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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g27954 |
| malus_domestica | MD00G1096100.v1.1 |
| prunus_persica | Prupe.4G287800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0496761 |
| rosa_laevigata | RLG00000022458 RLG00000022506 |
| rosa_multiflora | Rmu_sc0000542.1_g000009 Rmu_sc0001832.1_g000011 |
| rosa_roxburghii | Rroxscaffold_6G00388030 |
| rosa_rugosa | Rorug03G0286800 |
| rosa_samantha | Rh3AG331200 Rh3BG367800 Rh3CG363900 Rh3DG367200 |
| rosa_wichuraiana | Rw0G004010 Rw3G029000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 372, 423 |
| Acc36I | ACCTGC | 1 cut(s) | 934 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1030 |
| AccI | GTMKAC | 1 cut(s) | 915 |
| AccII | CGCG | 1 cut(s) | 179 |
| AciI | CCGC | 4 cut(s) | 179, 429, 561, 870 |
| AcsI | RAATTY | 8 cut(s) | 441, 511, 645, 697, 794, 833, 906, 1070 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 668, 1030 |
| AgsI | TTSAA | 6 cut(s) | 467, 520, 548, 703, 800, 1130 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1056, 1088 |
| AluBI | AGCT | 8 cut(s) | 379, 388, 533, 544, 666, 709, 1048, 1081 |
| AluI | AGCT | 8 cut(s) | 379, 388, 533, 544, 666, 709, 1048, 1081 |
| Alw21I | GWGCWC | 1 cut(s) | 535 |
| Alw26I | GTCTC | 2 cut(s) | 166, 357 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1100 |
| Ama87I | CYCGRG | 3 cut(s) | 528, 667, 806 |
| ApeKI | GCWGC | 1 cut(s) | 940 |
| ApoI | RAATTY | 8 cut(s) | 441, 511, 645, 697, 794, 833, 906, 1070 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 963, 995 |
| AsuII | TTCGAA | 2 cut(s) | 149, 253 |
| AvaI | CYCGRG | 3 cut(s) | 528, 667, 806 |
| BanII | GRGCYC | 1 cut(s) | 535 |
| BbsI | GAAGAC | 2 cut(s) | 138, 474 |
| Bbv12I | GWGCWC | 1 cut(s) | 535 |
| BbvI | GCAGC | 1 cut(s) | 952 |
| BccI | CCATC | 2 cut(s) | 115, 215 |
| BceAI | ACGGC | 1 cut(s) | 292 |
| BcoDI | GTCTC | 2 cut(s) | 166, 357 |
| BfaI | CTAG | 2 cut(s) | 681, 1049 |
| BfuAI | ACCTGC | 1 cut(s) | 934 |
| BisI | GCNGC | 2 cut(s) | 562, 941 |
| BlsI | GCNGC | 2 cut(s) | 563, 942 |
| BmeT110I | CYCGRG | 3 cut(s) | 528, 667, 806 |
| BmiI | GGNNCC | 2 cut(s) | 126, 859 |
| BmsI | GCATC | 2 cut(s) | 875, 897 |
| BpiI | GAAGAC | 2 cut(s) | 138, 474 |
| BpmI | CTGGAG | 1 cut(s) | 707 |
| Bpu10I | CCTNAGC | 1 cut(s) | 329 |
| Bpu14I | TTCGAA | 2 cut(s) | 149, 253 |
| BpuEI | CTTGAG | 2 cut(s) | 107, 374 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 668, 1030 |
| Bse1I | ACTGG | 4 cut(s) | 690, 714, 911, 1024 |
| Bse3DI | GCAATG | 1 cut(s) | 571 |
| BseGI | GGATG | 2 cut(s) | 10, 866 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 668, 1030 |
| BseMI | GCAATG | 1 cut(s) | 571 |
| BseMII | CTCAG | 1 cut(s) | 161 |
| BseNI | ACTGG | 4 cut(s) | 690, 714, 911, 1024 |
| BseRI | GAGGAG | 5 cut(s) | 30, 33, 42, 45, 236 |
| BseXI | GCAGC | 1 cut(s) | 952 |
| Bsh1236I | CGCG | 1 cut(s) | 179 |
| BsiHKAI | GWGCWC | 1 cut(s) | 535 |
| BsiHKCI | CYCGRG | 3 cut(s) | 528, 667, 806 |
| BslFI | GGGAC | 1 cut(s) | 150 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 668, 1030 |
| BsmAI | GTCTC | 2 cut(s) | 166, 357 |
| BsmFI | GGGAC | 1 cut(s) | 150 |
| BsmI | GAATGC | 2 cut(s) | 330, 1070 |
| BsoBI | CYCGRG | 3 cut(s) | 528, 667, 806 |
| Bsp119I | TTCGAA | 2 cut(s) | 149, 253 |
| Bsp1286I | GDGCHC | 1 cut(s) | 535 |
| Bsp143I | GATC | 3 cut(s) | 82, 578, 619 |
| BspACI | CCGC | 4 cut(s) | 179, 429, 561, 870 |
| BspCNI | CTCAG | 1 cut(s) | 162 |
| BspFNI | CGCG | 1 cut(s) | 179 |
| BspHI | TCATGA | 2 cut(s) | 117, 981 |
| BspLI | GGNNCC | 2 cut(s) | 126, 859 |
| BspMI | ACCTGC | 1 cut(s) | 934 |
| BspQI | GCTCTTC | 1 cut(s) | 386 |
| BspT104I | TTCGAA | 2 cut(s) | 149, 253 |
| BsrDI | GCAATG | 1 cut(s) | 571 |
| BsrI | ACTGG | 4 cut(s) | 690, 714, 911, 1024 |
| BssMI | GATC | 3 cut(s) | 82, 578, 619 |
| Bst4CI | ACNGT | 2 cut(s) | 134, 979 |
| Bst6I | CTCTTC | 1 cut(s) | 386 |
| BstBI | TTCGAA | 2 cut(s) | 149, 253 |
| BstDEI | CTNAG | 3 cut(s) | 170, 329, 1082 |
| BstF5I | GGATG | 2 cut(s) | 10, 866 |
| BstFNI | CGCG | 1 cut(s) | 179 |
| BstKTI | GATC | 3 cut(s) | 85, 581, 622 |
| BstMAI | GTCTC | 2 cut(s) | 166, 357 |
| BstMBI | GATC | 3 cut(s) | 82, 578, 619 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 108, 325, 385, 940 |
| BstUI | CGCG | 1 cut(s) | 179 |
| BstV1I | GCAGC | 1 cut(s) | 952 |
| BstV2I | GAAGAC | 2 cut(s) | 138, 474 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 135 |
| BtsCI | GGATG | 2 cut(s) | 10, 866 |
| BtsIMutI | CAGTG | 3 cut(s) | 201, 918, 1031 |
| BveI | ACCTGC | 1 cut(s) | 934 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1100 |
| CciI | TCATGA | 2 cut(s) | 117, 981 |
| CseI | GACGC | 1 cut(s) | 308 |
| CviAII | CATG | 5 cut(s) | 107, 118, 838, 950, 982 |
| DdeI | CTNAG | 3 cut(s) | 170, 329, 1082 |
| DpnI | GATC | 3 cut(s) | 84, 580, 621 |
| DpnII | GATC | 3 cut(s) | 82, 578, 619 |
| Eam1104I | CTCTTC | 1 cut(s) | 386 |
| EarI | CTCTTC | 1 cut(s) | 386 |
| EciI | GGCGGA | 1 cut(s) | 859 |
| Ecl136II | GAGCTC | 1 cut(s) | 533 |
| Eco24I | GRGCYC | 1 cut(s) | 535 |
| Eco53kI | GAGCTC | 1 cut(s) | 533 |
| Eco88I | CYCGRG | 3 cut(s) | 528, 667, 806 |
| EcoICRI | GAGCTC | 1 cut(s) | 533 |
| EcoT38I | GRGCYC | 1 cut(s) | 535 |
| FaeI | CATG | 5 cut(s) | 110, 121, 841, 953, 985 |
| FaqI | GGGAC | 1 cut(s) | 150 |
| FatI | CATG | 5 cut(s) | 106, 117, 837, 949, 981 |
| FblI | GTMKAC | 1 cut(s) | 915 |
| Fnu4HI | GCNGC | 2 cut(s) | 562, 941 |
| FokI | GGATG | 2 cut(s) | 17, 853 |
| FriOI | GRGCYC | 1 cut(s) | 535 |
| Fsp4HI | GCNGC | 2 cut(s) | 562, 941 |
| FspBI | CTAG | 2 cut(s) | 681, 1049 |
| GluI | GCNGC | 2 cut(s) | 562, 941 |
| GsuI | CTGGAG | 1 cut(s) | 707 |
| HgaI | GACGC | 1 cut(s) | 308 |
| Hin1II | CATG | 5 cut(s) | 110, 121, 841, 953, 985 |
| HinfI | GANTC | 9 cut(s) | 139, 174, 182, 239, 255, 804, 1055, 1097, 1130 |
| Hpy166II | GTNNAC | 2 cut(s) | 916, 1054 |
| Hpy188I | TCNGA | 3 cut(s) | 893, 1045, 1148 |
| Hpy188III | TCNNGA | 6 cut(s) | 86, 118, 391, 600, 669, 982 |
| Hpy8I | GTNNAC | 2 cut(s) | 916, 1054 |
| Hpy99I | CGWCG | 1 cut(s) | 324 |
| HpyAV | CCTTC | 3 cut(s) | 29, 465, 494 |
| HpyCH4III | ACNGT | 2 cut(s) | 134, 979 |
| HpyCH4IV | ACGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 9 cut(s) | 55, 102, 501, 841, 866, 888, 940, 966, 1068 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 108, 325, 385, 940 |
| HpyF3I | CTNAG | 3 cut(s) | 170, 329, 1082 |
| HpySE526I | ACGT | 1 cut(s) | 163 |
| Hsp92II | CATG | 5 cut(s) | 110, 121, 841, 953, 985 |
| Kzo9I | GATC | 3 cut(s) | 82, 578, 619 |
| LguI | GCTCTTC | 1 cut(s) | 386 |
| LmnI | GCTCC | 1 cut(s) | 130 |
| LpnPI | CCDG | 9 cut(s) | 182, 398, 420, 671, 727, 924, 929, 1037, 1107 |
| Lsp1109I | GCAGC | 1 cut(s) | 952 |
| LweI | GCATC | 2 cut(s) | 875, 897 |
| MaeI | CTAG | 2 cut(s) | 681, 1049 |
| MaeII | ACGT | 1 cut(s) | 163 |
| MaeIII | GTNAC | 1 cut(s) | 494 |
| MalI | GATC | 3 cut(s) | 84, 580, 621 |
| MboI | GATC | 3 cut(s) | 82, 578, 619 |
| MboII | GAAGA | 7 cut(s) | 106, 138, 362, 373, 479, 706, 1007 |
| MhlI | GDGCHC | 1 cut(s) | 535 |
| MlyI | GAGTC | 6 cut(s) | 168, 176, 233, 798, 1049, 1091 |
| MmeI | TCCRAC | 1 cut(s) | 116 |
| MseI | TTAA | 3 cut(s) | 212, 749, 881 |
| MslI | CAYNNNNRTG | 2 cut(s) | 345, 1024 |
| Mva1269I | GAATGC | 2 cut(s) | 330, 1070 |
| MvnI | CGCG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 108, 325, 385, 940 |
| NdeII | GATC | 3 cut(s) | 82, 578, 619 |
| NlaIII | CATG | 5 cut(s) | 110, 121, 841, 953, 985 |
| NlaIV | GGNNCC | 2 cut(s) | 126, 859 |
| NspV | TTCGAA | 2 cut(s) | 149, 253 |
| PaeR7I | CTCGAG | 2 cut(s) | 528, 806 |
| PagI | TCATGA | 2 cut(s) | 117, 981 |
| PciSI | GCTCTTC | 1 cut(s) | 386 |
| PctI | GAATGC | 2 cut(s) | 330, 1070 |
| PfeI | GAWTC | 3 cut(s) | 139, 255, 1130 |
| PflFI | GACNNNGTC | 2 cut(s) | 190, 473 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1030 |
| PkrI | GCNGC | 2 cut(s) | 563, 942 |
| PleI | GAGTC | 6 cut(s) | 168, 176, 233, 798, 1049, 1091 |
| PpsI | GAGTC | 6 cut(s) | 168, 176, 233, 798, 1049, 1091 |
| PsiI | TTATAA | 2 cut(s) | 372, 423 |
| Psp124BI | GAGCTC | 1 cut(s) | 535 |
| PspN4I | GGNNCC | 2 cut(s) | 126, 859 |
| PspXI | VCTCGAGB | 2 cut(s) | 528, 806 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1100 |
| PsyI | GACNNNGTC | 2 cut(s) | 190, 473 |
| RseI | CAYNNNNRTG | 2 cut(s) | 345, 1024 |
| SacI | GAGCTC | 1 cut(s) | 535 |
| SapI | GCTCTTC | 1 cut(s) | 386 |
| SaqAI | TTAA | 3 cut(s) | 212, 749, 881 |
| SatI | GCNGC | 2 cut(s) | 562, 941 |
| Sau3AI | GATC | 3 cut(s) | 82, 578, 619 |
| SchI | GAGTC | 6 cut(s) | 168, 176, 233, 798, 1049, 1091 |
| SduI | GDGCHC | 1 cut(s) | 535 |
| SfaNI | GCATC | 2 cut(s) | 875, 897 |
| Sfr274I | CTCGAG | 2 cut(s) | 528, 806 |
| SfuI | TTCGAA | 2 cut(s) | 149, 253 |
| SlaI | CTCGAG | 2 cut(s) | 528, 806 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 345, 1024 |
| SmlI | CTYRAG | 4 cut(s) | 86, 389, 528, 806 |
| SmoI | CTYRAG | 4 cut(s) | 86, 389, 528, 806 |
| SsiI | CCGC | 4 cut(s) | 179, 429, 561, 870 |
| SspI | AATATT | 2 cut(s) | 616, 721 |
| SspMI | CTAG | 2 cut(s) | 681, 1049 |
| SstI | GAGCTC | 1 cut(s) | 535 |
| TaaI | ACNGT | 2 cut(s) | 134, 979 |
| TaiI | ACGT | 1 cut(s) | 166 |
| TaqI | TCGA | 9 cut(s) | 149, 185, 253, 307, 322, 529, 599, 622, 807 |
| TauI | GCSGC | 1 cut(s) | 564 |
| TfiI | GAWTC | 3 cut(s) | 139, 255, 1130 |
| Tru1I | TTAA | 3 cut(s) | 212, 749, 881 |
| Tru9I | TTAA | 3 cut(s) | 212, 749, 881 |
| TscAI | CASTG | 3 cut(s) | 201, 925, 1031 |
| TseI | GCWGC | 1 cut(s) | 940 |
| TspDTI | ATGAA | 9 cut(s) | 106, 221, 363, 621, 807, 826, 938, 998, 1077 |
| TspGWI | ACGGA | 2 cut(s) | 132, 437 |
| TspRI | CASTG | 3 cut(s) | 201, 925, 1031 |
| Tth111I | GACNNNGTC | 2 cut(s) | 190, 473 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1030 |
| XapI | RAATTY | 8 cut(s) | 441, 511, 645, 697, 794, 833, 906, 1070 |
| XhoI | CTCGAG | 2 cut(s) | 528, 806 |
| XmiI | GTMKAC | 1 cut(s) | 915 |
| XspI | CTAG | 2 cut(s) | 681, 1049 |