exocyst complex component
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000023029 |
| rosa_multiflora | Rmu_sc0002927.1_g000029 Rmu_sc0007339.1_g000003 Rmu_sc0009890.1_g000001 Rmu_sc0027862.1_g000001 Rmu_ssc0000155.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00058330 |
| rosa_rugosa | Rorug05G0246100 |
| rosa_samantha | Rh1AG088400 Rh3DG266000 Rh5CG151200 Rh5CG155200 Rh7CG392900 Rh7DG427800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 63 |
| AjnI | CCWGG | 1 cut(s) | 19 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| Alw26I | GTCTC | 2 cut(s) | 31, 38 |
| AspLEI | GCGC | 1 cut(s) | 6 |
| BccI | CCATC | 1 cut(s) | 182 |
| BciT130I | CCWGG | 1 cut(s) | 21 |
| BcoDI | GTCTC | 2 cut(s) | 31, 38 |
| Bme1390I | CCNGG | 1 cut(s) | 21 |
| BmiI | GGNNCC | 1 cut(s) | 18 |
| BmrFI | CCNGG | 1 cut(s) | 21 |
| BmrI | ACTGGG | 1 cut(s) | 118 |
| BmsI | GCATC | 1 cut(s) | 123 |
| BmuI | ACTGGG | 1 cut(s) | 118 |
| BpmI | CTGGAG | 2 cut(s) | 35, 42 |
| BpuEI | CTTGAG | 2 cut(s) | 13, 20 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 80, 110 |
| Bse1I | ACTGG | 2 cut(s) | 18, 124 |
| BseBI | CCWGG | 1 cut(s) | 21 |
| BseGI | GGATG | 1 cut(s) | 174 |
| BseMII | CTCAG | 1 cut(s) | 21 |
| BseNI | ACTGG | 2 cut(s) | 18, 124 |
| BsmAI | GTCTC | 2 cut(s) | 31, 38 |
| BspCNI | CTCAG | 1 cut(s) | 20 |
| BspLI | GGNNCC | 1 cut(s) | 18 |
| BsrI | ACTGG | 2 cut(s) | 18, 124 |
| Bst2UI | CCWGG | 1 cut(s) | 21 |
| Bst6I | CTCTTC | 2 cut(s) | 39, 86 |
| BstDEI | CTNAG | 1 cut(s) | 7 |
| BstF5I | GGATG | 1 cut(s) | 174 |
| BstHHI | GCGC | 1 cut(s) | 6 |
| BstMAI | GTCTC | 2 cut(s) | 31, 38 |
| BstNI | CCWGG | 1 cut(s) | 21 |
| BstSCI | CCNGG | 1 cut(s) | 19 |
| BtsCI | GGATG | 1 cut(s) | 174 |
| BtsIMutI | CAGTG | 1 cut(s) | 156 |
| CfoI | GCGC | 1 cut(s) | 6 |
| CviJI | RGCY | 2 cut(s) | 19, 56 |
| CviKI_1 | RGCY | 2 cut(s) | 19, 56 |
| DdeI | CTNAG | 1 cut(s) | 7 |
| Eam1104I | CTCTTC | 2 cut(s) | 39, 86 |
| EarI | CTCTTC | 2 cut(s) | 39, 86 |
| Eco57I | CTGAAG | 1 cut(s) | 63 |
| EcoRII | CCWGG | 1 cut(s) | 19 |
| FokI | GGATG | 1 cut(s) | 161 |
| GlaI | GCGC | 1 cut(s) | 5 |
| GsuI | CTGGAG | 2 cut(s) | 35, 42 |
| HhaI | GCGC | 1 cut(s) | 6 |
| Hin6I | GCGC | 1 cut(s) | 4 |
| HinP1I | GCGC | 1 cut(s) | 4 |
| HincII | GTYRAC | 1 cut(s) | 136 |
| HindII | GTYRAC | 1 cut(s) | 136 |
| HinfI | GANTC | 2 cut(s) | 24, 137 |
| Hpy166II | GTNNAC | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 2 cut(s) | 10, 43 |
| Hpy8I | GTNNAC | 1 cut(s) | 136 |
| HpyAV | CCTTC | 1 cut(s) | 79 |
| HpyF3I | CTNAG | 1 cut(s) | 7 |
| HspAI | GCGC | 1 cut(s) | 4 |
| LmnI | GCTCC | 2 cut(s) | 16, 176 |
| LpnPI | CCDG | 3 cut(s) | 6, 33, 137 |
| LweI | GCATC | 1 cut(s) | 123 |
| MboII | GAAGA | 2 cut(s) | 56, 103 |
| MlyI | GAGTC | 2 cut(s) | 33, 131 |
| MnlI | CCTC | 1 cut(s) | 87 |
| MseI | TTAA | 1 cut(s) | 108 |
| MspR9I | CCNGG | 1 cut(s) | 21 |
| MvaI | CCWGG | 1 cut(s) | 21 |
| NlaIV | GGNNCC | 1 cut(s) | 18 |
| PleI | GAGTC | 2 cut(s) | 32, 131 |
| PpsI | GAGTC | 2 cut(s) | 32, 131 |
| Psp6I | CCWGG | 1 cut(s) | 19 |
| PspGI | CCWGG | 1 cut(s) | 19 |
| PspN4I | GGNNCC | 1 cut(s) | 18 |
| SaqAI | TTAA | 1 cut(s) | 108 |
| SchI | GAGTC | 2 cut(s) | 33, 131 |
| ScrFI | CCNGG | 1 cut(s) | 21 |
| SetI | ASST | 3 cut(s) | 58, 98, 168 |
| SfaNI | GCATC | 1 cut(s) | 123 |
| SgeI | CNNG | 6 cut(s) | 26, 32, 33, 42, 49, 136 |
| SmlI | CTYRAG | 2 cut(s) | 28, 35 |
| SmoI | CTYRAG | 2 cut(s) | 28, 35 |
| StyD4I | CCNGG | 1 cut(s) | 19 |
| Tru1I | TTAA | 1 cut(s) | 108 |
| Tru9I | TTAA | 1 cut(s) | 108 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TspRI | CASTG | 1 cut(s) | 163 |