKI	GCWGC	8 cut(s)	86, 89, 98, 101, 295, 523, 711, 2123
ApoI	RAATTY	5 cut(s)	970, 993, 1052, 1330, 1613
Asp700I	GAANNNNTTC	3 cut(s)	598, 624, 993
AspA2I	CCTAGG	1 cut(s)	2137
AspLEI	GCGC	2 cut(s)	1627, 1634
AspS9I	GGNCC	2 cut(s)	26, 1593
AsuHPI	GGTGA	5 cut(s)	356, 1074, 1921, 1980, 1993
AvaI	CYCGRG	1 cut(s)	465
AvaII	GGWCC	1 cut(s)	1593
AvrII	CCTAGG	1 cut(s)	2137
AxyI	CCTNAGG	1 cut(s)	489
BaeGI	GKGCMC	3 cut(s)	41, 445, 2105
BanI	GGYRCC	1 cut(s)	2224
BbsI	GAAGAC	2 cut(s)	1295, 1329
Bbv12I	GWGCWC	4 cut(s)	445, 1521, 1738, 2105
BbvCI	CCTCAGC	1 cut(s)	1620
BbvI	GCAGC	8 cut(s)	73, 76, 85, 88, 307, 510, 698, 2110
BccI	CCATC	4 cut(s)	143, 1120, 1515, 1864
BceAI	ACGGC	2 cut(s)	103, 131
BciT130I	CCWGG	5 cut(s)	30, 383, 564, 1640, 1979
BcoDI	GTCTC	2 cut(s)	795, 1352
BfaI	CTAG	5 cut(s)	261, 572, 1317, 2079, 2138
BfmI	CTRYAG	2 cut(s)	1445, 1597
BfrI	CTTAAG	1 cut(s)	2146
BfuAI	ACCTGC	1 cut(s)	1530
BglI	GCCNNNNNGGC	1 cut(s)	331
BlnI	CCTAGG	1 cut(s)	2137
BmcAI	AGTACT	1 cut(s)	1463
Bme1390I	CCNGG	5 cut(s)	30, 383, 564, 1640, 1979
Bme18I	GGWCC	1 cut(s)	1593
BmeT110I	CYCGRG	1 cut(s)	465
BmgT120I	GGNCC	2 cut(s)	26, 1593
BmiI	GGNNCC	4 cut(s)	324, 1492, 1696, 2226
BmrFI	CCNGG	5 cut(s)	30, 383, 564, 1640, 1979
BmsI	GCATC	7 cut(s)	354, 698, 891, 1379, 1534, 1873, 1954
BpiI	GAAGAC	2 cut(s)	1295, 1329
BpmI	CTGGAG	1 cut(s)	1270
Bpu10I	CCTNAGC	1 cut(s)	1620
BpuEI	CTTGAG	1 cut(s)	193
BsaBI	GATNNNNATC	1 cut(s)	1395
BsaJI	CCNNGG	5 cut(s)	28, 93, 562, 1530, 2137
BsaWI	WCCGGW	2 cut(s)	511, 672
Bsc4I	CCNNNNNNNGG	8 cut(s)	34, 35, 679, 1004, 1487, 1513, 1645, 1830
Bse1I	ACTGG	6 cut(s)	1009, 1287, 1468, 1828, 1850, 2090
Bse21I	CCTNAGG	1 cut(s)	489
Bse3DI	GCAATG	1 cut(s)	1728
Bse8I	GATNNNNATC	1 cut(s)	1395
BseAI	TCCGGA	1 cut(s)	511
BseBI	CCWGG	5 cut(s)	30, 383, 564, 1640, 1979
BseDI	CCNNGG	5 cut(s)	28, 93, 562, 1530, 2137
BseGI	GGATG	6 cut(s)	713, 775, 1111, 1507, 1525, 1888
BseJI	GATNNNNATC	1 cut(s)	1395
BseLI	CCNNNNNNNGG	8 cut(s)	34, 35, 679, 1004, 1487, 1513, 1645, 1830
BseMI	GCAATG	1 cut(s)	1728
BseMII	CTCAG	4 cut(s)	503, 785, 1077, 1611
BseNI	ACTGG	6 cut(s)	1009, 1287, 1468, 1828, 1850, 2090
BseRI	GAGGAG	1 cut(s)	1661
BseSI	GKGCMC	3 cut(s)	41, 445, 2105
BseX3I	CGGCCG	1 cut(s)	116
BseXI	GCAGC	8 cut(s)	73, 76, 85, 88, 307, 510, 698, 2110
BsgI	GTGCAG	1 cut(s)	444
Bsh1236I	CGCG	1 cut(s)	95
Bsh1285I	CGRYCG	1 cut(s)	119
BshFI	GGCC	4 cut(s)	27, 118, 570, 1383
BshNI	GGYRCC	1 cut(s)	2224
BsiEI	CGRYCG	1 cut(s)	119
BsiHKAI	GWGCWC	4 cut(s)	445, 1521, 1738, 2105
BsiHKCI	CYCGRG	1 cut(s)	465
BsiSI	CCGG	3 cut(s)	512, 673, 1380
BslFI	GGGAC	1 cut(s)	1806
BslI	CCNNNNNNNGG	8 cut(s)	34, 35, 679, 1004, 1487, 1513, 1645, 1830
BsmAI	GTCTC	2 cut(s)	795, 1352
BsmBI	CGTCTC	2 cut(s)	795, 1352
BsmFI	GGGAC	1 cut(s)	1806
BsmI	GAATGC	1 cut(s)	831
BsnI	GGCC	4 cut(s)	27, 118, 570, 1383
BsoBI	CYCGRG	1 cut(s)	465
Bsp1286I	GDGCHC	5 cut(s)	41, 445, 1521, 1738, 2105
Bsp13I	TCCGGA	1 cut(s)	511
Bsp1407I	TGTACA	1 cut(s)	2203
Bsp143I	GATC	7 cut(s)	304, 541, 655, 1007, 1396, 1432, 1439
BspACI	CCGC	2 cut(s)	93, 95
BspANI	GGCC	4 cut(s)	27, 118, 570, 1383
BspCNI	CTCAG	4 cut(s)	502, 786, 1078, 1612
BspEI	TCCGGA	1 cut(s)	511
BspFNI	CGCG	1 cut(s)	95
BspLI	GGNNCC	4 cut(s)	324, 1492, 1696, 2226
BspMAI	CTGCAG	1 cut(s)	1449
BspMI	ACCTGC	1 cut(s)	1530
BspPI	GGATC	4 cut(s)	312, 549, 1015, 1447
BspT107I	GGYRCC	1 cut(s)	2224
BspTI	CTTAAG	1 cut(s)	2146
BsrDI	GCAATG	1 cut(s)	1728
BsrGI	TGTACA	1 cut(s)	2203
BsrI	ACTGG	6 cut(s)	1009, 1287, 1468, 1828, 1850, 2090
BssECI	CCNNGG	5 cut(s)	28, 93, 562, 1530, 2137
BssMI	GATC	7 cut(s)	304, 541, 655, 1007, 1396, 1432, 1439
BssT1I	CCWWGG	2 cut(s)	1530, 2137
Bst2UI	CCWGG	5 cut(s)	30, 383, 564, 1640, 1979
Bst4CI	ACNGT	4 cut(s)	374, 1558, 1740, 1935
Bst6I	CTCTTC	2 cut(s)	534, 1359
BstAFI	CTTAAG	1 cut(s)	2146
BstAPI	GCANNNNNTGC	2 cut(s)	86, 1727
BstAUI	TGTACA	1 cut(s)	2203
BstC8I	GCNNGC	2 cut(s)	1209, 1684
BstDEI	CTNAG	4 cut(s)	489, 794, 1086, 1620
BstDSI	CCRYGG	1 cut(s)	93
BstEII	GGTNACC	1 cut(s)	449
BstENI	CCTNNNNNAGG	2 cut(s)	1485, 1643
BstF5I	GGATG	6 cut(s)	713, 775, 1111, 1507, 1525, 1888
BstFNI	CGCG	1 cut(s)	95
BstHHI	GCGC	2 cut(s)	1627, 1634
BstKTI	GATC	7 cut(s)	307, 544, 658, 1010, 1399, 1435, 1442
BstMAI	GTCTC	2 cut(s)	795, 1352
BstMBI	GATC	7 cut(s)	304, 541, 655, 1007, 1396, 1432, 1439
BstMCI	CGRYCG	1 cut(s)	119
BstNI	CCWGG	5 cut(s)	30, 383, 564, 1640, 1979
BstNSI	RCATGY	1 cut(s)	1686
BstPI	GGTNACC	1 cut(s)	449
BstSCI	CCNGG	5 cut(s)	28, 381, 562, 1638, 1977
BstSFI	CTRYAG	2 cut(s)	1445, 1597
BstSLI	GKGCMC	3 cut(s)	41, 445, 2105
BstUI	CGCG	1 cut(s)	95
BstV1I	GCAGC	8 cut(s)	73, 76, 85, 88, 307, 510, 698, 2110
BstV2I	GAAGAC	2 cut(s)	1295, 1329
BstX2I	RGATCY	1 cut(s)	541
BstYI	RGATCY	1 cut(s)	541
BstZI	CGGCCG	1 cut(s)	116
Bsu36I	CCTNAGG	1 cut(s)	489
BsuRI	GGCC	4 cut(s)	27, 118, 570, 1383
BtgI	CCRYGG	1 cut(s)	93
BtsCI	GGATG	6 cut(s)	713, 775, 1111, 1507, 1525, 1888
BtsI	GCAGTG	1 cut(s)	1442
BtsIMutI	CAGTG	7 cut(s)	1002, 1294, 1442, 1736, 1800, 1835, 2097
BveI	ACCTGC	1 cut(s)	1530
Cac8I	GCNNGC	2 cut(s)	1209, 1684
CaiI	CAGNNNCTG	2 cut(s)	86, 1004
CfoI	GCGC	2 cut(s)	1627, 1634
Cfr13I	GGNCC	2 cut(s)	26, 1593
Cfr42I	CCGCGG	1 cut(s)	96
CseI	GACGC	1 cut(s)	260
CsiI	ACCWGGT	1 cut(s)	1977
Csp6I	GTAC	5 cut(s)	1462, 1602, 1897, 1931, 2204
CspCI	CAANNNNNGTGG	2 cut(s)	2040, 2075
CviQI	GTAC	5 cut(s)	1462, 1602, 1897, 1931, 2204
DdeI	CTNAG	4 cut(s)	489, 794, 1086, 1620
DpnI	GATC	7 cut(s)	306, 543, 657, 1009, 1398, 1434, 1441
DpnII	GATC	7 cut(s)	304, 541, 655, 1007, 1396, 1432, 1439
DraI	TTTAAA	2 cut(s)	318, 646
EaeI	YGGCCR	2 cut(s)	116, 1381
EagI	CGGCCG	1 cut(s)	116
Eam1104I	CTCTTC	2 cut(s)	534, 1359
EarI	CTCTTC	2 cut(s)	534, 1359
EclXI	CGGCCG	1 cut(s)	116
Eco130I	CCWWGG	2 cut(s)	1530, 2137
Eco147I	AGGCCT	1 cut(s)	570
Eco32I	GATATC	1 cut(s)	379
Eco47I	GGWCC	1 cut(s)	1593
Eco52I	CGGCCG	1 cut(s)	116
Eco57I	CTGAAG	4 cut(s)	240, 438, 1289, 1776
Eco81I	CCTNAGG	1 cut(s)	489
Eco88I	CYCGRG	1 cut(s)	465
Eco91I	GGTNACC	1 cut(s)	449
EcoNI	CCTNNNNNAGG	2 cut(s)	1485, 1643
EcoO109I	RGGNCCY	1 cut(s)	1593
EcoO65I	GGTNACC	1 cut(s)	449
EcoRII	CCWGG	5 cut(s)	28, 381, 562, 1638, 1977
EcoRV	GATATC	1 cut(s)	379
EcoT14I	CCWWGG	2 cut(s)	1530, 2137
EcoT22I	ATGCAT	1 cut(s)	1688
ErhI	CCWWGG	2 cut(s)	1530, 2137
Esp3I	CGTCTC	2 cut(s)	795, 1352
FaqI	GGGAC	1 cut(s)	1806
FauNDI	CATATG	1 cut(s)	1688
FokI	GGATG	6 cut(s)	720, 762, 1098, 1494, 1512, 1895
FspBI	CTAG	5 cut(s)	261, 572, 1317, 2079, 2138
GlaI	GCGC	2 cut(s)	1626, 1633
GsuI	CTGGAG	1 cut(s)	1270
HaeIII	GGCC	4 cut(s)	27, 118, 570, 1383
HapII	CCGG	3 cut(s)	512, 673, 1380
HgaI	GACGC	1 cut(s)	260
HhaI	GCGC	2 cut(s)	1627, 1634
Hin6I	GCGC	2 cut(s)	1625, 1632
HinP1I	GCGC	2 cut(s)	1625, 1632
HindIII	AAGCTT	1 cut(s)	2054
HpaII	CCGG	3 cut(s)	512, 673, 1380
HphI	GGTGA	5 cut(s)	356, 1074, 1921, 1980, 1993
Hpy166II	GTNNAC	5 cut(s)	161, 443, 505, 2103, 2186
Hpy188I	TCNGA	7 cut(s)	418, 769, 795, 819, 1062, 1276, 1396
Hpy8I	GTNNAC	5 cut(s)	161, 443, 505, 2103, 2186
HpyAV	CCTTC	4 cut(s)	8, 413, 609, 789
HpyCH4III	ACNGT	4 cut(s)	374, 1558, 1740, 1935
HpyCH4IV	ACGT	2 cut(s)	285, 1702
HpyF3I	CTNAG	4 cut(s)	489, 794, 1086, 1620
HpySE526I	ACGT	2 cut(s)	285, 1702
HspAI	GCGC	2 cut(s)	1625, 1632
Kpn2I	TCCGGA	1 cut(s)	511
KspI	CCGCGG	1 cut(s)	96
Kzo9I	GATC	7 cut(s)	304, 541, 655, 1007, 1396, 1432, 1439
LmnI	GCTCC	6 cut(s)	322, 637, 1496, 1516, 1700, 1733
Lsp1109I	GCAGC	8 cut(s)	73, 76, 85, 88, 307, 510, 698, 2110
LweI	GCATC	7 cut(s)	354, 698, 891, 1379, 1534, 1873, 1954
MabI	ACCWGGT	1 cut(s)	1977
MaeI	CTAG	5 cut(s)	261, 572, 1317, 2079, 2138
MaeII	ACGT	2 cut(s)	285, 1702
MaeIII	GTNAC	7 cut(s)	449, 675, 858, 1253, 1470, 1862, 1986
MalI	GATC	7 cut(s)	306, 543, 657, 1009, 1398, 1434, 1441
MboI	GATC	7 cut(s)	304, 541, 655, 1007, 1396, 1432, 1439
MflI	RGATCY	1 cut(s)	541
MhlI	GDGCHC	5 cut(s)	41, 445, 1521, 1738, 2105
MlyI	GAGTC	3 cut(s)	686, 805, 2151
MmeI	TCCRAC	2 cut(s)	882, 1722
Mph1103I	ATGCAT	1 cut(s)	1688
MroI	TCCGGA	1 cut(s)	511
MroXI	GAANNNNTTC	3 cut(s)	598, 624, 993
MseI	TTAA	7 cut(s)	186, 317, 645, 809, 911, 2036, 2147
MslI	CAYNNNNRTG	3 cut(s)	867, 1569, 1687
MspA1I	CMGCKG	2 cut(s)	95, 523
MspCI	CTTAAG	1 cut(s)	2146
MspI	CCGG	3 cut(s)	512, 673, 1380
MspR9I	CCNGG	5 cut(s)	30, 383, 564, 1640, 1979
Mva1269I	GAATGC	1 cut(s)	831
MvaI	CCWGG	5 cut(s)	30, 383, 564, 1640, 1979
MvnI	CGCG	1 cut(s)	95
NdeI	CATATG	1 cut(s)	1688
NdeII	GATC	7 cut(s)	304, 541, 655, 1007, 1396, 1432, 1439
NlaIV	GGNNCC	4 cut(s)	324, 1492, 1696, 2226
NmuCI	GTSAC	2 cut(s)	1862, 1986
NsiI	ATGCAT	1 cut(s)	1688
NspI	RCATGY	1 cut(s)	1686
PaeI	GCATGC	1 cut(s)	1686
PaeR7I	CTCGAG	1 cut(s)	465
PaqCI	CACCTGC	1 cut(s)	1530
PceI	AGGCCT	1 cut(s)	570
PcsI	WCGNNNNNNNCGW	1 cut(s)	345
PctI	GAATGC	1 cut(s)	831
PdmI	GAANNNNTTC	3 cut(s)	598, 624, 993
PfeI	GAWTC	9 cut(s)	457, 844, 941, 1079, 1277, 1391, 1503, 1954, 2162
PflMI	CCANNNNNTGG	2 cut(s)	1004, 1513
PleI	GAGTC	3 cut(s)	686, 804, 2150
PpsI	GAGTC	3 cut(s)	686, 804, 2150
PpuMI	RGGWCCY	1 cut(s)	1593
Psp1406I	AACGTT	1 cut(s)	285
Psp5II	RGGWCCY	1 cut(s)	1593
Psp6I	CCWGG	5 cut(s)	28, 381, 562, 1638, 1977
PspEI	GGTNACC	1 cut(s)	449
PspGI	CCWGG	5 cut(s)	28, 381, 562, 1638, 1977
PspN4I	GGNNCC	4 cut(s)	324, 1492, 1696, 2226
PspPI	GGNCC	2 cut(s)	26, 1593
PspPPI	RGGWCCY	1 cut(s)	1593
PstI	CTGCAG	1 cut(s)	1449
PstNI	CAGNNNCTG	2 cut(s)	86, 1004
PsuI	RGATCY	1 cut(s)	541
PvuII	CAGCTG	1 cut(s)	523
RsaI	GTAC	5 cut(s)	1463, 1603, 1898, 1932, 2205
RsaNI	GTAC	5 cut(s)	1462, 1602, 1897, 1931, 2204
RseI	CAYNNNNRTG	3 cut(s)	867, 1569, 1687
SacII	CCGCGG	1 cut(s)	96
SaqAI	TTAA	7 cut(s)	186, 317, 645, 809, 911, 2036, 2147
Sau3AI	GATC	7 cut(s)	304, 541, 655, 1007, 1396, 1432, 1439
Sau96I	GGNCC	2 cut(s)	26, 1593
ScaI	AGTACT	1 cut(s)	1463
SchI	GAGTC	3 cut(s)	686, 805, 2151
ScrFI	CCNGG	5 cut(s)	30, 383, 564, 1640, 1979
SduI	GDGCHC	5 cut(s)	41, 445, 1521, 1738, 2105
SexAI	ACCWGGT	1 cut(s)	1977
SfaNI	GCATC	7 cut(s)	354, 698, 891, 1379, 1534, 1873, 1954
SfcI	CTRYAG	2 cut(s)	1445, 1597
Sfr274I	CTCGAG	1 cut(s)	465
Sfr303I	CCGCGG	1 cut(s)	96
SgrBI	CCGCGG	1 cut(s)	96
SinI	GGWCC	1 cut(s)	1593
SlaI	CTCGAG	1 cut(s)	465
SmiMI	CAYNNNNRTG	3 cut(s)	867, 1569, 1687
SmlI	CTYRAG	3 cut(s)	208, 465, 2146
SmoI	CTYRAG	3 cut(s)	208, 465, 2146
SphI	GCATGC	1 cut(s)	1686
SseBI	AGGCCT	1 cut(s)	570
SsiI	CCGC	2 cut(s)	93, 95
SspI	AATATT	3 cut(s)	401, 481, 1538
SspMI	CTAG	5 cut(s)	261, 572, 1317, 2079, 2138
StuI	AGGCCT	1 cut(s)	570
StyD4I	CCNGG	5 cut(s)	28, 381, 562, 1638, 1977
StyI	CCWWGG	2 cut(s)	1530, 2137
TaaI	ACNGT	4 cut(s)	374, 1558, 1740, 1935
TaiI	ACGT	2 cut(s)	288, 1705
TaqI	TCGA	5 cut(s)	339, 466, 839, 1347, 2210
TatI	WGTACW	4 cut(s)	1461, 1601, 1930, 2203
TauI	GCSGC	2 cut(s)	95, 98
TfiI	GAWTC	9 cut(s)	457, 844, 941, 1079, 1277, 1391, 1503, 1954, 2162
Tru1I	TTAA	7 cut(s)	186, 317, 645, 809, 911, 2036, 2147
Tru9I	TTAA	7 cut(s)	186, 317, 645, 809, 911, 2036, 2147
TscAI	CASTG	7 cut(s)	1009, 1294, 1449, 1743, 1800, 1835, 2097
TseFI	GTSAC	2 cut(s)	1862, 1986
TseI	GCWGC	8 cut(s)	86, 89, 98, 101, 295, 523, 711, 2123
Tsp45I	GTSAC	2 cut(s)	1862, 1986
TspGWI	ACGGA	4 cut(s)	77, 1376, 1884, 2171
TspRI	CASTG	7 cut(s)	1009, 1294, 1449, 1743, 1800, 1835, 2097
Van91I	CCANNNNNTGG	2 cut(s)	1004, 1513
Vha464I	CTTAAG	1 cut(s)	2146
VneI	GTGCAC	2 cut(s)	441, 2101
VpaK11BI	GGWCC	1 cut(s)	1593
XagI	CCTNNNNNAGG	2 cut(s)	1485, 1643
XapI	RAATTY	5 cut(s)	970, 993, 1052, 1330, 1613
XceI	RCATGY	1 cut(s)	1686
XhoI	CTCGAG	1 cut(s)	465
XmaJI	CCTAGG	1 cut(s)	2137
XmnI	GAANNNNTTC	3 cut(s)	598, 624, 993
XspI	CTAG	5 cut(s)	261, 572, 1317, 2079, 2138
ZrmI	AGTACT	1 cut(s)	1463
Zsp2I	ATGCAT	1 cut(s)	1688

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.