RLG00000022007

Peptidyl-prolyl cis-trans isomerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0011612
Physical Location & Seq
Forward (+)
79942984 .. 79950128
7145 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022007

Sequence Viewer

Length: 2115 bp
ATGGCAGCCATTATCTCCTGCCACTCCAAATTCTTAGGACCCAGCATACCCTTTAATGTTGGCACCCGCTTCCCAGTTTGCCGCAACCATTCTTCCCCAACTTCTATTCAATGTCGGATCCAGAACAACAAACAGAAAGGGAGTTCTTTTTCGATAGAGGAGTGTGCGATTTCAATAGCTTTGACGGTGGGGCTAATAACAGGAGTTCCTGCATTGGAATTGTCCAACAATGCGTATGCAGCTACCCGAGTGCTGCCTGATCTGGGTGTACTGATCTCCAGACCGCCAATAAAGGACCCTTGGGGCATTGCTATCAGGGAGGTACAAAAGCCACTTGAAGATATCACAGAGAGTCTCAAGATAGCTGGAGTCAAGGCACTAGATTCAACTGAGAGGAATTTGAGGCAGGCGTCTCGAGCACTGAAGCAGGGGAAGTCTTTAATTGTGACTGGATTAGCTGAATCGAAGAAGGATCATGGTGCTGAATTGCTTGGCAAGCTGGAAGTAGGAATGGATGAGCTCCAACAGATTGTGGAGGATAAATATAGAGATGGAATTGCTAAGAAACAGAAAGAACTACTACTCTATGTTGGAGGTAAATTTTATGATGGCATGGAAATCCAAAGAGCGGACGGATTTGTTGTACAAACTGGTGATCCTGAAAGACCTGCAGAGGTTTTCATTGATCCAAGTACCGAGAAAACGAGGACAATACCTTTAGAAATCTCTGTAGTTGGAGAGAAAGCACCCTTTTATGGAGCAACTTTGGAAGAACTGGGGCTATACAAGGCTCAGGCAAAGCTTCCATTTAACGCATTTGGAACAATGGCAATGGCCCGAGATGAATTTGAGAACAATTCTGCTTCGAGCCAGATATTTTGCTCTCCTCTGTTCATTGTGAGAAAAGTCATCAAAACTAAGTGTGTGAAATACATGCCATTCCTTCTCTCATTGGCCAATTTTCTGAACGGTTGTTGCTGGACTGCATACGCACTTATTGGAAACGGGACTACATTTTGGATATCATTGATTCGATTGCAAGAGATCATTGATTCACTCGTCCGACTGTTGAAAGAGAGGGATTTAGAGTTAGGTGCTGAAATTTTCGCTGGAGGTGTAGTATCACTGGTTGTCAACGATAGATTCTGGAGTCCTCATGCATTGCAGGTTAAGTTGAATTGCAGCTCCTTTTGGGTCAAGTCAAGTTGTAAGGTTGGATTATGTGTCATTGCACGCGATGCTGATCGTTCTCTAGTCTTTCCTGAATGTGTGCTTGGGGTGGCCACATCAGCACCTGATGCAGAAGCAAAAGCGTGCCTCATGGCTTTACGACTTGCCACAGAACAACTTGCAGGCCGACCATTTGTGCTTGAGTCTCGTTTTTTCCGAACGCCCTTCATGATGTTCAAAGATTTTGGCGCATCCTTGGCACCGCTGGTGGCTAGGTTAATCACCAGGTACCACCAGGAGAATATTCAATGGAGTAAGTGCGAAAGGTTTGAGAATCGAACTGCTTCAAGGATTGCCCTGCTTGCCTACCAGGATGTTGATGTTGATTCTAGTACTGTTGTACTTTATGCTGCTGTTTCTTCCGAATTGAGCCTTTGGCAACCCATTGCTAAAGGATCTATCAAGCTCAATTTTCATTCTGCATTTTCTAAAAGGAGTGGTGTAGGAATTGGTGGACTCTGTTCTCTGGTTCGGAATGATCATGGAGAGCTTATGGATGGTTTGGCTACCAAGGTGGTAGCAGGATTTCCATTCGATGCAGAAGTGAAGGTTGCGAAGCTTGCTTGTTCTGTTGCCTTGGATTATAAGAGTTTGAAGATCGAGTTCGAAGGTGGAAGTGAATTATTGACTAACCAAGTTGTTGGAAGAACGCTTCTGGATTCAAAGTGGACCGCAAGAAGGTTAGTGGATGATATAAAGCTTAGCTTAGGAGAGCTCACTGCTGGTAATTCCTGGTCCCATTGTGTGAAGACGGGCAATGTAGTGGCCTCCTACTTTTCATCCCTGTTGTGTGAAAGCGAATTTGTTGAAGGAGGGCAGTGGATGGTTGATCTTGAAGAGATTTTGAAGGAAGATATGAAGGCTGTTTCCGTAAGTGATGTGTGA

Protein Analysis

705

Amino Acids

77.26

Weight (kDa)

7.04

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CYP38_PsbQ-like PF21329 104 - 198 1.2e-26 Peptidyl-prolyl cis-trans isomerase CYP38-like, PsbQ-like domain
Pro_isomerase PF00160 188 - 293 8.4e-06 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
MtN3_slv PF03083 292 - 338 1.6e-10 Sugar efflux transporter for intercellular exchange
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1815
Acc36I ACCTGC 2 cut(s) 676, 1156
Acc65I GGTACC 1 cut(s) 1458
AccB1I GGYRCC 3 cut(s) 62, 1429, 1458
AccBSI CCGCTC 1 cut(s) 629
AccII CGCG 1 cut(s) 1236
AciI CCGC 6 cut(s) 67, 82, 284, 629, 1433, 1902
AclWI GGATC 6 cut(s) 112, 125, 480, 650, 680, 1633
AcoI YGGCCR 2 cut(s) 954, 1281
AcsI RAATTY 6 cut(s) 29, 397, 599, 845, 1101, 2030
AcuI CTGAAG 1 cut(s) 443
AcyI GRCGYC 1 cut(s) 410
AfaI GTAC 7 cut(s) 270, 324, 645, 694, 1460, 1564, 1572
AfiI CCNNNNNNNGG 4 cut(s) 263, 628, 755, 1908
AjnI CCWGG 4 cut(s) 1454, 1464, 1539, 1961
AjuI GAANNNNNNNTTGG 2 cut(s) 1257, 1289
Alw21I GWGCWC 3 cut(s) 421, 522, 1947
Alw26I GTCTC 3 cut(s) 359, 417, 1380
AlwI GGATC 6 cut(s) 112, 125, 480, 650, 680, 1633
AlwNI CAGNNNCTG 1 cut(s) 1295
Ama87I CYCGRG 3 cut(s) 246, 414, 837
AoxI GGCC 5 cut(s) 834, 954, 1281, 1354, 1995
ApeKI GCWGC 5 cut(s) 5, 239, 253, 1182, 1580
ApoI RAATTY 6 cut(s) 29, 397, 599, 845, 1101, 2030
Asp700I GAANNNNTTC 1 cut(s) 1513
Asp718I GGTACC 1 cut(s) 1458
AspLEI GCGC 1 cut(s) 1421
AspS9I GGNCC 5 cut(s) 38, 295, 835, 1899, 1965
AsuHPI GGTGA 2 cut(s) 665, 1444
AsuII TTCGAA 1 cut(s) 1836
AvaI CYCGRG 3 cut(s) 246, 414, 837
AvaII GGWCC 4 cut(s) 38, 295, 1899, 1965
BalI TGGCCA 2 cut(s) 956, 1283
BamHI GGATCC 1 cut(s) 117
BanI GGYRCC 3 cut(s) 62, 1429, 1458
BanII GRGCYC 2 cut(s) 522, 1947
BbsI GAAGAC 1 cut(s) 1985
Bbv12I GWGCWC 3 cut(s) 421, 522, 1947
BbvI GCAGC 5 cut(s) 17, 240, 251, 1194, 1567
BccI CCATC 4 cut(s) 545, 602, 1721, 2047
BcgI CGANNNNNNTGC 2 cut(s) 395, 429
BciT130I CCWGG 4 cut(s) 1456, 1466, 1541, 1963
BclI TGATCA 1 cut(s) 1708
BcoDI GTCTC 3 cut(s) 359, 417, 1380
BfaI CTAG 4 cut(s) 380, 1253, 1443, 1560
BfmI CTRYAG 2 cut(s) 669, 729
BfuAI ACCTGC 2 cut(s) 676, 1156
BisI GCNGC 6 cut(s) 6, 82, 240, 254, 1183, 1581
BlpI GCTNAGC 1 cut(s) 1931
BlsI GCNGC 6 cut(s) 7, 83, 241, 255, 1184, 1582
BmcAI AGTACT 1 cut(s) 1564
Bme1390I CCNGG 4 cut(s) 1456, 1466, 1541, 1963
Bme18I GGWCC 4 cut(s) 38, 295, 1899, 1965
BmeT110I CYCGRG 3 cut(s) 246, 414, 837
BmgT120I GGNCC 5 cut(s) 38, 295, 835, 1899, 1965
BmiI GGNNCC 7 cut(s) 40, 64, 119, 297, 1431, 1460, 1967
BmrFI CCNGG 4 cut(s) 1456, 1466, 1541, 1963
BmrI ACTGGG 2 cut(s) 68, 785
BmsI GCATC 4 cut(s) 1228, 1288, 1430, 1756
BmuI ACTGGG 2 cut(s) 68, 785
BpiI GAAGAC 1 cut(s) 1985
BpmI CTGGAG 4 cut(s) 262, 387, 1131, 1168
Bpu10I CCTNAGC 2 cut(s) 792, 1936
Bpu1102I GCTNAGC 1 cut(s) 1931
Bpu14I TTCGAA 1 cut(s) 1836
BpuEI CTTGAG 2 cut(s) 341, 1391
BsaBI GATNNNNATC 1 cut(s) 1242
BsaHI GRCGYC 1 cut(s) 410
BsaJI CCNNGG 4 cut(s) 299, 1425, 1740, 1806
BsaXI ACNNNNNCTCC 2 cut(s) 1104, 1134
Bsc4I CCNNNNNNNGG 4 cut(s) 263, 628, 755, 1908
Bse1I ACTGG 5 cut(s) 74, 454, 655, 780, 1131
Bse3DI GCAATG 6 cut(s) 306, 837, 1160, 1227, 1614, 1993
Bse8I GATNNNNATC 1 cut(s) 1242
BseBI CCWGG 4 cut(s) 1456, 1466, 1541, 1963
BseDI CCNNGG 4 cut(s) 299, 1425, 1740, 1806
BseGI GGATG 7 cut(s) 520, 1421, 1549, 1732, 1924, 2009, 2058
BseJI GATNNNNATC 1 cut(s) 1242
BseLI CCNNNNNNNGG 4 cut(s) 263, 628, 755, 1908
BseMI GCAATG 6 cut(s) 306, 837, 1160, 1227, 1614, 1993
BseMII CTCAG 2 cut(s) 381, 806
BseNI ACTGG 5 cut(s) 74, 454, 655, 780, 1131
BseRI GAGGAG 2 cut(s) 173, 876
BseXI GCAGC 5 cut(s) 17, 240, 251, 1194, 1567
BseYI CCCAGC 1 cut(s) 41
Bsh1236I CGCG 1 cut(s) 1236
BshFI GGCC 5 cut(s) 836, 956, 1283, 1356, 1997
BshNI GGYRCC 3 cut(s) 62, 1429, 1458
BsiHKAI GWGCWC 3 cut(s) 421, 522, 1947
BsiHKCI CYCGRG 3 cut(s) 246, 414, 837
BslFI GGGAC 2 cut(s) 1021, 1951
BslI CCNNNNNNNGG 4 cut(s) 263, 628, 755, 1908
BsmAI GTCTC 3 cut(s) 359, 417, 1380
BsmBI CGTCTC 1 cut(s) 417
BsmFI GGGAC 2 cut(s) 1021, 1951
BsnI GGCC 5 cut(s) 836, 956, 1283, 1356, 1997
BsoBI CYCGRG 3 cut(s) 246, 414, 837
Bsp119I TTCGAA 1 cut(s) 1836
Bsp1286I GDGCHC 3 cut(s) 421, 522, 1947
Bsp1407I TGTACA 1 cut(s) 643
Bsp1720I GCTNAGC 1 cut(s) 1931
BspACI CCGC 6 cut(s) 67, 82, 284, 629, 1433, 1902
BspANI GGCC 5 cut(s) 836, 956, 1283, 1356, 1997
BspCNI CTCAG 2 cut(s) 382, 805
BspFNI CGCG 1 cut(s) 1236
BspHI TCATGA 1 cut(s) 1398
BspLI GGNNCC 7 cut(s) 40, 64, 119, 297, 1431, 1460, 1967
BspMAI CTGCAG 1 cut(s) 673
BspMI ACCTGC 2 cut(s) 676, 1156
BspPI GGATC 6 cut(s) 112, 125, 480, 650, 680, 1633
BspT104I TTCGAA 1 cut(s) 1836
BspT107I GGYRCC 3 cut(s) 62, 1429, 1458
BsrBI CCGCTC 1 cut(s) 629
BsrDI GCAATG 6 cut(s) 306, 837, 1160, 1227, 1614, 1993
BsrGI TGTACA 1 cut(s) 643
BsrI ACTGG 5 cut(s) 74, 454, 655, 780, 1131
BssECI CCNNGG 4 cut(s) 299, 1425, 1740, 1806
BssNI GRCGYC 1 cut(s) 410
BssT1I CCWWGG 4 cut(s) 299, 1425, 1740, 1806
Bst2UI CCWGG 4 cut(s) 1456, 1466, 1541, 1963
Bst4CI ACNGT 4 cut(s) 187, 971, 1068, 1567
Bst6I CTCTTC 1 cut(s) 2061
BstACI GRCGYC 1 cut(s) 410
BstAPI GCANNNNNTGC 2 cut(s) 1238, 1298
BstAUI TGTACA 1 cut(s) 643
BstBI TTCGAA 1 cut(s) 1836
BstC8I GCNNGC 7 cut(s) 408, 497, 1234, 1315, 1354, 1533, 1791
BstDEI CTNAG 7 cut(s) 34, 390, 561, 792, 918, 1931, 1936
BstF5I GGATG 7 cut(s) 520, 1421, 1549, 1732, 1924, 2009, 2058
BstFNI CGCG 1 cut(s) 1236
BstHHI GCGC 1 cut(s) 1421
BstMAI GTCTC 3 cut(s) 359, 417, 1380
BstMWI GCNNNNNNNGC 9 cut(s) 239, 416, 496, 1238, 1289, 1298, 1427, 1532, 1790
BstNI CCWGG 4 cut(s) 1456, 1466, 1541, 1963
BstNSI RCATGY 1 cut(s) 937
BstSCI CCNGG 4 cut(s) 1454, 1464, 1539, 1961
BstSFI CTRYAG 2 cut(s) 669, 729
BstUI CGCG 1 cut(s) 1236
BstV1I GCAGC 5 cut(s) 17, 240, 251, 1194, 1567
BstV2I GAAGAC 1 cut(s) 1985
BstX2I RGATCY 2 cut(s) 117, 1625
BstXI CCANNNNNNTGG 1 cut(s) 1871
BstYI RGATCY 2 cut(s) 117, 1625
BsuRI GGCC 5 cut(s) 836, 956, 1283, 1356, 1997
BtgZI GCGATG 1 cut(s) 1251
BtsCI GGATG 7 cut(s) 520, 1421, 1549, 1732, 1924, 2009, 2058
BtsI GCAGTG 2 cut(s) 1947, 2054
BtsIMutI CAGTG 4 cut(s) 419, 1124, 1947, 2054
BveI ACCTGC 2 cut(s) 676, 1156
Cac8I GCNNGC 7 cut(s) 408, 497, 1234, 1315, 1354, 1533, 1791
CaiI CAGNNNCTG 1 cut(s) 1295
CciI TCATGA 1 cut(s) 1398
CfoI GCGC 1 cut(s) 1421
Cfr13I GGNCC 5 cut(s) 38, 295, 835, 1899, 1965
CseI GACGC 1 cut(s) 399
CsiI ACCWGGT 1 cut(s) 1454
Csp6I GTAC 7 cut(s) 269, 323, 644, 693, 1459, 1563, 1571
CviAII CATG 7 cut(s) 476, 613, 934, 1157, 1321, 1399, 1712
CviQI GTAC 7 cut(s) 269, 323, 644, 693, 1459, 1563, 1571
DdeI CTNAG 7 cut(s) 34, 390, 561, 792, 918, 1931, 1936
EaeI YGGCCR 2 cut(s) 954, 1281
Eam1104I CTCTTC 1 cut(s) 2061
EarI CTCTTC 1 cut(s) 2061
Ecl136II GAGCTC 2 cut(s) 520, 1945
Eco130I CCWWGG 4 cut(s) 299, 1425, 1740, 1806
Eco24I GRGCYC 2 cut(s) 522, 1947
Eco32I GATATC 2 cut(s) 343, 1023
Eco47I GGWCC 4 cut(s) 38, 295, 1899, 1965
Eco53kI GAGCTC 2 cut(s) 520, 1945
Eco57I CTGAAG 1 cut(s) 443
Eco88I CYCGRG 3 cut(s) 246, 414, 837
EcoICRI GAGCTC 2 cut(s) 520, 1945
EcoO109I RGGNCCY 2 cut(s) 38, 295
EcoRII CCWGG 4 cut(s) 1454, 1464, 1539, 1961
EcoRV GATATC 2 cut(s) 343, 1023
EcoT14I CCWWGG 4 cut(s) 299, 1425, 1740, 1806
EcoT22I ATGCAT 1 cut(s) 1162
EcoT38I GRGCYC 2 cut(s) 522, 1947
ErhI CCWWGG 4 cut(s) 299, 1425, 1740, 1806
Esp3I CGTCTC 1 cut(s) 417
FaeI CATG 7 cut(s) 479, 616, 937, 1160, 1324, 1402, 1715
FalI AAGNNNNNCTT 2 cut(s) 1919, 1951
FaqI GGGAC 2 cut(s) 1021, 1951
FatI CATG 7 cut(s) 475, 612, 933, 1156, 1320, 1398, 1711
FauI CCCGC 1 cut(s) 74
FbaI TGATCA 1 cut(s) 1708
Fnu4HI GCNGC 6 cut(s) 6, 82, 240, 254, 1183, 1581
FokI GGATG 7 cut(s) 527, 1408, 1556, 1739, 1931, 1996, 2065
FriOI GRGCYC 2 cut(s) 522, 1947
Fsp4HI GCNGC 6 cut(s) 6, 82, 240, 254, 1183, 1581
FspBI CTAG 4 cut(s) 380, 1253, 1443, 1560
GlaI GCGC 1 cut(s) 1420
GluI GCNGC 6 cut(s) 6, 82, 240, 254, 1183, 1581
GsaI CCCAGC 1 cut(s) 45
GsuI CTGGAG 4 cut(s) 262, 387, 1131, 1168
HaeIII GGCC 5 cut(s) 836, 956, 1283, 1356, 1997
HgaI GACGC 1 cut(s) 399
HhaI GCGC 1 cut(s) 1421
Hin1I GRCGYC 1 cut(s) 410
Hin1II CATG 7 cut(s) 479, 616, 937, 1160, 1324, 1402, 1715
Hin6I GCGC 1 cut(s) 1419
HinP1I GCGC 1 cut(s) 1419
HincII GTYRAC 1 cut(s) 1135
HindII GTYRAC 1 cut(s) 1135
HindIII AAGCTT 3 cut(s) 800, 1787, 1928
HphI GGTGA 2 cut(s) 665, 1444
Hpy166II GTNNAC 4 cut(s) 269, 1135, 1685, 1899
Hpy188I TCNGA 6 cut(s) 117, 966, 1064, 1388, 1594, 1704
Hpy8I GTNNAC 4 cut(s) 269, 1135, 1685, 1899
HpyAV CCTTC 9 cut(s) 463, 953, 1405, 1771, 1832, 1902, 2033, 2071, 2083
HpyCH4III ACNGT 4 cut(s) 187, 971, 1068, 1567
HpyF10VI GCNNNNNNNGC 9 cut(s) 239, 416, 496, 1238, 1289, 1298, 1427, 1532, 1790
HpyF3I CTNAG 7 cut(s) 34, 390, 561, 792, 918, 1931, 1936
Hsp92I GRCGYC 1 cut(s) 410
Hsp92II CATG 7 cut(s) 479, 616, 937, 1160, 1324, 1402, 1715
HspAI GCGC 1 cut(s) 1419
KpnI GGTACC 1 cut(s) 1462
Ksp22I TGATCA 1 cut(s) 1708
LmnI GCTCC 3 cut(s) 525, 758, 1190
Lsp1109I GCAGC 5 cut(s) 17, 240, 251, 1194, 1567
LweI GCATC 4 cut(s) 1228, 1288, 1430, 1756
MabI ACCWGGT 1 cut(s) 1454
MaeI CTAG 4 cut(s) 380, 1253, 1443, 1560
MaeIII GTNAC 1 cut(s) 445
MbiI CCGCTC 1 cut(s) 629
MflI RGATCY 2 cut(s) 117, 1625
MhlI GDGCHC 3 cut(s) 421, 522, 1947
MlsI TGGCCA 2 cut(s) 956, 1283
MluNI TGGCCA 2 cut(s) 956, 1283
MlyI GAGTC 5 cut(s) 361, 378, 1159, 1382, 1680
MmeI TCCRAC 8 cut(s) 95, 249, 547, 571, 715, 1087, 1195, 1852
Mox20I TGGCCA 2 cut(s) 956, 1283
Mph1103I ATGCAT 1 cut(s) 1162
MroXI GAANNNNTTC 1 cut(s) 1513
MscI TGGCCA 2 cut(s) 956, 1283
MseI TTAA 5 cut(s) 54, 440, 810, 1170, 1448
Msp20I TGGCCA 2 cut(s) 956, 1283
MspA1I CMGCKG 1 cut(s) 1435
MspR9I CCNGG 4 cut(s) 1456, 1466, 1541, 1963
MvaI CCWGG 4 cut(s) 1456, 1466, 1541, 1963
MvnI CGCG 1 cut(s) 1236
MwoI GCNNNNNNNGC 9 cut(s) 239, 416, 496, 1238, 1289, 1298, 1427, 1532, 1790
NlaIII CATG 7 cut(s) 479, 616, 937, 1160, 1324, 1402, 1715
NlaIV GGNNCC 7 cut(s) 40, 64, 119, 297, 1431, 1460, 1967
NmuCI GTSAC 1 cut(s) 445
NsiI ATGCAT 1 cut(s) 1162
NspI RCATGY 1 cut(s) 937
NspV TTCGAA 1 cut(s) 1836
PaeR7I CTCGAG 1 cut(s) 414
PagI TCATGA 1 cut(s) 1398
PcsI WCGNNNNNNNCGW 1 cut(s) 1384
PdmI GAANNNNTTC 1 cut(s) 1513
PfeI GAWTC 8 cut(s) 383, 461, 1030, 1052, 1143, 1504, 1556, 1889
PkrI GCNGC 6 cut(s) 7, 83, 241, 255, 1184, 1582
PleI GAGTC 5 cut(s) 360, 377, 1158, 1381, 1680
PpsI GAGTC 5 cut(s) 360, 377, 1158, 1381, 1680
PpuMI RGGWCCY 2 cut(s) 38, 295
PsiI TTATAA 1 cut(s) 1815
Psp124BI GAGCTC 2 cut(s) 522, 1947
Psp5II RGGWCCY 2 cut(s) 38, 295
Psp6I CCWGG 4 cut(s) 1454, 1464, 1539, 1961
PspFI CCCAGC 1 cut(s) 41
PspGI CCWGG 4 cut(s) 1454, 1464, 1539, 1961
PspN4I GGNNCC 7 cut(s) 40, 64, 119, 297, 1431, 1460, 1967
PspPI GGNCC 5 cut(s) 38, 295, 835, 1899, 1965
PspPPI RGGWCCY 2 cut(s) 38, 295
PstI CTGCAG 1 cut(s) 673
PstNI CAGNNNCTG 1 cut(s) 1295
PsuI RGATCY 2 cut(s) 117, 1625
RsaI GTAC 7 cut(s) 270, 324, 645, 694, 1460, 1564, 1572
RsaNI GTAC 7 cut(s) 269, 323, 644, 693, 1459, 1563, 1571
SacI GAGCTC 2 cut(s) 522, 1947
SaqAI TTAA 5 cut(s) 54, 440, 810, 1170, 1448
SatI GCNGC 6 cut(s) 6, 82, 240, 254, 1183, 1581
Sau96I GGNCC 5 cut(s) 38, 295, 835, 1899, 1965
ScaI AGTACT 1 cut(s) 1564
SchI GAGTC 5 cut(s) 361, 378, 1159, 1382, 1680
ScrFI CCNGG 4 cut(s) 1456, 1466, 1541, 1963
SduI GDGCHC 3 cut(s) 421, 522, 1947
SexAI ACCWGGT 1 cut(s) 1454
SfaNI GCATC 4 cut(s) 1228, 1288, 1430, 1756
SfcI CTRYAG 2 cut(s) 669, 729
Sfr274I CTCGAG 1 cut(s) 414
SfuI TTCGAA 1 cut(s) 1836
SinI GGWCC 4 cut(s) 38, 295, 1899, 1965
SlaI CTCGAG 1 cut(s) 414
SmlI CTYRAG 3 cut(s) 356, 414, 1370
SmoI CTYRAG 3 cut(s) 356, 414, 1370
SsiI CCGC 6 cut(s) 67, 82, 284, 629, 1433, 1902
SspI AATATT 1 cut(s) 1474
SspMI CTAG 4 cut(s) 380, 1253, 1443, 1560
SstI GAGCTC 2 cut(s) 522, 1947
StyD4I CCNGG 4 cut(s) 1454, 1464, 1539, 1961
StyI CCWWGG 4 cut(s) 299, 1425, 1740, 1806
TaaI ACNGT 4 cut(s) 187, 971, 1068, 1567
TaqI TCGA 9 cut(s) 152, 415, 464, 866, 1033, 1507, 1764, 1830, 1836
TatI WGTACW 4 cut(s) 268, 643, 1562, 1570
TauI GCSGC 1 cut(s) 84
TfiI GAWTC 8 cut(s) 383, 461, 1030, 1052, 1143, 1504, 1556, 1889
Tru1I TTAA 5 cut(s) 54, 440, 810, 1170, 1448
Tru9I TTAA 5 cut(s) 54, 440, 810, 1170, 1448
TscAI CASTG 4 cut(s) 426, 1131, 1954, 2054
TseFI GTSAC 1 cut(s) 445
TseI GCWGC 5 cut(s) 5, 239, 253, 1182, 1580
Tsp45I GTSAC 1 cut(s) 445
TspDTI ATGAA 7 cut(s) 670, 858, 883, 1387, 1634, 1998, 2102
TspGWI ACGGA 2 cut(s) 648, 2089
TspRI CASTG 4 cut(s) 426, 1131, 1954, 2054
VpaK11BI GGWCC 4 cut(s) 38, 295, 1899, 1965
XapI RAATTY 6 cut(s) 29, 397, 599, 845, 1101, 2030
XceI RCATGY 1 cut(s) 937
XhoI CTCGAG 1 cut(s) 414
XmnI GAANNNNTTC 1 cut(s) 1513
XspI CTAG 4 cut(s) 380, 1253, 1443, 1560
ZrmI AGTACT 1 cut(s) 1564
Zsp2I ATGCAT 1 cut(s) 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.