ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000023029 |
| rosa_multiflora | Rmu_sc0002927.1_g000029 Rmu_sc0007339.1_g000003 Rmu_sc0009890.1_g000001 Rmu_sc0027862.1_g000001 Rmu_ssc0000155.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00058330 |
| rosa_rugosa | Rorug05G0246100 |
| rosa_samantha | Rh1AG088400 Rh3DG266000 Rh5CG151200 Rh5CG155200 Rh7CG392900 Rh7DG427800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 48 |
| AciI | CCGC | 1 cut(s) | 76 |
| AclWI | GGATC | 1 cut(s) | 266 |
| AcuI | CTGAAG | 2 cut(s) | 146, 153 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 38 |
| AgsI | TTSAA | 1 cut(s) | 337 |
| AlwI | GGATC | 1 cut(s) | 266 |
| AspA2I | CCTAGG | 1 cut(s) | 325 |
| AspLEI | GCGC | 1 cut(s) | 96 |
| AvrII | CCTAGG | 1 cut(s) | 325 |
| BccI | CCATC | 2 cut(s) | 271, 283 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 239, 273 |
| BclI | TGATCA | 1 cut(s) | 298 |
| BfaI | CTAG | 2 cut(s) | 111, 326 |
| BlnI | CCTAGG | 1 cut(s) | 325 |
| BmiI | GGNNCC | 1 cut(s) | 108 |
| BmrI | ACTGGG | 1 cut(s) | 208 |
| BmsI | GCATC | 1 cut(s) | 213 |
| BmuI | ACTGGG | 1 cut(s) | 208 |
| BpmI | CTGGAG | 2 cut(s) | 125, 291 |
| BpuEI | CTTGAG | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 1 cut(s) | 325 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 170, 200 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 38 |
| Bse1I | ACTGG | 2 cut(s) | 108, 214 |
| BseDI | CCNNGG | 1 cut(s) | 325 |
| BseGI | GGATG | 1 cut(s) | 263 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BseMII | CTCAG | 1 cut(s) | 111 |
| BseNI | ACTGG | 2 cut(s) | 108, 214 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 38 |
| Bsp143I | GATC | 2 cut(s) | 271, 298 |
| BspACI | CCGC | 1 cut(s) | 76 |
| BspCNI | CTCAG | 1 cut(s) | 110 |
| BspLI | GGNNCC | 1 cut(s) | 108 |
| BspPI | GGATC | 1 cut(s) | 266 |
| BsrI | ACTGG | 2 cut(s) | 108, 214 |
| BssECI | CCNNGG | 1 cut(s) | 325 |
| BssMI | GATC | 2 cut(s) | 271, 298 |
| BssT1I | CCWWGG | 1 cut(s) | 325 |
| Bst6I | CTCTTC | 1 cut(s) | 129 |
| BstDEI | CTNAG | 2 cut(s) | 97, 281 |
| BstF5I | GGATG | 1 cut(s) | 263 |
| BstHHI | GCGC | 1 cut(s) | 96 |
| BstKTI | GATC | 2 cut(s) | 274, 301 |
| BstMBI | GATC | 2 cut(s) | 271, 298 |
| BstNSI | RCATGY | 1 cut(s) | 94 |
| BtsCI | GGATG | 1 cut(s) | 263 |
| CfoI | GCGC | 1 cut(s) | 96 |
| CviAII | CATG | 2 cut(s) | 38, 91 |
| CviJI | RGCY | 4 cut(s) | 109, 116, 130, 146 |
| CviKI_1 | RGCY | 4 cut(s) | 109, 116, 130, 146 |
| DdeI | CTNAG | 2 cut(s) | 97, 281 |
| DpnI | GATC | 2 cut(s) | 273, 300 |
| DpnII | GATC | 2 cut(s) | 271, 298 |
| Eam1104I | CTCTTC | 1 cut(s) | 129 |
| EarI | CTCTTC | 1 cut(s) | 129 |
| Eco130I | CCWWGG | 1 cut(s) | 325 |
| Eco57I | CTGAAG | 2 cut(s) | 146, 153 |
| EcoT14I | CCWWGG | 1 cut(s) | 325 |
| ErhI | CCWWGG | 1 cut(s) | 325 |
| FaeI | CATG | 2 cut(s) | 41, 94 |
| FatI | CATG | 2 cut(s) | 37, 90 |
| FbaI | TGATCA | 1 cut(s) | 298 |
| FokI | GGATG | 1 cut(s) | 250 |
| FspBI | CTAG | 2 cut(s) | 111, 326 |
| GlaI | GCGC | 1 cut(s) | 95 |
| GsuI | CTGGAG | 2 cut(s) | 125, 291 |
| HhaI | GCGC | 1 cut(s) | 96 |
| Hin1II | CATG | 2 cut(s) | 41, 94 |
| Hin6I | GCGC | 1 cut(s) | 94 |
| HinP1I | GCGC | 1 cut(s) | 94 |
| HincII | GTYRAC | 1 cut(s) | 226 |
| HindII | GTYRAC | 1 cut(s) | 226 |
| HinfI | GANTC | 1 cut(s) | 227 |
| Hpy166II | GTNNAC | 1 cut(s) | 226 |
| Hpy188I | TCNGA | 2 cut(s) | 100, 126 |
| Hpy188III | TCNNGA | 1 cut(s) | 308 |
| Hpy8I | GTNNAC | 1 cut(s) | 226 |
| HpyAV | CCTTC | 2 cut(s) | 42, 169 |
| HpyF3I | CTNAG | 2 cut(s) | 97, 281 |
| Hsp92II | CATG | 2 cut(s) | 41, 94 |
| HspAI | GCGC | 1 cut(s) | 94 |
| Ksp22I | TGATCA | 1 cut(s) | 298 |
| Kzo9I | GATC | 2 cut(s) | 271, 298 |
| LmnI | GCTCC | 2 cut(s) | 106, 265 |
| LpnPI | CCDG | 6 cut(s) | 89, 144, 227, 282, 321, 329 |
| LweI | GCATC | 1 cut(s) | 213 |
| MaeI | CTAG | 2 cut(s) | 111, 326 |
| MalI | GATC | 2 cut(s) | 273, 300 |
| MboI | GATC | 2 cut(s) | 271, 298 |
| MboII | GAAGA | 2 cut(s) | 64, 146 |
| MluCI | AATT | 3 cut(s) | 43, 331, 349 |
| MlyI | GAGTC | 1 cut(s) | 221 |
| MnlI | CCTC | 1 cut(s) | 127 |
| MseI | TTAA | 1 cut(s) | 198 |
| NdeII | GATC | 2 cut(s) | 271, 298 |
| NlaIII | CATG | 2 cut(s) | 41, 94 |
| NlaIV | GGNNCC | 1 cut(s) | 108 |
| NspI | RCATGY | 1 cut(s) | 94 |
| PleI | GAGTC | 1 cut(s) | 221 |
| PpsI | GAGTC | 1 cut(s) | 221 |
| PsiI | TTATAA | 1 cut(s) | 48 |
| PspN4I | GGNNCC | 1 cut(s) | 108 |
| SaqAI | TTAA | 1 cut(s) | 198 |
| Sau3AI | GATC | 2 cut(s) | 271, 298 |
| SchI | GAGTC | 1 cut(s) | 221 |
| SetI | ASST | 2 cut(s) | 54, 331 |
| SfaNI | GCATC | 1 cut(s) | 213 |
| SmlI | CTYRAG | 1 cut(s) | 118 |
| SmoI | CTYRAG | 1 cut(s) | 118 |
| Sse9I | AATT | 3 cut(s) | 43, 331, 349 |
| SsiI | CCGC | 1 cut(s) | 76 |
| SspMI | CTAG | 2 cut(s) | 111, 326 |
| StyI | CCWWGG | 1 cut(s) | 325 |
| TaqI | TCGA | 1 cut(s) | 288 |
| TasI | AATT | 3 cut(s) | 43, 331, 349 |
| Tru1I | TTAA | 1 cut(s) | 198 |
| Tru9I | TTAA | 1 cut(s) | 198 |
| XceI | RCATGY | 1 cut(s) | 94 |
| XmaJI | CCTAGG | 1 cut(s) | 325 |
| XspI | CTAG | 2 cut(s) | 111, 326 |