RLG00000023029

Phosphoinositide 3-kinase regulatory subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0017031
Physical Location & Seq
Reverse (-)
16874949 .. 16878245
3297 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023029

Sequence Viewer

Length: 828 bp
ATGTCATCTGCTTGTGGTTTGGAAATTGATGCATGTGCTGATACTAAAGCATCTCAGAACTTGAAAAGCTTGTGTGGTTTGGAGATTGATTTGCTGTTTATTTCAAGCGGCGACTCCATCGATCTCCCTCACCTTTGGCCCTTCCAGTTTTGGCAAGAGACGGATAAAGCAGCTGATCTTGTGAGACAATACTTCTTGAATAATCTACATGAGGAAGAAGAAGAAAGCAATAGAGCAGAAGAAGAAAGATGGCGAGGTAAGATAGCGCCATTACAGTTTTTTCTCCCGACGACCAGCTCTTCCAGGTCGAGTACGCCCTCGAAGCCGTGCGAAAGGGTAACGCCGCCGTCGGCGTCCGTGGCACCGACACCATCGTTCTTGGCGTCGAGAAGAAGTCCACCGCCAAGCTTCAGGACTCCAGGGAATTATAACCTATACATACTCGTATATATCTTCCGCGTTTGCTGTGACATGCGCCCAAAACTGGAGCCTGGAGCCTCAAGTCTGAAGCCTAAAGAGAGCAAAGCTAAAGCAGTCGTAAAATGGAGAGTAGTGAAGGAGAAGAGGTTTCCTATCATTAAAGGCATCACTCCCAGCCCATGGTTGACTTTTTTTACCAATCCCACACAGAAAAGGTTTGCTCCATCCCCTGATCCATCACTAAGTATCGAGTTTTATGATCAAACTCTAGAGCAACAATCAGTCCTAGGGAGCACAGAGTACCTCATGGTTCCATTGGTGCAGCAGCTGGTCATTGAGCCATTGCTCAGAGTAATGCTGAGGAAATTTCTGAAGCTTTGTTTCAATACTCTGCACCATAGCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04371 map04136 map04138 map04140 map04371
Pfam Domains
Protein Families
HEAT Pkinase WD40

Protein Analysis

276

Amino Acids

31.27

Weight (kDa)

8.79

Isoelectric Point (pI)

68.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 429
AarI CACCTGC 1 cut(s) 813
Acc36I ACCTGC 1 cut(s) 813
AccB1I GGYRCC 1 cut(s) 361
AccB7I CCANNNNNTGG 1 cut(s) 600
AccII CGCG 1 cut(s) 459
AciI CCGC 4 cut(s) 108, 344, 401, 457
AclWI GGATC 1 cut(s) 647
AcsI RAATTY 1 cut(s) 785
AcuI CTGAAG 3 cut(s) 394, 527, 812
AcyI GRCGYC 2 cut(s) 353, 383
AfaI GTAC 2 cut(s) 313, 722
AfiI CCNNNNNNNGG 2 cut(s) 484, 600
AgsI TTSAA 4 cut(s) 64, 105, 199, 805
AjnI CCWGG 3 cut(s) 302, 418, 490
AluBI AGCT 7 cut(s) 69, 173, 297, 408, 527, 748, 796
AluI AGCT 7 cut(s) 69, 173, 297, 408, 527, 748, 796
Alw21I GWGCWC 1 cut(s) 716
Alw26I GTCTC 2 cut(s) 152, 178
AlwI GGATC 1 cut(s) 647
AlwNI CAGNNNCTG 1 cut(s) 748
AoxI GGCC 1 cut(s) 137
ApeKI GCWGC 3 cut(s) 170, 742, 745
ApoI RAATTY 1 cut(s) 785
AspA2I CCTAGG 1 cut(s) 706
AspLEI GCGC 2 cut(s) 268, 477
AspS9I GGNCC 1 cut(s) 138
AsuHPI GGTGA 1 cut(s) 122
AvrII CCTAGG 1 cut(s) 706
BanI GGYRCC 1 cut(s) 361
Bbv12I GWGCWC 1 cut(s) 716
BbvCI CCTCAGC 1 cut(s) 779
BbvI GCAGC 3 cut(s) 182, 754, 757
BccI CCATC 5 cut(s) 125, 243, 379, 652, 664
BceAI ACGGC 2 cut(s) 310, 331
BciT130I CCWGG 3 cut(s) 304, 420, 492
BclI TGATCA 1 cut(s) 679
BcoDI GTCTC 2 cut(s) 152, 178
BfaI CTAG 2 cut(s) 689, 707
BfoI RGCGCY 1 cut(s) 269
BfuAI ACCTGC 1 cut(s) 813
BisI GCNGC 5 cut(s) 109, 171, 344, 743, 746
BlnI CCTAGG 1 cut(s) 706
BlsI GCNGC 5 cut(s) 110, 172, 345, 744, 747
Bme1390I CCNGG 3 cut(s) 304, 420, 492
BmgT120I GGNCC 1 cut(s) 138
BmiI GGNNCC 4 cut(s) 363, 489, 496, 732
BmrFI CCNGG 3 cut(s) 304, 420, 492
BmsI GCATC 3 cut(s) 19, 59, 594
BpmI CTGGAG 3 cut(s) 402, 506, 513
Bpu10I CCTNAGC 1 cut(s) 779
BpuEI CTTGAG 1 cut(s) 484
Bsa29I ATCGAT 1 cut(s) 120
BsaHI GRCGYC 2 cut(s) 353, 383
BsaJI CCNNGG 4 cut(s) 357, 419, 599, 706
BsaXI ACNNNNNCTCC 2 cut(s) 551, 581
Bsc4I CCNNNNNNNGG 2 cut(s) 484, 600
Bse1I ACTGG 2 cut(s) 145, 489
Bse3DI GCAATG 1 cut(s) 761
BseBI CCWGG 3 cut(s) 304, 420, 492
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 4 cut(s) 357, 419, 599, 706
BseGI GGATG 1 cut(s) 644
BseLI CCNNNNNNNGG 2 cut(s) 484, 600
BseMI GCAATG 1 cut(s) 761
BseMII CTCAG 3 cut(s) 68, 770, 781
BseNI ACTGG 2 cut(s) 145, 489
BseXI GCAGC 3 cut(s) 182, 754, 757
BseYI CCCAGC 1 cut(s) 593
BsgI GTGCAG 2 cut(s) 761, 797
Bsh1236I CGCG 1 cut(s) 459
BshFI GGCC 1 cut(s) 139
BshNI GGYRCC 1 cut(s) 361
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 1 cut(s) 716
BslI CCNNNNNNNGG 2 cut(s) 484, 600
BsmAI GTCTC 2 cut(s) 152, 178
BsmBI CGTCTC 1 cut(s) 152
BsnI GGCC 1 cut(s) 139
Bsp1286I GDGCHC 1 cut(s) 716
Bsp143I GATC 4 cut(s) 121, 175, 652, 679
Bsp19I CCATGG 1 cut(s) 599
BspACI CCGC 4 cut(s) 108, 344, 401, 457
BspANI GGCC 1 cut(s) 139
BspCNI CTCAG 3 cut(s) 67, 771, 780
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 1 cut(s) 459
BspLI GGNNCC 4 cut(s) 363, 489, 496, 732
BspMI ACCTGC 1 cut(s) 813
BspPI GGATC 1 cut(s) 647
BspQI GCTCTTC 1 cut(s) 304
BspT107I GGYRCC 1 cut(s) 361
BsrDI GCAATG 1 cut(s) 761
BsrI ACTGG 2 cut(s) 145, 489
BssECI CCNNGG 4 cut(s) 357, 419, 599, 706
BssMI GATC 4 cut(s) 121, 175, 652, 679
BssNI GRCGYC 2 cut(s) 353, 383
BssT1I CCWWGG 2 cut(s) 599, 706
Bst2UI CCWGG 3 cut(s) 304, 420, 492
Bst4CI ACNGT 1 cut(s) 276
Bst6I CTCTTC 2 cut(s) 304, 557
BstACI GRCGYC 2 cut(s) 353, 383
BstDEI CTNAG 4 cut(s) 54, 662, 767, 779
BstDSI CCRYGG 2 cut(s) 357, 599
BstF5I GGATG 1 cut(s) 644
BstFNI CGCG 1 cut(s) 459
BstH2I RGCGCY 1 cut(s) 269
BstHHI GCGC 2 cut(s) 268, 477
BstKTI GATC 4 cut(s) 124, 178, 655, 682
BstMAI GTCTC 2 cut(s) 152, 178
BstMBI GATC 4 cut(s) 121, 175, 652, 679
BstMWI GCNNNNNNNGC 2 cut(s) 322, 359
BstNI CCWGG 3 cut(s) 304, 420, 492
BstNSI RCATGY 2 cut(s) 36, 475
BstSCI CCNGG 3 cut(s) 302, 418, 490
BstUI CGCG 1 cut(s) 459
BstV1I GCAGC 3 cut(s) 182, 754, 757
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 1 cut(s) 139
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 2 cut(s) 357, 599
BtsCI GGATG 1 cut(s) 644
BveI ACCTGC 1 cut(s) 813
CaiI CAGNNNCTG 1 cut(s) 748
CfoI GCGC 2 cut(s) 268, 477
Cfr13I GGNCC 1 cut(s) 138
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 2 cut(s) 342, 372
Csp6I GTAC 2 cut(s) 312, 721
CviAII CATG 5 cut(s) 33, 209, 472, 600, 727
CviQI GTAC 2 cut(s) 312, 721
DdeI CTNAG 4 cut(s) 54, 662, 767, 779
DpnI GATC 4 cut(s) 123, 177, 654, 681
DpnII GATC 4 cut(s) 121, 175, 652, 679
Eam1104I CTCTTC 2 cut(s) 304, 557
EarI CTCTTC 2 cut(s) 304, 557
Eco130I CCWWGG 2 cut(s) 599, 706
Eco57I CTGAAG 3 cut(s) 394, 527, 812
EcoRII CCWGG 3 cut(s) 302, 418, 490
EcoT14I CCWWGG 2 cut(s) 599, 706
EcoT22I ATGCAT 1 cut(s) 34
ErhI CCWWGG 2 cut(s) 599, 706
Esp3I CGTCTC 1 cut(s) 152
FaeI CATG 5 cut(s) 36, 212, 475, 603, 730
FatI CATG 5 cut(s) 32, 208, 471, 599, 726
FbaI TGATCA 1 cut(s) 679
Fnu4HI GCNGC 5 cut(s) 109, 171, 344, 743, 746
FokI GGATG 1 cut(s) 631
Fsp4HI GCNGC 5 cut(s) 109, 171, 344, 743, 746
FspBI CTAG 2 cut(s) 689, 707
GlaI GCGC 2 cut(s) 267, 476
GluI GCNGC 5 cut(s) 109, 171, 344, 743, 746
GsaI CCCAGC 1 cut(s) 597
GsuI CTGGAG 3 cut(s) 402, 506, 513
HaeII RGCGCY 1 cut(s) 269
HaeIII GGCC 1 cut(s) 139
HgaI GACGC 2 cut(s) 342, 372
HhaI GCGC 2 cut(s) 268, 477
Hin1I GRCGYC 2 cut(s) 353, 383
Hin1II CATG 5 cut(s) 36, 212, 475, 603, 730
Hin6I GCGC 2 cut(s) 266, 475
HinP1I GCGC 2 cut(s) 266, 475
HincII GTYRAC 1 cut(s) 606
HindII GTYRAC 1 cut(s) 606
HindIII AAGCTT 3 cut(s) 67, 406, 794
HinfI GANTC 2 cut(s) 113, 415
HphI GGTGA 1 cut(s) 122
Hpy166II GTNNAC 2 cut(s) 398, 606
Hpy188I TCNGA 4 cut(s) 57, 507, 770, 792
Hpy188III TCNNGA 5 cut(s) 196, 286, 387, 412, 689
Hpy8I GTNNAC 2 cut(s) 398, 606
Hpy99I CGWCG 3 cut(s) 292, 352, 388
HpyAV CCTTC 2 cut(s) 151, 550
HpyCH4III ACNGT 1 cut(s) 276
HpyCH4V TGCA 3 cut(s) 32, 742, 814
HpyF10VI GCNNNNNNNGC 2 cut(s) 322, 359
HpyF3I CTNAG 4 cut(s) 54, 662, 767, 779
Hsp92I GRCGYC 2 cut(s) 353, 383
Hsp92II CATG 5 cut(s) 36, 212, 475, 603, 730
HspAI GCGC 2 cut(s) 266, 475
Ksp22I TGATCA 1 cut(s) 679
Kzo9I GATC 4 cut(s) 121, 175, 652, 679
LguI GCTCTTC 1 cut(s) 304
LmnI GCTCC 4 cut(s) 487, 494, 646, 711
Lsp1109I GCAGC 3 cut(s) 182, 754, 757
LweI GCATC 3 cut(s) 19, 59, 594
MaeI CTAG 2 cut(s) 689, 707
MaeIII GTNAC 2 cut(s) 337, 467
MalI GATC 4 cut(s) 123, 177, 654, 681
MboI GATC 4 cut(s) 121, 175, 652, 679
MboII GAAGA 9 cut(s) 227, 230, 233, 251, 254, 291, 402, 445, 574
MhlI GDGCHC 1 cut(s) 716
MluCI AATT 3 cut(s) 24, 424, 785
MlyI GAGTC 2 cut(s) 107, 409
MnlI CCTC 8 cut(s) 138, 205, 248, 328, 508, 558, 734, 774
Mph1103I ATGCAT 1 cut(s) 34
MseI TTAA 1 cut(s) 579
MspA1I CMGCKG 2 cut(s) 173, 748
MspR9I CCNGG 3 cut(s) 304, 420, 492
MvaI CCWGG 3 cut(s) 304, 420, 492
MvnI CGCG 1 cut(s) 459
MwoI GCNNNNNNNGC 2 cut(s) 322, 359
NcoI CCATGG 1 cut(s) 599
NdeII GATC 4 cut(s) 121, 175, 652, 679
NlaIII CATG 5 cut(s) 36, 212, 475, 603, 730
NlaIV GGNNCC 4 cut(s) 363, 489, 496, 732
NmuCI GTSAC 1 cut(s) 467
NsiI ATGCAT 1 cut(s) 34
NspI RCATGY 2 cut(s) 36, 475
PaqCI CACCTGC 1 cut(s) 813
PciSI GCTCTTC 1 cut(s) 304
PcsI WCGNNNNNNNCGW 1 cut(s) 380
PflMI CCANNNNNTGG 1 cut(s) 600
PkrI GCNGC 5 cut(s) 110, 172, 345, 744, 747
PleI GAGTC 2 cut(s) 107, 409
PpsI GAGTC 2 cut(s) 107, 409
PsiI TTATAA 1 cut(s) 429
Psp6I CCWGG 3 cut(s) 302, 418, 490
PspFI CCCAGC 1 cut(s) 593
PspGI CCWGG 3 cut(s) 302, 418, 490
PspN4I GGNNCC 4 cut(s) 363, 489, 496, 732
PspPI GGNCC 1 cut(s) 138
PstNI CAGNNNCTG 1 cut(s) 748
PvuII CAGCTG 2 cut(s) 173, 748
RsaI GTAC 2 cut(s) 313, 722
RsaNI GTAC 2 cut(s) 312, 721
SapI GCTCTTC 1 cut(s) 304
SaqAI TTAA 1 cut(s) 579
SatI GCNGC 5 cut(s) 109, 171, 344, 743, 746
Sau3AI GATC 4 cut(s) 121, 175, 652, 679
Sau96I GGNCC 1 cut(s) 138
SchI GAGTC 2 cut(s) 107, 409
ScrFI CCNGG 3 cut(s) 304, 420, 492
SduI GDGCHC 1 cut(s) 716
SfaNI GCATC 3 cut(s) 19, 59, 594
SmlI CTYRAG 1 cut(s) 499
SmoI CTYRAG 1 cut(s) 499
Sse9I AATT 3 cut(s) 24, 424, 785
SsiI CCGC 4 cut(s) 108, 344, 401, 457
SspMI CTAG 2 cut(s) 689, 707
StyD4I CCNGG 3 cut(s) 302, 418, 490
StyI CCWWGG 2 cut(s) 599, 706
TaaI ACNGT 1 cut(s) 276
TaqI TCGA 5 cut(s) 120, 308, 320, 386, 669
TasI AATT 3 cut(s) 24, 424, 785
TauI GCSGC 2 cut(s) 111, 346
Tru1I TTAA 1 cut(s) 579
Tru9I TTAA 1 cut(s) 579
TseFI GTSAC 1 cut(s) 467
TseI GCWGC 3 cut(s) 170, 742, 745
Tsp45I GTSAC 1 cut(s) 467
TspGWI ACGGA 2 cut(s) 176, 346
Van91I CCANNNNNTGG 1 cut(s) 600
XapI RAATTY 1 cut(s) 785
XbaI TCTAGA 1 cut(s) 688
XceI RCATGY 2 cut(s) 36, 475
XmaJI CCTAGG 1 cut(s) 706
XspI CTAG 2 cut(s) 689, 707
Zsp2I ATGCAT 1 cut(s) 34
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.