RLG00000017468

Serine/Threonine protein kinases, catalytic domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
17196450 .. 17202562
6113 bp
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UTR
Exon/CDS
Intron
RLM00000017468

Sequence Viewer

Length: 1476 bp
ATGAGGAGAAATGGATCCGAATATGGAGACGCAGGAGAAAGCTCTGATCTTACGTTGTGTAGTCTCCGTCGAGTTTATTCGCCGCAGGAGAAAAGCTCAGCATCCTATGACACTAACTGGGAAGAAAGCTCCAAGCTCCATCGGCGGCCTGGGCATGGAGTCTCTGACACTCAACCTCAAACCTGGAAATTGTTACCCAAAAAAACCAAAAAAGGATTAAAAATGGGAACTTTCTCAAAAAGTCCCAAACTTCAAGTTCTGTTCATCATAGCTTGCCTATTCTCTCCCTGTATCAGCCTCAAGATTGGAGAGACGTGTTCCAAAGACACAGATTGCGACGCCGGTTTAAGCTGCCAAACATGCGCTGCAAATGGTAATACCCGACCCAGATGTACCCGGATTCAACCCACCAATCCTACATCTAAGGTGAAAGGTCTTCCCTTCAATAATTACACATGGCTTACGACCCACAACTCGTACGCTCAAGCAGGGGTGAGGTCGTCCATCGGATCGTTGATTATTGCTCCGATGAATCAGAACGACACCGTTACATCTCAGCTCAAAAATGGAGTTCGAGGATTTATGTTGGATATGTATGACTTCAACAACGACATCTGGTTATGTCACTCAACTGGGGGCAAATGTTACAATTTCACAGCATTTAGACCTGCTCTTGACGTGCTGAAAGAAATTCGAGCATTTTTGGAAGCAAATCCCTCAGAGATTGTCACTATTTTTATTGAGGATTATGTAACATCTCCATCAGGCTTGTCAAAAGTCTTTGATTCAGCTGGCTTAAAGACCTATATGTTCCCCCTGGCTCGGATGCCAAAGGATGGAAACGATTGGCCAACTGTTGATGATATGGCTAAGAACAATCAGAGGTTGGTGGTCTTCACCTCTAAGTCATCTAAGGAGGCCTCAGAGGGAATTGCTTACGAGTGGAACTATGTCGTAGAAAATCAATATGGAAATGGTGGGATGGTACCTAATTCATGTCCGAATCGTGCTGAATCATCTCCCATGAACACAACATCGAAGTCACTAGTTCTGGTGAACTACTTCCGTGATATTCCCAATGCATCAGCAACTTGCGCAGACAATTCAGCTCCATTACTGAGCGAGATAAAAACTTGTTATGATGCAGCTGGGAAACGGTGGCCAAACTTTATTGCTGTTGATTATTACCAGAAAAGTGATGGTGGGGGAGCTGCTGAAGCAGTGGATCAATCAAATGGTCAACTGACATGTGGGTGTGACAGCATTACATATTGCAAGGTGAATGCTACAACTGGAAATGCCACATTTGGTTCATGTGATGTCCCAAAACTTGCTCCACCGCCGCCTGCTTCCCTCGGCAGCACACCTCCTCCTTCAGGTCCTAGTAGTAACTTTGCTCCTCAGAATAGCAAATCAATCCTGTTGAGGTGGTTGTGTGGAACAATTTTGGCTGCCACTCTCTCAATGCGGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

492

Amino Acids

53.43

Weight (kDa)

8.52

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI-PLC_cat PF26178 135 - 426 3e-161 PI-PLC-like catalytic domain
PI-PLC_X PF26146 175 - 402 2.2e-25 PI-PLC X
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1096
Acc36I ACCTGC 1 cut(s) 676
Acc65I GGTACC 1 cut(s) 985
AccB1I GGYRCC 1 cut(s) 985
AccB7I CCANNNNNTGG 1 cut(s) 836
AciI CCGC 5 cut(s) 83, 145, 1340, 1343, 1468
AclWI GGATC 4 cut(s) 9, 22, 517, 1233
AcoI YGGCCR 2 cut(s) 848, 1160
AcsI RAATTY 1 cut(s) 690
AcuI CTGAAG 2 cut(s) 1236, 1359
AcyI GRCGYC 1 cut(s) 339
AfaI GTAC 3 cut(s) 394, 479, 987
AfiI CCNNNNNNNGG 4 cut(s) 155, 822, 836, 1376
AflIII ACRYGT 2 cut(s) 314, 1247
AgsI TTSAA 4 cut(s) 254, 404, 445, 604
AhlI ACTAGT 1 cut(s) 1045
AjiI CACGTC 2 cut(s) 315, 679
AjnI CCWGG 3 cut(s) 148, 182, 816
Alw26I GTCTC 4 cut(s) 21, 68, 166, 305
AlwI GGATC 4 cut(s) 9, 22, 517, 1233
AoxI GGCC 4 cut(s) 146, 848, 918, 1160
ApeKI GCWGC 6 cut(s) 351, 365, 1145, 1211, 1359, 1451
ApoI RAATTY 1 cut(s) 690
Asp700I GAANNNNTTC 1 cut(s) 1061
Asp718I GGTACC 1 cut(s) 985
AspLEI GCGC 2 cut(s) 365, 1097
AspS9I GGNCC 1 cut(s) 1379
AsuC2I CCSGG 1 cut(s) 397
AsuHPI GGTGA 5 cut(s) 439, 505, 889, 1066, 1291
AvaII GGWCC 1 cut(s) 1379
BalI TGGCCA 2 cut(s) 850, 1162
BamHI GGATCC 1 cut(s) 14
BanI GGYRCC 1 cut(s) 985
BbsI GAAGAC 2 cut(s) 428, 886
BbvI GCAGC 6 cut(s) 338, 352, 1157, 1198, 1371, 1438
BccI CCATC 6 cut(s) 147, 512, 769, 830, 976, 1193
BciT130I CCWGG 3 cut(s) 150, 184, 818
BcnI CCSGG 1 cut(s) 397
BcoDI GTCTC 4 cut(s) 21, 68, 166, 305
BcuI ACTAGT 1 cut(s) 1045
BfaI CTAG 2 cut(s) 1046, 1383
BfuAI ACCTGC 1 cut(s) 676
BisI GCNGC 9 cut(s) 83, 146, 352, 366, 1146, 1212, 1343, 1360, 1452
BlpI GCTNAGC 1 cut(s) 97
BlsI GCNGC 9 cut(s) 84, 147, 353, 367, 1147, 1213, 1344, 1361, 1453
Bme1390I CCNGG 4 cut(s) 150, 184, 397, 818
Bme18I GGWCC 1 cut(s) 1379
BmgBI CACGTC 2 cut(s) 315, 679
BmgT120I GGNCC 1 cut(s) 1379
BmiI GGNNCC 2 cut(s) 16, 987
BmrFI CCNGG 4 cut(s) 150, 184, 397, 818
BmrI ACTGGG 2 cut(s) 127, 642
BmsI GCATC 4 cut(s) 110, 816, 1091, 1132
BmuI ACTGGG 2 cut(s) 127, 642
BpiI GAAGAC 2 cut(s) 428, 886
BplI GAGNNNNNCTC 2 cut(s) 80, 112
Bpu1102I GCTNAGC 1 cut(s) 97
BpuEI CTTGAG 2 cut(s) 284, 468
BpuMI CCSGG 1 cut(s) 397
BsaHI GRCGYC 1 cut(s) 339
BsaJI CCNNGG 3 cut(s) 149, 816, 1354
BsaXI ACNNNNNCTCC 2 cut(s) 1354, 1384
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 822, 836, 1376
Bse118I RCCGGY 1 cut(s) 341
Bse1I ACTGG 3 cut(s) 122, 637, 1297
BseBI CCWGG 3 cut(s) 150, 184, 818
BseDI CCNNGG 3 cut(s) 149, 816, 1354
BseGI GGATG 4 cut(s) 101, 831, 841, 987
BseLI CCNNNNNNNGG 4 cut(s) 155, 822, 836, 1376
BseMII CTCAG 6 cut(s) 111, 569, 732, 936, 1109, 1415
BseNI ACTGG 3 cut(s) 122, 637, 1297
BseRI GAGGAG 3 cut(s) 19, 1359, 1389
BseXI GCAGC 6 cut(s) 338, 352, 1157, 1198, 1371, 1438
BseYI CCCAGC 1 cut(s) 1148
BshFI GGCC 4 cut(s) 148, 850, 920, 1162
BshNI GGYRCC 1 cut(s) 985
BsiSI CCGG 2 cut(s) 342, 397
BsiWI CGTACG 1 cut(s) 477
BslFI GGGAC 2 cut(s) 228, 1307
BslI CCNNNNNNNGG 4 cut(s) 155, 822, 836, 1376
BsmAI GTCTC 4 cut(s) 21, 68, 166, 305
BsmBI CGTCTC 2 cut(s) 21, 305
BsmFI GGGAC 2 cut(s) 228, 1307
BsmI GAATGC 1 cut(s) 1288
BsnI GGCC 4 cut(s) 148, 850, 920, 1162
Bsp143I GATC 4 cut(s) 14, 46, 509, 1225
Bsp1720I GCTNAGC 1 cut(s) 97
BspACI CCGC 5 cut(s) 83, 145, 1340, 1343, 1468
BspANI GGCC 4 cut(s) 148, 850, 920, 1162
BspCNI CTCAG 6 cut(s) 110, 568, 731, 935, 1110, 1414
BspLI GGNNCC 2 cut(s) 16, 987
BspMI ACCTGC 1 cut(s) 676
BspPI GGATC 4 cut(s) 9, 22, 517, 1233
BspT107I GGYRCC 1 cut(s) 985
BsrFI RCCGGY 1 cut(s) 341
BsrI ACTGG 3 cut(s) 122, 637, 1297
BssAI RCCGGY 1 cut(s) 341
BssECI CCNNGG 3 cut(s) 149, 816, 1354
BssMI GATC 4 cut(s) 14, 46, 509, 1225
BssNI GRCGYC 1 cut(s) 339
Bst2UI CCWGG 3 cut(s) 150, 184, 818
Bst4CI ACNGT 3 cut(s) 547, 856, 1158
BstACI GRCGYC 1 cut(s) 339
BstC8I GCNNGC 3 cut(s) 274, 793, 1347
BstENI CCTNNNNNAGG 1 cut(s) 1374
BstF5I GGATG 4 cut(s) 101, 831, 841, 987
BstHHI GCGC 2 cut(s) 365, 1097
BstKTI GATC 4 cut(s) 17, 49, 512, 1228
BstMAI GTCTC 4 cut(s) 21, 68, 166, 305
BstMBI GATC 4 cut(s) 14, 46, 509, 1225
BstMWI GCNNNNNNNGC 5 cut(s) 142, 151, 360, 1094, 1217
BstNI CCWGG 3 cut(s) 150, 184, 818
BstNSI RCATGY 2 cut(s) 363, 1251
BstSCI CCNGG 4 cut(s) 148, 182, 395, 816
BstV1I GCAGC 6 cut(s) 338, 352, 1157, 1198, 1371, 1438
BstV2I GAAGAC 2 cut(s) 428, 886
BstX2I RGATCY 1 cut(s) 14
BstYI RGATCY 1 cut(s) 14
BsuRI GGCC 4 cut(s) 148, 850, 920, 1162
BtrI CACGTC 2 cut(s) 315, 679
BtsCI GGATG 4 cut(s) 101, 831, 841, 987
BtsI GCAGTG 1 cut(s) 1227
BtsIMutI CAGTG 1 cut(s) 1227
BveI ACCTGC 1 cut(s) 676
Cac8I GCNNGC 3 cut(s) 274, 793, 1347
CfoI GCGC 2 cut(s) 365, 1097
Cfr10I RCCGGY 1 cut(s) 341
Cfr13I GGNCC 1 cut(s) 1379
CseI GACGC 2 cut(s) 38, 347
Csp6I GTAC 3 cut(s) 393, 478, 986
CviAII CATG 7 cut(s) 155, 360, 456, 996, 1024, 1248, 1314
CviQI GTAC 3 cut(s) 393, 478, 986
DpnI GATC 4 cut(s) 16, 48, 511, 1227
DpnII GATC 4 cut(s) 14, 46, 509, 1225
EaeI YGGCCR 2 cut(s) 848, 1160
Eco147I AGGCCT 1 cut(s) 920
Eco47I GGWCC 1 cut(s) 1379
Eco57I CTGAAG 2 cut(s) 1236, 1359
EcoNI CCTNNNNNAGG 1 cut(s) 1374
EcoO109I RGGNCCY 1 cut(s) 1379
EcoRII CCWGG 3 cut(s) 148, 182, 816
EcoT22I ATGCAT 1 cut(s) 1084
Esp3I CGTCTC 2 cut(s) 21, 305
FaeI CATG 7 cut(s) 158, 363, 459, 999, 1027, 1251, 1317
FaqI GGGAC 2 cut(s) 228, 1307
FatI CATG 7 cut(s) 154, 359, 455, 995, 1023, 1247, 1313
Fnu4HI GCNGC 9 cut(s) 83, 146, 352, 366, 1146, 1212, 1343, 1360, 1452
FokI GGATG 4 cut(s) 88, 838, 848, 994
Fsp4HI GCNGC 9 cut(s) 83, 146, 352, 366, 1146, 1212, 1343, 1360, 1452
FspBI CTAG 2 cut(s) 1046, 1383
FspI TGCGCA 1 cut(s) 1096
GlaI GCGC 2 cut(s) 364, 1096
GluI GCNGC 9 cut(s) 83, 146, 352, 366, 1146, 1212, 1343, 1360, 1452
GsaI CCCAGC 1 cut(s) 1152
HaeIII GGCC 4 cut(s) 148, 850, 920, 1162
HapII CCGG 2 cut(s) 342, 397
HgaI GACGC 2 cut(s) 38, 347
HhaI GCGC 2 cut(s) 365, 1097
Hin1I GRCGYC 1 cut(s) 339
Hin1II CATG 7 cut(s) 158, 363, 459, 999, 1027, 1251, 1317
Hin6I GCGC 2 cut(s) 363, 1095
HinP1I GCGC 2 cut(s) 363, 1095
HincII GTYRAC 1 cut(s) 1241
HindII GTYRAC 1 cut(s) 1241
HinfI GANTC 6 cut(s) 159, 400, 532, 785, 1003, 1013
HpaII CCGG 2 cut(s) 342, 397
HphI GGTGA 5 cut(s) 439, 505, 889, 1066, 1291
Hpy166II GTNNAC 2 cut(s) 1057, 1241
Hpy188III TCNNGA 2 cut(s) 301, 674
Hpy8I GTNNAC 2 cut(s) 1057, 1241
Hpy99I CGWCG 2 cut(s) 72, 341
HpyAV CCTTC 2 cut(s) 451, 1383
HpyCH4III ACNGT 3 cut(s) 547, 856, 1158
HpyCH4IV ACGT 3 cut(s) 53, 314, 678
HpyCH4V TGCA 4 cut(s) 368, 1082, 1145, 1275
HpyF10VI GCNNNNNNNGC 5 cut(s) 142, 151, 360, 1094, 1217
HpySE526I ACGT 3 cut(s) 53, 314, 678
Hsp92I GRCGYC 1 cut(s) 339
Hsp92II CATG 7 cut(s) 158, 363, 459, 999, 1027, 1251, 1317
HspAI GCGC 2 cut(s) 363, 1095
KpnI GGTACC 1 cut(s) 989
Kzo9I GATC 4 cut(s) 14, 46, 509, 1225
LmnI GCTCC 7 cut(s) 134, 141, 529, 1114, 1208, 1339, 1402
Lsp1109I GCAGC 6 cut(s) 338, 352, 1157, 1198, 1371, 1438
LweI GCATC 4 cut(s) 110, 816, 1091, 1132
MaeI CTAG 2 cut(s) 1046, 1383
MaeII ACGT 3 cut(s) 53, 314, 678
MaeIII GTNAC 9 cut(s) 192, 547, 623, 644, 727, 751, 1041, 1256, 1388
MalI GATC 4 cut(s) 16, 48, 511, 1227
MboI GATC 4 cut(s) 14, 46, 509, 1225
MboII GAAGA 3 cut(s) 134, 428, 886
MflI RGATCY 1 cut(s) 14
MlsI TGGCCA 2 cut(s) 850, 1162
MluCI AATT 8 cut(s) 188, 448, 649, 690, 930, 991, 1102, 1443
MluNI TGGCCA 2 cut(s) 850, 1162
MlyI GAGTC 1 cut(s) 168
MmeI TCCRAC 1 cut(s) 567
Mox20I TGGCCA 2 cut(s) 850, 1162
Mph1103I ATGCAT 1 cut(s) 1084
MroXI GAANNNNTTC 1 cut(s) 1061
MscI TGGCCA 2 cut(s) 850, 1162
MseI TTAA 3 cut(s) 218, 347, 797
MslI CAYNNNNRTG 1 cut(s) 1252
Msp20I TGGCCA 2 cut(s) 850, 1162
MspA1I CMGCKG 2 cut(s) 791, 1148
MspI CCGG 2 cut(s) 342, 397
MspR9I CCNGG 4 cut(s) 150, 184, 397, 818
Mva1269I GAATGC 1 cut(s) 1288
MvaI CCWGG 3 cut(s) 150, 184, 818
MwoI GCNNNNNNNGC 5 cut(s) 142, 151, 360, 1094, 1217
NciI CCSGG 1 cut(s) 397
NdeII GATC 4 cut(s) 14, 46, 509, 1225
NlaIII CATG 7 cut(s) 158, 363, 459, 999, 1027, 1251, 1317
NlaIV GGNNCC 2 cut(s) 16, 987
NmeAIII GCCGAG 1 cut(s) 1335
NmuCI GTSAC 4 cut(s) 623, 727, 1041, 1256
NsbI TGCGCA 1 cut(s) 1096
NsiI ATGCAT 1 cut(s) 1084
NspI RCATGY 2 cut(s) 363, 1251
PceI AGGCCT 1 cut(s) 920
PciI ACATGT 1 cut(s) 1247
PctI GAATGC 1 cut(s) 1288
PdmI GAANNNNTTC 1 cut(s) 1061
PfeI GAWTC 5 cut(s) 400, 532, 785, 1003, 1013
Pfl23II CGTACG 1 cut(s) 477
PflMI CCANNNNNTGG 1 cut(s) 836
PkrI GCNGC 9 cut(s) 84, 147, 353, 367, 1147, 1213, 1344, 1361, 1453
PleI GAGTC 1 cut(s) 167
PpsI GAGTC 1 cut(s) 167
PpuMI RGGWCCY 1 cut(s) 1379
PscI ACATGT 1 cut(s) 1247
Psp5II RGGWCCY 1 cut(s) 1379
Psp6I CCWGG 3 cut(s) 148, 182, 816
PspFI CCCAGC 1 cut(s) 1148
PspGI CCWGG 3 cut(s) 148, 182, 816
PspLI CGTACG 1 cut(s) 477
PspN4I GGNNCC 2 cut(s) 16, 987
PspPI GGNCC 1 cut(s) 1379
PspPPI RGGWCCY 1 cut(s) 1379
PsuI RGATCY 1 cut(s) 14
PvuII CAGCTG 2 cut(s) 791, 1148
RsaI GTAC 3 cut(s) 394, 479, 987
RsaNI GTAC 3 cut(s) 393, 478, 986
RseI CAYNNNNRTG 1 cut(s) 1252
SaqAI TTAA 3 cut(s) 218, 347, 797
SatI GCNGC 9 cut(s) 83, 146, 352, 366, 1146, 1212, 1343, 1360, 1452
Sau3AI GATC 4 cut(s) 14, 46, 509, 1225
Sau96I GGNCC 1 cut(s) 1379
SchI GAGTC 1 cut(s) 168
ScrFI CCNGG 4 cut(s) 150, 184, 397, 818
SfaNI GCATC 4 cut(s) 110, 816, 1091, 1132
SinI GGWCC 1 cut(s) 1379
SmiMI CAYNNNNRTG 1 cut(s) 1252
SmlI CTYRAG 2 cut(s) 299, 483
SmoI CTYRAG 2 cut(s) 299, 483
SpeI ACTAGT 1 cut(s) 1045
Sse9I AATT 8 cut(s) 188, 448, 649, 690, 930, 991, 1102, 1443
SseBI AGGCCT 1 cut(s) 920
SsiI CCGC 5 cut(s) 83, 145, 1340, 1343, 1468
SspMI CTAG 2 cut(s) 1046, 1383
StuI AGGCCT 1 cut(s) 920
StyD4I CCNGG 4 cut(s) 148, 182, 395, 816
TaaI ACNGT 3 cut(s) 547, 856, 1158
TaiI ACGT 3 cut(s) 56, 317, 681
TaqI TCGA 4 cut(s) 70, 574, 694, 1037
TasI AATT 8 cut(s) 188, 448, 649, 690, 930, 991, 1102, 1443
TauI GCSGC 3 cut(s) 85, 148, 1345
TfiI GAWTC 5 cut(s) 400, 532, 785, 1003, 1013
Tru1I TTAA 3 cut(s) 218, 347, 797
Tru9I TTAA 3 cut(s) 218, 347, 797
TscAI CASTG 1 cut(s) 1227
TseFI GTSAC 4 cut(s) 623, 727, 1041, 1256
TseI GCWGC 6 cut(s) 351, 365, 1145, 1211, 1359, 1451
Tsp45I GTSAC 4 cut(s) 623, 727, 1041, 1256
TspDTI ATGAA 5 cut(s) 253, 545, 984, 1040, 1302
TspGWI ACGGA 2 cut(s) 56, 1055
TspRI CASTG 1 cut(s) 1227
Van91I CCANNNNNTGG 1 cut(s) 836
VpaK11BI GGWCC 1 cut(s) 1379
XagI CCTNNNNNAGG 1 cut(s) 1374
XapI RAATTY 1 cut(s) 690
XceI RCATGY 2 cut(s) 363, 1251
XcmI CCANNNNNNNNNTGG 2 cut(s) 146, 1196
XmnI GAANNNNTTC 1 cut(s) 1061
XspI CTAG 2 cut(s) 1046, 1383
Zsp2I ATGCAT 1 cut(s) 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.