Rorug02G0131800

Serine/Threonine protein kinases, catalytic domain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
11378563 .. 11397397
18835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0131800.1

Sequence Viewer

Length: 1290 bp
ATGGAATCAAATGGAGACTCTGAGCACCACATGATGATTGATGGAAGTGCTTTACCGACTTTGCAAATTGACCCTAAAAGAGCCCGGTTTCCATGCTGCATTGTGTGGACACCGCTTCCTGTTATTTCATGGTTGATTCCTTTTGTTGGCCACATTGGCATCTGCAGAGAAGATGGTGTGATTTTGGACTTTGCAGGACCCAATTTTGTGTCCGTGGATGACTTTGCTTTTGGAGCACCAACTCGCTACATCCAAATAAGCAAAGAAAAGTGTTGTGCTATACCCTGTCCATCTGAGCATGAAGCAGTGTTGCATGATGATCCTGGAAGAGACATTTTGACATGGGATGATGCACTTCAGAAGGGCACACAGGAATTCCAACACCGGTCTTATAACCTTTTTACCTGCAATTGCCACTCTTTTGTAGCCAACAGCCTTAACAGGTTAAGCTTTCGTTCTGGTGGGTGGAATGTGGTGAACCTCGCAGCTCTCATCTTCCTTAAGGGTGAATGGCCAGTTCTGGATATTTGTAAAAGCCAAGTACTGAACTTCCGAGTTGTGTTTCCTCTAAAGAAGGTATTTGATCTTAGAGCTGAAGGCGGAGCGCTACGAGGAGATGGGTCCACCACGGCGTCGGAGCTCACCGTCGAGGAGCGCATCGAGCAGAAGGAGGACGTGGCGCTCGTCAAGGAGTACAGATCCAAGGTCGAGGCCGAGCTCTCTGAGGTCTGCGCGTCGGAGCTCATCGTCGAGGAGCGCATCGAGCAGAAGGATGAGGGCCGCAAGAACGAGGAGGATGTGGCGCTCGTCAAGGAGTACAGATCCAAGGTCGAGGCCGAGCTCTCTGAGAGTCTTCTGGAAACCCATAGAAAAGGCTCTGCGGTTTTGTGTCGCTTGGAATTTTGTTTTTGTTTCTGCAACAAAAAGCGAGATATGGCAGCAGAGGAGGGACAAGTCGTCAGTGTCCACACTGTGGATGCATGGAACGAGCAGCTTCAGAAGGGAAACGACACCAAGAAACTGATGGTTGTTGATTTCACTGCTTCATGGTGTGGACCATGCCGCTTCATTGCGCCATTCTTGTCAGAGCTGGCCAAGAAGCTTCCAAATGTCATCTTCGTAAAGATTGATGTGGATGAGTTGAAGTCGGTTGCTCAAGATTGGGCTGTAGAGGCAATGCCGACCTTCATGTTTCTGAAAGAAGGGAAGATTGTGGACAAAGTGGTGGGAGCAAAGAAAGAGGAACTGCAGCAGACTGTAGCAAAGCACGTAGCTACTGCTTCTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

429

Amino Acids

48.11

Weight (kDa)

5.28

Isoelectric Point (pI)

32.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RTE1 PF05608 24 - 169 6.1e-68 RTE1-like
Thioredoxin PF00085 320 - 421 1.2e-29 Thioredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 393
Acc36I ACCTGC 1 cut(s) 413
AccB7I CCANNNNNTGG 1 cut(s) 973
AccII CGCG 1 cut(s) 734
AciI CCGC 5 cut(s) 113, 600, 781, 881, 1063
AclWI GGATC 3 cut(s) 314, 693, 816
AcoI YGGCCR 3 cut(s) 148, 512, 1092
AcsI RAATTY 2 cut(s) 374, 899
AcuI CTGAAG 3 cut(s) 341, 615, 980
AcyI GRCGYC 1 cut(s) 632
AdeI CACNNNGTG 1 cut(s) 973
AfaI GTAC 3 cut(s) 543, 695, 818
AfeI AGCGCT 1 cut(s) 606
AfiI CCNNNNNNNGG 2 cut(s) 146, 973
AflII CTTAAG 1 cut(s) 500
AgeI ACCGGT 1 cut(s) 384
AgsI TTSAA 1 cut(s) 1144
AhdI GACNNNNNGTC 1 cut(s) 956
AjiI CACGTC 1 cut(s) 676
AjnI CCWGG 1 cut(s) 322
Alw21I GWGCWC 6 cut(s) 27, 238, 642, 720, 744, 843
Alw26I GTCTC 2 cut(s) 9, 324
AlwI GGATC 3 cut(s) 314, 693, 816
Aor51HI AGCGCT 1 cut(s) 606
AoxI GGCC 6 cut(s) 148, 512, 711, 778, 834, 1092
ApeKI GCWGC 5 cut(s) 96, 485, 938, 991, 1249
ApoI RAATTY 2 cut(s) 374, 899
ArsI GACNNNNNNTTYG 2 cut(s) 212, 244
AsiGI ACCGGT 1 cut(s) 384
AspLEI GCGC 7 cut(s) 607, 657, 682, 734, 759, 805, 1075
AspS9I GGNCC 4 cut(s) 197, 621, 778, 1055
AsuC2I CCSGG 1 cut(s) 85
AsuHPI GGTGA 3 cut(s) 487, 518, 634
AvaII GGWCC 3 cut(s) 197, 621, 1055
BaeGI GKGCMC 1 cut(s) 368
BalI TGGCCA 3 cut(s) 150, 514, 1094
BanII GRGCYC 5 cut(s) 85, 642, 720, 744, 843
BbsI GAAGAC 1 cut(s) 845
Bbv12I GWGCWC 6 cut(s) 27, 238, 642, 720, 744, 843
BbvI GCAGC 5 cut(s) 83, 497, 950, 1003, 1261
BccI CCATC 5 cut(s) 35, 167, 298, 611, 1018
BceAI ACGGC 1 cut(s) 645
BciT130I CCWGG 1 cut(s) 324
BcnI CCSGG 1 cut(s) 85
BcoDI GTCTC 2 cut(s) 9, 324
BfmI CTRYAG 4 cut(s) 163, 1167, 1247, 1257
BfoI RGCGCY 3 cut(s) 608, 683, 806
BfrI CTTAAG 1 cut(s) 500
BfuAI ACCTGC 1 cut(s) 413
BglI GCCNNNNNGGC 1 cut(s) 156
BisI GCNGC 7 cut(s) 97, 486, 781, 939, 992, 1063, 1250
BlsI GCNGC 7 cut(s) 98, 487, 782, 940, 993, 1064, 1251
BmcAI AGTACT 1 cut(s) 543
Bme1390I CCNGG 2 cut(s) 85, 324
Bme18I GGWCC 3 cut(s) 197, 621, 1055
BmeRI GACNNNNNGTC 1 cut(s) 956
BmgBI CACGTC 1 cut(s) 676
BmgT120I GGNCC 4 cut(s) 197, 621, 778, 1055
BmiI GGNNCC 2 cut(s) 199, 622
BmrFI CCNGG 2 cut(s) 85, 324
BmsI GCATC 5 cut(s) 168, 340, 666, 768, 967
BpiI GAAGAC 1 cut(s) 845
BpuEI CTTGAG 1 cut(s) 1140
BpuMI CCSGG 1 cut(s) 85
BsaAI YACGTR 1 cut(s) 1270
BsaHI GRCGYC 1 cut(s) 632
BsaJI CCNNGG 4 cut(s) 213, 627, 702, 825
BsaWI WCCGGW 1 cut(s) 384
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 973
Bse118I RCCGGY 1 cut(s) 384
Bse1I ACTGG 1 cut(s) 515
Bse3DI GCAATG 2 cut(s) 1068, 1182
BseBI CCWGG 1 cut(s) 324
BseDI CCNNGG 4 cut(s) 213, 627, 702, 825
BseGI GGATG 7 cut(s) 223, 249, 352, 778, 802, 982, 1141
BseLI CCNNNNNNNGG 2 cut(s) 146, 973
BseMI GCAATG 2 cut(s) 1068, 1182
BseMII CTCAG 4 cut(s) 12, 285, 714, 837
BseNI ACTGG 1 cut(s) 515
BseRI GAGGAG 5 cut(s) 627, 665, 767, 806, 959
BseSI GKGCMC 1 cut(s) 368
BseXI GCAGC 5 cut(s) 83, 497, 950, 1003, 1261
Bsh1236I CGCG 1 cut(s) 734
BshFI GGCC 6 cut(s) 150, 514, 713, 780, 836, 1094
BshTI ACCGGT 1 cut(s) 384
BsiHKAI GWGCWC 6 cut(s) 27, 238, 642, 720, 744, 843
BsiSI CCGG 2 cut(s) 85, 385
BslFI GGGAC 1 cut(s) 963
BslI CCNNNNNNNGG 2 cut(s) 146, 973
BsmAI GTCTC 2 cut(s) 9, 324
BsmFI GGGAC 1 cut(s) 963
BsnI GGCC 6 cut(s) 150, 514, 713, 780, 836, 1094
Bsp1286I GDGCHC 8 cut(s) 27, 85, 238, 368, 642, 720, 744, 843
Bsp143I GATC 4 cut(s) 319, 583, 698, 821
BspACI CCGC 5 cut(s) 113, 600, 781, 881, 1063
BspANI GGCC 6 cut(s) 150, 514, 713, 780, 836, 1094
BspCNI CTCAG 4 cut(s) 13, 286, 715, 838
BspFNI CGCG 1 cut(s) 734
BspLI GGNNCC 2 cut(s) 199, 622
BspMAI CTGCAG 2 cut(s) 167, 1251
BspMI ACCTGC 1 cut(s) 413
BspPI GGATC 3 cut(s) 314, 693, 816
BspTI CTTAAG 1 cut(s) 500
BsrDI GCAATG 2 cut(s) 1068, 1182
BsrFI RCCGGY 1 cut(s) 384
BsrI ACTGG 1 cut(s) 515
BssAI RCCGGY 1 cut(s) 384
BssECI CCNNGG 4 cut(s) 213, 627, 702, 825
BssMI GATC 4 cut(s) 319, 583, 698, 821
BssNI GRCGYC 1 cut(s) 632
BssT1I CCWWGG 2 cut(s) 702, 825
Bst2UI CCWGG 1 cut(s) 324
Bst4CI ACNGT 3 cut(s) 646, 973, 1258
Bst6I CTCTTC 1 cut(s) 322
BstACI GRCGYC 1 cut(s) 632
BstAFI CTTAAG 1 cut(s) 500
BstBAI YACGTR 1 cut(s) 1270
BstC8I GCNNGC 1 cut(s) 1092
BstDEI CTNAG 5 cut(s) 21, 294, 587, 723, 846
BstDSI CCRYGG 2 cut(s) 213, 627
BstF5I GGATG 7 cut(s) 223, 249, 352, 778, 802, 982, 1141
BstFNI CGCG 1 cut(s) 734
BstH2I RGCGCY 3 cut(s) 608, 683, 806
BstHHI GCGC 7 cut(s) 607, 657, 682, 734, 759, 805, 1075
BstKTI GATC 4 cut(s) 322, 586, 701, 824
BstMAI GTCTC 2 cut(s) 9, 324
BstMBI GATC 4 cut(s) 319, 583, 698, 821
BstMWI GCNNNNNNNGC 5 cut(s) 156, 233, 661, 763, 1172
BstNI CCWGG 1 cut(s) 324
BstSCI CCNGG 2 cut(s) 83, 322
BstSFI CTRYAG 4 cut(s) 163, 1167, 1247, 1257
BstSLI GKGCMC 1 cut(s) 368
BstUI CGCG 1 cut(s) 734
BstV1I GCAGC 5 cut(s) 83, 497, 950, 1003, 1261
BstV2I GAAGAC 1 cut(s) 845
BstX2I RGATCY 2 cut(s) 698, 821
BstYI RGATCY 2 cut(s) 698, 821
BsuRI GGCC 6 cut(s) 150, 514, 713, 780, 836, 1094
BtgI CCRYGG 2 cut(s) 213, 627
BtrI CACGTC 1 cut(s) 676
BtsCI GGATG 7 cut(s) 223, 249, 352, 778, 802, 982, 1141
BtsI GCAGTG 2 cut(s) 312, 1038
BtsIMutI CAGTG 4 cut(s) 312, 967, 969, 1038
BveI ACCTGC 1 cut(s) 413
Cac8I GCNNGC 1 cut(s) 1092
CfoI GCGC 7 cut(s) 607, 657, 682, 734, 759, 805, 1075
Cfr10I RCCGGY 1 cut(s) 384
Cfr13I GGNCC 4 cut(s) 197, 621, 778, 1055
CseI GACGC 2 cut(s) 621, 723
Csp6I GTAC 3 cut(s) 542, 694, 817
CspAI ACCGGT 1 cut(s) 384
CviQI GTAC 3 cut(s) 542, 694, 817
DdeI CTNAG 5 cut(s) 21, 294, 587, 723, 846
DpnI GATC 4 cut(s) 321, 585, 700, 823
DpnII GATC 4 cut(s) 319, 583, 698, 821
DraIII CACNNNGTG 1 cut(s) 973
DriI GACNNNNNGTC 1 cut(s) 956
EaeI YGGCCR 3 cut(s) 148, 512, 1092
Eam1104I CTCTTC 1 cut(s) 322
Eam1105I GACNNNNNGTC 1 cut(s) 956
EarI CTCTTC 1 cut(s) 322
EciI GGCGGA 1 cut(s) 615
Ecl136II GAGCTC 4 cut(s) 640, 718, 742, 841
Eco130I CCWWGG 2 cut(s) 702, 825
Eco24I GRGCYC 5 cut(s) 85, 642, 720, 744, 843
Eco47I GGWCC 3 cut(s) 197, 621, 1055
Eco47III AGCGCT 1 cut(s) 606
Eco53kI GAGCTC 4 cut(s) 640, 718, 742, 841
Eco57I CTGAAG 3 cut(s) 341, 615, 980
EcoICRI GAGCTC 4 cut(s) 640, 718, 742, 841
EcoO109I RGGNCCY 1 cut(s) 197
EcoRI GAATTC 1 cut(s) 374
EcoRII CCWGG 1 cut(s) 322
EcoT14I CCWWGG 2 cut(s) 702, 825
EcoT22I ATGCAT 1 cut(s) 982
EcoT38I GRGCYC 5 cut(s) 85, 642, 720, 744, 843
ErhI CCWWGG 2 cut(s) 702, 825
FaqI GGGAC 1 cut(s) 963
Fnu4HI GCNGC 7 cut(s) 97, 486, 781, 939, 992, 1063, 1250
FokI GGATG 7 cut(s) 230, 236, 359, 785, 809, 989, 1148
FriOI GRGCYC 5 cut(s) 85, 642, 720, 744, 843
Fsp4HI GCNGC 7 cut(s) 97, 486, 781, 939, 992, 1063, 1250
GlaI GCGC 7 cut(s) 606, 656, 681, 733, 758, 804, 1074
GluI GCNGC 7 cut(s) 97, 486, 781, 939, 992, 1063, 1250
HaeII RGCGCY 3 cut(s) 608, 683, 806
HaeIII GGCC 6 cut(s) 150, 514, 713, 780, 836, 1094
HapII CCGG 2 cut(s) 85, 385
HgaI GACGC 2 cut(s) 621, 723
HhaI GCGC 7 cut(s) 607, 657, 682, 734, 759, 805, 1075
Hin1I GRCGYC 1 cut(s) 632
Hin6I GCGC 7 cut(s) 605, 655, 680, 732, 757, 803, 1073
HinP1I GCGC 7 cut(s) 605, 655, 680, 732, 757, 803, 1073
HindIII AAGCTT 2 cut(s) 448, 1100
HinfI GANTC 4 cut(s) 5, 17, 136, 850
HpaII CCGG 2 cut(s) 85, 385
HphI GGTGA 3 cut(s) 487, 518, 634
Hpy166II GTNNAC 6 cut(s) 108, 478, 624, 967, 1055, 1216
Hpy188III TCNNGA 3 cut(s) 521, 857, 1157
Hpy8I GTNNAC 6 cut(s) 108, 478, 624, 967, 1055, 1216
Hpy99I CGWCG 4 cut(s) 637, 650, 739, 752
HpyAV CCTTC 8 cut(s) 355, 568, 590, 661, 763, 994, 1195, 1196
HpyCH4III ACNGT 3 cut(s) 646, 973, 1258
HpyCH4IV ACGT 2 cut(s) 675, 1269
HpyF10VI GCNNNNNNNGC 5 cut(s) 156, 233, 661, 763, 1172
HpyF3I CTNAG 5 cut(s) 21, 294, 587, 723, 846
HpySE526I ACGT 2 cut(s) 675, 1269
Hsp92I GRCGYC 1 cut(s) 632
HspAI GCGC 7 cut(s) 605, 655, 680, 732, 757, 803, 1073
Kzo9I GATC 4 cut(s) 319, 583, 698, 821
LmnI GCTCC 7 cut(s) 233, 602, 637, 652, 739, 754, 1229
Lsp1109I GCAGC 5 cut(s) 83, 497, 950, 1003, 1261
LweI GCATC 5 cut(s) 168, 340, 666, 768, 967
MaeII ACGT 2 cut(s) 675, 1269
MalI GATC 4 cut(s) 321, 585, 700, 823
MboI GATC 4 cut(s) 319, 583, 698, 821
MboII GAAGA 6 cut(s) 182, 339, 487, 845, 1108, 1219
MfeI CAATTG 1 cut(s) 409
MflI RGATCY 2 cut(s) 698, 821
MhlI GDGCHC 8 cut(s) 27, 85, 238, 368, 642, 720, 744, 843
MlsI TGGCCA 3 cut(s) 150, 514, 1094
MluCI AATT 5 cut(s) 66, 202, 374, 409, 899
MluNI TGGCCA 3 cut(s) 150, 514, 1094
MlyI GAGTC 2 cut(s) 11, 859
MmeI TCCRAC 3 cut(s) 403, 615, 717
Mox20I TGGCCA 3 cut(s) 150, 514, 1094
Mph1103I ATGCAT 1 cut(s) 982
MscI TGGCCA 3 cut(s) 150, 514, 1094
MseI TTAA 3 cut(s) 438, 446, 501
Msp20I TGGCCA 3 cut(s) 150, 514, 1094
MspCI CTTAAG 1 cut(s) 500
MspI CCGG 2 cut(s) 85, 385
MspR9I CCNGG 2 cut(s) 85, 324
MunI CAATTG 1 cut(s) 409
MvaI CCWGG 1 cut(s) 324
MvnI CGCG 1 cut(s) 734
MwoI GCNNNNNNNGC 5 cut(s) 156, 233, 661, 763, 1172
NciI CCSGG 1 cut(s) 85
NdeII GATC 4 cut(s) 319, 583, 698, 821
NlaIV GGNNCC 2 cut(s) 199, 622
NmeAIII GCCGAG 2 cut(s) 739, 862
NsiI ATGCAT 1 cut(s) 982
PcsI WCGNNNNNNNCGW 1 cut(s) 681
PfeI GAWTC 2 cut(s) 5, 136
PflMI CCANNNNNTGG 1 cut(s) 973
PfoI TCCNGGA 1 cut(s) 322
PinAI ACCGGT 1 cut(s) 384
PkrI GCNGC 7 cut(s) 98, 487, 782, 940, 993, 1064, 1251
PleI GAGTC 2 cut(s) 11, 858
PpsI GAGTC 2 cut(s) 11, 858
Ppu21I YACGTR 1 cut(s) 1270
PpuMI RGGWCCY 1 cut(s) 197
PsiI TTATAA 1 cut(s) 393
Psp124BI GAGCTC 4 cut(s) 642, 720, 744, 843
Psp5II RGGWCCY 1 cut(s) 197
Psp6I CCWGG 1 cut(s) 322
PspGI CCWGG 1 cut(s) 322
PspN4I GGNNCC 2 cut(s) 199, 622
PspPI GGNCC 4 cut(s) 197, 621, 778, 1055
PspPPI RGGWCCY 1 cut(s) 197
PstI CTGCAG 2 cut(s) 167, 1251
PsuI RGATCY 2 cut(s) 698, 821
RsaI GTAC 3 cut(s) 543, 695, 818
RsaNI GTAC 3 cut(s) 542, 694, 817
SacI GAGCTC 4 cut(s) 642, 720, 744, 843
SaqAI TTAA 3 cut(s) 438, 446, 501
SatI GCNGC 7 cut(s) 97, 486, 781, 939, 992, 1063, 1250
Sau3AI GATC 4 cut(s) 319, 583, 698, 821
Sau96I GGNCC 4 cut(s) 197, 621, 778, 1055
ScaI AGTACT 1 cut(s) 543
SchI GAGTC 2 cut(s) 11, 859
ScrFI CCNGG 2 cut(s) 85, 324
SduI GDGCHC 8 cut(s) 27, 85, 238, 368, 642, 720, 744, 843
SfaNI GCATC 5 cut(s) 168, 340, 666, 768, 967
SfcI CTRYAG 4 cut(s) 163, 1167, 1247, 1257
SinI GGWCC 3 cut(s) 197, 621, 1055
SmlI CTYRAG 2 cut(s) 500, 1155
SmoI CTYRAG 2 cut(s) 500, 1155
Sse9I AATT 5 cut(s) 66, 202, 374, 409, 899
SsiI CCGC 5 cut(s) 113, 600, 781, 881, 1063
SstI GAGCTC 4 cut(s) 642, 720, 744, 843
StyD4I CCNGG 2 cut(s) 83, 322
StyI CCWWGG 2 cut(s) 702, 825
TaaI ACNGT 3 cut(s) 646, 973, 1258
TaiI ACGT 2 cut(s) 678, 1272
TaqI TCGA 6 cut(s) 648, 660, 708, 750, 762, 831
TasI AATT 5 cut(s) 66, 202, 374, 409, 899
TatI WGTACW 3 cut(s) 541, 693, 816
TauI GCSGC 2 cut(s) 783, 1065
TfiI GAWTC 2 cut(s) 5, 136
Tru1I TTAA 3 cut(s) 438, 446, 501
Tru9I TTAA 3 cut(s) 438, 446, 501
TscAI CASTG 4 cut(s) 312, 967, 976, 1045
TseI GCWGC 5 cut(s) 96, 485, 938, 991, 1249
TspDTI ATGAA 5 cut(s) 117, 315, 1035, 1057, 1177
TspGWI ACGGA 1 cut(s) 202
TspRI CASTG 4 cut(s) 312, 967, 976, 1045
Van91I CCANNNNNTGG 1 cut(s) 973
Vha464I CTTAAG 1 cut(s) 500
VpaK11BI GGWCC 3 cut(s) 197, 621, 1055
XapI RAATTY 2 cut(s) 374, 899
XcmI CCANNNNNNNNNTGG 1 cut(s) 1021
ZrmI AGTACT 1 cut(s) 543
Zsp2I ATGCAT 1 cut(s) 982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.