No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000023029 |
| rosa_multiflora | Rmu_sc0002927.1_g000029 Rmu_sc0007339.1_g000003 Rmu_sc0009890.1_g000001 Rmu_sc0027862.1_g000001 Rmu_ssc0000155.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00058330 |
| rosa_rugosa | Rorug05G0246100 |
| rosa_samantha | Rh1AG088400 Rh3DG266000 Rh5CG151200 Rh5CG155200 Rh7CG392900 Rh7DG427800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 2 cut(s) | 56, 63 |
| AjnI | CCWGG | 1 cut(s) | 19 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| AoxI | GGCC | 1 cut(s) | 230 |
| BciT130I | CCWGG | 1 cut(s) | 21 |
| Bme1390I | CCNGG | 1 cut(s) | 21 |
| BmiI | GGNNCC | 2 cut(s) | 18, 25 |
| BmrFI | CCNGG | 1 cut(s) | 21 |
| BmrI | ACTGGG | 1 cut(s) | 118 |
| BmsI | GCATC | 2 cut(s) | 123, 216 |
| BmuI | ACTGGG | 1 cut(s) | 118 |
| BpmI | CTGGAG | 2 cut(s) | 35, 42 |
| BpuEI | CTTGAG | 1 cut(s) | 13 |
| BsaJI | CCNNGG | 1 cut(s) | 202 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 80, 110 |
| Bse1I | ACTGG | 2 cut(s) | 18, 124 |
| BseBI | CCWGG | 1 cut(s) | 21 |
| BseDI | CCNNGG | 1 cut(s) | 202 |
| BseGI | GGATG | 1 cut(s) | 207 |
| BseMII | CTCAG | 1 cut(s) | 21 |
| BseNI | ACTGG | 2 cut(s) | 18, 124 |
| BshFI | GGCC | 1 cut(s) | 232 |
| BsnI | GGCC | 1 cut(s) | 232 |
| BspANI | GGCC | 1 cut(s) | 232 |
| BspCNI | CTCAG | 1 cut(s) | 20 |
| BspLI | GGNNCC | 2 cut(s) | 18, 25 |
| BsrI | ACTGG | 2 cut(s) | 18, 124 |
| BssECI | CCNNGG | 1 cut(s) | 202 |
| BssT1I | CCWWGG | 1 cut(s) | 202 |
| Bst2UI | CCWGG | 1 cut(s) | 21 |
| Bst4CI | ACNGT | 1 cut(s) | 199 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstDEI | CTNAG | 2 cut(s) | 7, 234 |
| BstF5I | GGATG | 1 cut(s) | 207 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 191 |
| BstNI | CCWGG | 1 cut(s) | 21 |
| BstSCI | CCNGG | 1 cut(s) | 19 |
| BsuRI | GGCC | 1 cut(s) | 232 |
| BtsCI | GGATG | 1 cut(s) | 207 |
| CviAII | CATG | 1 cut(s) | 243 |
| CviJI | RGCY | 5 cut(s) | 19, 26, 40, 56, 232 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 26, 40, 56, 232 |
| DdeI | CTNAG | 2 cut(s) | 7, 234 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco130I | CCWWGG | 1 cut(s) | 202 |
| Eco147I | AGGCCT | 1 cut(s) | 232 |
| Eco57I | CTGAAG | 2 cut(s) | 56, 63 |
| EcoRII | CCWGG | 1 cut(s) | 19 |
| EcoT14I | CCWWGG | 1 cut(s) | 202 |
| ErhI | CCWWGG | 1 cut(s) | 202 |
| FaeI | CATG | 1 cut(s) | 246 |
| FaiI | YATR | 2 cut(s) | 171, 244 |
| FatI | CATG | 1 cut(s) | 242 |
| FokI | GGATG | 1 cut(s) | 194 |
| GsuI | CTGGAG | 2 cut(s) | 35, 42 |
| HaeIII | GGCC | 1 cut(s) | 232 |
| Hin1II | CATG | 1 cut(s) | 246 |
| HincII | GTYRAC | 2 cut(s) | 136, 178 |
| HindII | GTYRAC | 2 cut(s) | 136, 178 |
| HinfI | GANTC | 3 cut(s) | 137, 225, 238 |
| Hpy166II | GTNNAC | 3 cut(s) | 136, 145, 178 |
| Hpy188I | TCNGA | 2 cut(s) | 10, 36 |
| Hpy8I | GTNNAC | 3 cut(s) | 136, 145, 178 |
| HpyAV | CCTTC | 1 cut(s) | 79 |
| HpyCH4III | ACNGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 191 |
| HpyF3I | CTNAG | 2 cut(s) | 7, 234 |
| Hsp92II | CATG | 1 cut(s) | 246 |
| LmnI | GCTCC | 2 cut(s) | 16, 23 |
| LpnPI | CCDG | 5 cut(s) | 6, 33, 54, 137, 214 |
| LweI | GCATC | 2 cut(s) | 123, 216 |
| MboII | GAAGA | 1 cut(s) | 56 |
| MlyI | GAGTC | 1 cut(s) | 131 |
| MnlI | CCTC | 1 cut(s) | 37 |
| MseI | TTAA | 1 cut(s) | 108 |
| MspR9I | CCNGG | 1 cut(s) | 21 |
| MvaI | CCWGG | 1 cut(s) | 21 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 191 |
| NlaIII | CATG | 1 cut(s) | 246 |
| NlaIV | GGNNCC | 2 cut(s) | 18, 25 |
| PceI | AGGCCT | 1 cut(s) | 232 |
| PfeI | GAWTC | 2 cut(s) | 225, 238 |
| PleI | GAGTC | 1 cut(s) | 131 |
| PpsI | GAGTC | 1 cut(s) | 131 |
| Psp6I | CCWGG | 1 cut(s) | 19 |
| PspGI | CCWGG | 1 cut(s) | 19 |
| PspN4I | GGNNCC | 2 cut(s) | 18, 25 |
| SaqAI | TTAA | 1 cut(s) | 108 |
| SchI | GAGTC | 1 cut(s) | 131 |
| ScrFI | CCNGG | 1 cut(s) | 21 |
| SetI | ASST | 2 cut(s) | 58, 98 |
| SfaNI | GCATC | 2 cut(s) | 123, 216 |
| SgeI | CNNG | 9 cut(s) | 26, 32, 33, 42, 53, 136, 215, 224, 241 |
| SmlI | CTYRAG | 1 cut(s) | 28 |
| SmoI | CTYRAG | 1 cut(s) | 28 |
| SseBI | AGGCCT | 1 cut(s) | 232 |
| StuI | AGGCCT | 1 cut(s) | 232 |
| StyD4I | CCNGG | 1 cut(s) | 19 |
| StyI | CCWWGG | 1 cut(s) | 202 |
| TaaI | ACNGT | 1 cut(s) | 199 |
| TfiI | GAWTC | 2 cut(s) | 225, 238 |
| Tru1I | TTAA | 1 cut(s) | 108 |
| Tru9I | TTAA | 1 cut(s) | 108 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 218 |