f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53000 |
| fragaria_vesca | FvH4_6g17460 |
| malus_domestica | MD12G1096700.v1.1 MD14G1094500.v1.1 |
| prunus_persica | Prupe.7G121000_v2.0.a1 |
| pyrus_communis | pycom14g09240 |
| rosa_chinensis | RchiOBHm_Chr1g0333681 RchiOBHm_Chr3g0471701 RchiOBHm_Chr6g0303251 |
| rosa_laevigata | RLG00000023407 RLG00000024141 RLG00000029691 |
| rosa_multiflora | Rmu_sc0001306.1_g000035 Rmu_sc0003693.1_g000014 Rmu_sc0004688.1_g000014 Rmu_sc0005631.1_g000019 |
| rosa_roxburghii | Rroxscaffold_6G00409640 |
| rosa_rugosa | Rorug03G0118900 |
| rosa_samantha | Rh2BG284700 Rh3AG170300 Rh3BG196000 Rh3CG186700 Rh3CG195000 Rh3DG178900 Rh6AG434100 Rh7BG392500 |
| rosa_wichuraiana | Rw0G009020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 141 |
| AccB1I | GGYRCC | 1 cut(s) | 141 |
| AccI | GTMKAC | 1 cut(s) | 285 |
| AccII | CGCG | 1 cut(s) | 62 |
| AciI | CCGC | 3 cut(s) | 14, 57, 184 |
| AfaI | GTAC | 2 cut(s) | 5, 143 |
| AgeI | ACCGGT | 1 cut(s) | 420 |
| AjnI | CCWGG | 1 cut(s) | 267 |
| AluBI | AGCT | 3 cut(s) | 40, 94, 388 |
| AluI | AGCT | 3 cut(s) | 40, 94, 388 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 151 |
| Ama87I | CYCGRG | 1 cut(s) | 134 |
| ApeKI | GCWGC | 3 cut(s) | 94, 215, 408 |
| AsiGI | ACCGGT | 1 cut(s) | 420 |
| Asp718I | GGTACC | 1 cut(s) | 141 |
| AspLEI | GCGC | 1 cut(s) | 62 |
| AsuHPI | GGTGA | 1 cut(s) | 317 |
| AvaI | CYCGRG | 1 cut(s) | 134 |
| BanI | GGYRCC | 1 cut(s) | 141 |
| BbvI | GCAGC | 3 cut(s) | 81, 202, 420 |
| BccI | CCATC | 1 cut(s) | 197 |
| BceAI | ACGGC | 3 cut(s) | 203, 266, 350 |
| BciT130I | CCWGG | 1 cut(s) | 269 |
| BfaI | CTAG | 2 cut(s) | 32, 242 |
| BisI | GCNGC | 4 cut(s) | 58, 95, 216, 409 |
| BlsI | GCNGC | 4 cut(s) | 59, 96, 217, 410 |
| Bme1390I | CCNGG | 1 cut(s) | 269 |
| BmeT110I | CYCGRG | 1 cut(s) | 134 |
| BmiI | GGNNCC | 3 cut(s) | 143, 307, 419 |
| BmrFI | CCNGG | 1 cut(s) | 269 |
| BmrI | ACTGGG | 1 cut(s) | 55 |
| BmsI | GCATC | 4 cut(s) | 64, 285, 300, 352 |
| BmuI | ACTGGG | 1 cut(s) | 55 |
| BsaJI | CCNNGG | 1 cut(s) | 219 |
| BsaWI | WCCGGW | 2 cut(s) | 302, 420 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 332, 362 |
| Bse118I | RCCGGY | 1 cut(s) | 420 |
| Bse1I | ACTGG | 1 cut(s) | 50 |
| BseBI | CCWGG | 1 cut(s) | 269 |
| BseDI | CCNNGG | 1 cut(s) | 219 |
| BseNI | ACTGG | 1 cut(s) | 50 |
| BseRI | GAGGAG | 1 cut(s) | 305 |
| BseXI | GCAGC | 3 cut(s) | 81, 202, 420 |
| Bsh1236I | CGCG | 1 cut(s) | 62 |
| BshNI | GGYRCC | 1 cut(s) | 141 |
| BshTI | ACCGGT | 1 cut(s) | 420 |
| BsiHKCI | CYCGRG | 1 cut(s) | 134 |
| BsiSI | CCGG | 3 cut(s) | 17, 303, 421 |
| BsoBI | CYCGRG | 1 cut(s) | 134 |
| Bsp143I | GATC | 1 cut(s) | 112 |
| BspACI | CCGC | 3 cut(s) | 14, 57, 184 |
| BspFNI | CGCG | 1 cut(s) | 62 |
| BspLI | GGNNCC | 3 cut(s) | 143, 307, 419 |
| BspT107I | GGYRCC | 1 cut(s) | 141 |
| BsrFI | RCCGGY | 1 cut(s) | 420 |
| BsrI | ACTGG | 1 cut(s) | 50 |
| BssAI | RCCGGY | 1 cut(s) | 420 |
| BssECI | CCNNGG | 1 cut(s) | 219 |
| BssMI | GATC | 1 cut(s) | 112 |
| Bst2UI | CCWGG | 1 cut(s) | 269 |
| Bst4CI | ACNGT | 1 cut(s) | 262 |
| Bst6I | CTCTTC | 1 cut(s) | 350 |
| BstDSI | CCRYGG | 1 cut(s) | 219 |
| BstFNI | CGCG | 1 cut(s) | 62 |
| BstHHI | GCGC | 1 cut(s) | 62 |
| BstKTI | GATC | 1 cut(s) | 115 |
| BstMBI | GATC | 1 cut(s) | 112 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 124 |
| BstNI | CCWGG | 1 cut(s) | 269 |
| BstSCI | CCNGG | 1 cut(s) | 267 |
| BstUI | CGCG | 1 cut(s) | 62 |
| BstV1I | GCAGC | 3 cut(s) | 81, 202, 420 |
| BtgI | CCRYGG | 1 cut(s) | 219 |
| BtgZI | GCGATG | 2 cut(s) | 262, 277 |
| CaiI | CAGNNNCTG | 1 cut(s) | 151 |
| CfoI | GCGC | 1 cut(s) | 62 |
| Cfr10I | RCCGGY | 1 cut(s) | 420 |
| CseI | GACGC | 1 cut(s) | 51 |
| Csp6I | GTAC | 2 cut(s) | 4, 142 |
| CspAI | ACCGGT | 1 cut(s) | 420 |
| CviAII | CATG | 1 cut(s) | 110 |
| CviJI | RGCY | 5 cut(s) | 35, 40, 94, 215, 388 |
| CviKI_1 | RGCY | 5 cut(s) | 35, 40, 94, 215, 388 |
| CviQI | GTAC | 2 cut(s) | 4, 142 |
| DpnI | GATC | 1 cut(s) | 114 |
| DpnII | GATC | 1 cut(s) | 112 |
| Eam1104I | CTCTTC | 1 cut(s) | 350 |
| EarI | CTCTTC | 1 cut(s) | 350 |
| Eco88I | CYCGRG | 1 cut(s) | 134 |
| EcoRII | CCWGG | 1 cut(s) | 267 |
| FaeI | CATG | 1 cut(s) | 113 |
| FaiI | YATR | 1 cut(s) | 111 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 152, 184 |
| FatI | CATG | 1 cut(s) | 109 |
| FauI | CCCGC | 1 cut(s) | 191 |
| FblI | GTMKAC | 1 cut(s) | 285 |
| Fnu4HI | GCNGC | 4 cut(s) | 58, 95, 216, 409 |
| Fsp4HI | GCNGC | 4 cut(s) | 58, 95, 216, 409 |
| FspBI | CTAG | 2 cut(s) | 32, 242 |
| GlaI | GCGC | 1 cut(s) | 61 |
| GluI | GCNGC | 4 cut(s) | 58, 95, 216, 409 |
| HapII | CCGG | 3 cut(s) | 17, 303, 421 |
| HgaI | GACGC | 1 cut(s) | 51 |
| HhaI | GCGC | 1 cut(s) | 62 |
| Hin1II | CATG | 1 cut(s) | 113 |
| Hin6I | GCGC | 1 cut(s) | 60 |
| HinP1I | GCGC | 1 cut(s) | 60 |
| HinfI | GANTC | 4 cut(s) | 10, 86, 299, 382 |
| HpaII | CCGG | 3 cut(s) | 17, 303, 421 |
| HphI | GGTGA | 1 cut(s) | 317 |
| Hpy166II | GTNNAC | 2 cut(s) | 265, 286 |
| Hpy188I | TCNGA | 1 cut(s) | 73 |
| Hpy188III | TCNNGA | 1 cut(s) | 134 |
| Hpy8I | GTNNAC | 2 cut(s) | 265, 286 |
| Hpy99I | CGWCG | 1 cut(s) | 239 |
| HpyAV | CCTTC | 1 cut(s) | 154 |
| HpyCH4III | ACNGT | 1 cut(s) | 262 |
| HpyCH4V | TGCA | 5 cut(s) | 27, 77, 276, 291, 357 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 124 |
| Hsp92II | CATG | 1 cut(s) | 113 |
| HspAI | GCGC | 1 cut(s) | 60 |
| KpnI | GGTACC | 1 cut(s) | 145 |
| Kzo9I | GATC | 1 cut(s) | 112 |
| Lsp1109I | GCAGC | 3 cut(s) | 81, 202, 420 |
| LweI | GCATC | 4 cut(s) | 64, 285, 300, 352 |
| MaeI | CTAG | 2 cut(s) | 32, 242 |
| MalI | GATC | 1 cut(s) | 114 |
| MboI | GATC | 1 cut(s) | 112 |
| MboII | GAAGA | 2 cut(s) | 169, 337 |
| MfeI | CAATTG | 1 cut(s) | 412 |
| MluCI | AATT | 2 cut(s) | 103, 412 |
| MlyI | GAGTC | 1 cut(s) | 4 |
| MnlI | CCTC | 8 cut(s) | 132, 141, 323, 326, 353, 362, 383, 406 |
| MspI | CCGG | 3 cut(s) | 17, 303, 421 |
| MspR9I | CCNGG | 1 cut(s) | 269 |
| MunI | CAATTG | 1 cut(s) | 412 |
| MvaI | CCWGG | 1 cut(s) | 269 |
| MvnI | CGCG | 1 cut(s) | 62 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 124 |
| NdeII | GATC | 1 cut(s) | 112 |
| NlaIII | CATG | 1 cut(s) | 113 |
| NlaIV | GGNNCC | 3 cut(s) | 143, 307, 419 |
| PfeI | GAWTC | 3 cut(s) | 86, 299, 382 |
| PinAI | ACCGGT | 1 cut(s) | 420 |
| PkrI | GCNGC | 4 cut(s) | 59, 96, 217, 410 |
| PleI | GAGTC | 1 cut(s) | 4 |
| PpsI | GAGTC | 1 cut(s) | 4 |
| Psp6I | CCWGG | 1 cut(s) | 267 |
| PspGI | CCWGG | 1 cut(s) | 267 |
| PspN4I | GGNNCC | 3 cut(s) | 143, 307, 419 |
| PstNI | CAGNNNCTG | 1 cut(s) | 151 |
| RsaI | GTAC | 2 cut(s) | 5, 143 |
| RsaNI | GTAC | 2 cut(s) | 4, 142 |
| SatI | GCNGC | 4 cut(s) | 58, 95, 216, 409 |
| Sau3AI | GATC | 1 cut(s) | 112 |
| SchI | GAGTC | 1 cut(s) | 4 |
| ScrFI | CCNGG | 1 cut(s) | 269 |
| SfaNI | GCATC | 4 cut(s) | 64, 285, 300, 352 |
| Sse9I | AATT | 2 cut(s) | 103, 412 |
| SsiI | CCGC | 3 cut(s) | 14, 57, 184 |
| SspMI | CTAG | 2 cut(s) | 32, 242 |
| StyD4I | CCNGG | 1 cut(s) | 267 |
| TaaI | ACNGT | 1 cut(s) | 262 |
| TaqI | TCGA | 2 cut(s) | 155, 226 |
| TasI | AATT | 2 cut(s) | 103, 412 |
| TauI | GCSGC | 1 cut(s) | 60 |
| TfiI | GAWTC | 3 cut(s) | 86, 299, 382 |
| TseI | GCWGC | 3 cut(s) | 94, 215, 408 |
| TspGWI | ACGGA | 1 cut(s) | 298 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 265 |
| XmiI | GTMKAC | 1 cut(s) | 285 |
| XspI | CTAG | 2 cut(s) | 32, 242 |