Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0009676

Physical Location & Seq

Genomic Coordinates Forward (+)

38734419 .. 38737142

Gene Structure 2724 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024748

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGATGCGGCTGGAGACGGATTGTCTTCCGATACATATTGAGTCTGATGATGGCGGTGATGAGGTTGCAAATAAAATTGAGATGGCAAAAAGTTTTACCGATGATGAAATTGAAGGTTTACGGAAGGTCAATACTCATGAAATGCTACACCACAGAAAACTCCACCTGGTACTTAATCTAGAACGCACCCTGCTAGATCACGCGCTACTCAGTGATCTGACCCCTGAAGAAGAAGAATATGTAAAGACTTTAACGATGGATCATCCTCTGCCTTTGCAAGATGTTCTCAAAGTGCAACATTGTCCCAAAATGAAGCCTATAATTGTCAAGCTTAGGCCCTTTGCGAGAGCCTTTCTGAAGGAAGCCAGCGACATGTTTGAAATTTATGCATGCTCAAATGTTTCTCGATATCTTGTGTGGAAAATGGTTGAGCTACTCGATCCTACAAATGAGTACTTTGGTCGTAGAGTGATATCGCGTGAGGATTTCGTTAGCACCTTTTCAGGAAAGAAGTGTCTTGATCTTGTGCTTGCCCAAGAGTCTACTGTTCTGATCCTTGATCATAAGCAAGAGACATGGACGGAGCAAAATCAAAAAAATATAGTCCTAACGCAAAAGTATCAGTTCTTTAAAGGAAGGAGTGAACAGAACAGTGAGTTCAAGTCCCATTGTGAGTTGAAAACTGATGAGGGGGCGTATCTTGCAGTGATCCTTCAACATCTTAAGCTAATTCACAGCAGCTTCTTTGATGATCAAGTGATGTGTGACAACCTTATTGAAAGAGATGTGAGGAAGGTGTTGAAAAATCTTCGGCAACAGAAGCTGGCAGAGCAGTTGGGAACTACTTGTGATGAACAAATGGATCTATCGACCACACAGGTGGCTGGGGCTCACGTTGGACTACCTGCTCGTTCATTGCAAATGGATTTTCCTGCTCGCTCACAGGAGGTTGCAAGTAATTATGAGATGGCAAAAAGGCGCAACTTAACGATTGATCATGGGGGAACAACAAGCAGCACAGATCATCAGGAGATCGGGGTTGTTTCTGCTTCTTCTTTGTGTGATTATTGTGCCAACTTTGCTGACAGATACGGTTTTCTACACGAGGGGCTCTTAACCACCCTAAGTGATGAACACATTTACCGTTTGCGCAAGCACAACACACAGAAAATGCTAGTCCACAAAAAACTCCACCTGGTAATTAATCTGGATCACACCTTTCTGAGTCACACAAGGCTCAGTGATCTGACCCCAGAAGAAGCAGAAAATATAAAGGTCCAAGAAGATTCCCAAGATATTTTCACAGTGCGAGTTCCTCCAAAAATGAGACCTATTATTATCAAGTTCAGGCCCTTTCTGAGAACCTTTCTGAAGGAAGCCTGTGACTTTTTCGAAATTTATGCATATGCAAATGCTCCTCGATCTCTTGTGTGGAAAATTGTTGAGCTGCTCGATCCTAGAAATGAATACTTCGGTCGTAGAGTGATATCGCCTGAGAACTTTTGTAGCACCCACCGAGGAAAGAAGTCTCTTGATCTTGTGCTTGGTCAAAAGTCTGCTGTTTTGGTGGTTGATGATGAAGAAGACGGATGGCAGGAGAAAAGTCGAAATAATGTAATGCTACTGGGACAGTATTGTTTCTTCAAAAAGACGAGTGGCAAGAAGAGAAAACGGAAGTCCCTTTGTGAGTTGAAATCTGATGAACGGACTGCTTCTCTTGCATCTCTTCTTAAACAGCTTAAGCAAATACACAACAGGTTCTTTAATGATGAAATAATGTGTGACAACCTTTTCGACAGAGATGTGAGGGTGCTGTTAAAAATTGAGTGGGACTCTAATAATGACGATAGCCTTCAGTTTTGGAGGAAGGCAGTATCAAATTGTATGCGAAAAAAATTTGTGGCGTCCCTTAATTGTCAACAGAAGAATCTGGCGGAGCAGTCATCCAGAGCTACTTGTGTTGAGGAACGAGTGGATGATCCATCGTCATTGGAGGTTGCAGAAGCAGCTCATGTTGGAAAGTCACCTGCTCGTTGGTTCCATCTGAGTTGGATTGACGTATCACTCCGTTTGTGGCAGAAGAGTAATGTAGAAAAGAACCCTGTTATGATTGAGGATAGAGATTTTACCTGCAGCTCATGTGGTTGCAGCTCATATGTGAACACCCCGGAATCCCTTTGTCGATCCCTTTATAGCCGAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NIF

Protein Analysis

735

Amino Acids

84.95

Weight (kDa)

6.45

Isoelectric Point (pI)

50.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	55 - 224	2.8e-16	NLI interacting factor-like phosphatase
NIF	PF03031	398 - 545	2.2e-16	NLI interacting factor-like phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009676)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02680 FvH4_4g35032 FvH4_6g12031
rosa_chinensis	RchiOBHm_Chr3g0463881
rosa_laevigata	RLG00000024739 RLG00000024742 RLG00000024745 RLG00000024748
rosa_multiflora	Rmu_co8025626.1_g000001 Rmu_co8196170.1_g000001 Rmu_sc0000517.1_g000007 Rmu_sc0004796.1_g000001 Rmu_sc0042095.1_g000001
rosa_roxburghii	Rroxscaffold_6G00416210
rosa_rugosa	Rorug03G0068800 Rorug03G0068900
rosa_samantha	Rh3AG125800 Rh3BG129900 Rh3CG132400 Rh3DG131000 Rh3DG131100
rosa_wichuraiana	Rw3G010620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2035
Acc16I	TGCGCA	1 cut(s)	1151
Acc36I	ACCTGC	3 cut(s)	913, 2035, 2138
AccI	GTMKAC	1 cut(s)	542
AccII	CGCG	2 cut(s)	203, 478
AciI	CCGC	3 cut(s)	7, 54, 1934
AclWI	GGATC	9 cut(s)	267, 434, 547, 703, 870, 1218, 1448, 1973, 2178
AcsI	RAATTY	3 cut(s)	381, 1395, 1895
AcuI	CTGAAG	4 cut(s)	246, 377, 1391, 1838
AcyI	GRCGYC	1 cut(s)	1904
AfaI	GTAC	2 cut(s)	171, 455
AflII	CTTAAG	2 cut(s)	722, 1739
AflIII	ACRYGT	1 cut(s)	372
AgsI	TTSAA	9 cut(s)	113, 380, 661, 679, 716, 779, 802, 1645, 1693
AhdI	GACNNNNNGTC	1 cut(s)	21
AjnI	CCWGG	2 cut(s)	165, 1194
AleI	CACNNNNGTG	1 cut(s)	878
Alw26I	GTCTC	4 cut(s)	8, 566, 1321, 1533
AlwI	GGATC	9 cut(s)	267, 434, 547, 703, 870, 1218, 1448, 1973, 2178
AlwNI	CAGNNNCTG	1 cut(s)	823
AoxI	GGCC	2 cut(s)	335, 1349
ApeKI	GCWGC	6 cut(s)	738, 1014, 1447, 2006, 2133, 2148
ApoI	RAATTY	3 cut(s)	381, 1395, 1895
ArsI	GACNNNNNNTTYG	2 cut(s)	1775, 1807
AseI	ATTAAT	1 cut(s)	1203
AspLEI	GCGC	3 cut(s)	205, 981, 1152
AspS9I	GGNCC	3 cut(s)	336, 1276, 1350
AsuC2I	CCSGG	1 cut(s)	2168
AsuHPI	GGTGA	2 cut(s)	68, 2016
AsuII	TTCGAA	1 cut(s)	1392
AvaII	GGWCC	1 cut(s)	1276
BanII	GRGCYC	2 cut(s)	892, 1113
BarI	GAAGNNNNNNTAC	2 cut(s)	1625, 1657
BauI	CACGAG	1 cut(s)	1103
BbsI	GAAGAC	2 cut(s)	17, 1590
BbvI	GCAGC	6 cut(s)	750, 1026, 1434, 2018, 2145, 2160
BccI	CCATC	7 cut(s)	44, 76, 250, 961, 1584, 1990, 2049
BcgI	CGANNNNNNTGC	2 cut(s)	1382, 1416
BciT130I	CCWGG	2 cut(s)	167, 1196
BclI	TGATCA	3 cut(s)	559, 751, 994
BcnI	CCSGG	1 cut(s)	2168
BcoDI	GTCTC	4 cut(s)	8, 566, 1321, 1533
BfaI	CTAG	4 cut(s)	179, 194, 1175, 1458
BfmI	CTRYAG	1 cut(s)	2131
BfrI	CTTAAG	2 cut(s)	722, 1739
BfuAI	ACCTGC	3 cut(s)	913, 2035, 2138
BisI	GCNGC	7 cut(s)	8, 739, 1015, 1448, 2007, 2134, 2149
BlsI	GCNGC	7 cut(s)	9, 740, 1016, 1449, 2008, 2135, 2150
BmcAI	AGTACT	1 cut(s)	455
Bme1390I	CCNGG	3 cut(s)	167, 1196, 2168
Bme18I	GGWCC	1 cut(s)	1276
BmeRI	GACNNNNNGTC	1 cut(s)	21
BmgT120I	GGNCC	3 cut(s)	336, 1276, 1350
BmiI	GGNNCC	1 cut(s)	2039
BmrFI	CCNGG	3 cut(s)	167, 1196, 2168
BmrI	ACTGGG	1 cut(s)	1634
BmsI	GCATC	1 cut(s)	1730
BmuI	ACTGGG	1 cut(s)	1634
BpiI	GAAGAC	2 cut(s)	17, 1590
BplI	GAGNNNNNCTC	2 cut(s)	1817, 1849
BpmI	CTGGAG	1 cut(s)	32
Bpu10I	CCTNAGC	1 cut(s)	332
Bpu14I	TTCGAA	1 cut(s)	1392
BpuMI	CCSGG	1 cut(s)	2168
BsaHI	GRCGYC	1 cut(s)	1904
BsaI	GGTCTC	1 cut(s)	1321
BsaJI	CCNNGG	2 cut(s)	1516, 2166
Bse1I	ACTGG	1 cut(s)	1629
Bse3DI	GCAATG	1 cut(s)	914
BseBI	CCWGG	2 cut(s)	167, 1196
BseDI	CCNNGG	2 cut(s)	1516, 2166
BseGI	GGATG	4 cut(s)	262, 1595, 1943, 1981
BseMI	GCAATG	1 cut(s)	914
BseMII	CTCAG	6 cut(s)	223, 1214, 1252, 1349, 1485, 2036
BseNI	ACTGG	1 cut(s)	1629
BseRI	GAGGAG	1 cut(s)	1407
BseXI	GCAGC	6 cut(s)	750, 1026, 1434, 2018, 2145, 2160
BseYI	CCCAGC	1 cut(s)	884
Bsh1236I	CGCG	2 cut(s)	203, 478
Bsh1285I	CGRYCG	1 cut(s)	1477
BshFI	GGCC	2 cut(s)	337, 1351
BsiEI	CGRYCG	1 cut(s)	1477
BsiSI	CCGG	1 cut(s)	2168
BslFI	GGGAC	6 cut(s)	288, 649, 1641, 1663, 1844, 1891
BsmAI	GTCTC	4 cut(s)	8, 566, 1321, 1533
BsmBI	CGTCTC	1 cut(s)	8
BsmFI	GGGAC	6 cut(s)	288, 649, 1641, 1663, 1844, 1891
BsnI	GGCC	2 cut(s)	337, 1351
Bso31I	GGTCTC	1 cut(s)	1321
Bsp119I	TTCGAA	1 cut(s)	1392
Bsp1286I	GDGCHC	2 cut(s)	892, 1113
BspACI	CCGC	3 cut(s)	7, 54, 1934
BspANI	GGCC	2 cut(s)	337, 1351
BspCNI	CTCAG	6 cut(s)	222, 1215, 1251, 1350, 1486, 2037
BspFNI	CGCG	2 cut(s)	203, 478
BspHI	TCATGA	1 cut(s)	136
BspLI	GGNNCC	1 cut(s)	2039
BspMAI	CTGCAG	1 cut(s)	2135
BspMI	ACCTGC	3 cut(s)	913, 2035, 2138
BspPI	GGATC	9 cut(s)	267, 434, 547, 703, 870, 1218, 1448, 1973, 2178
BspT104I	TTCGAA	1 cut(s)	1392
BspTI	CTTAAG	2 cut(s)	722, 1739
BspTNI	GGTCTC	1 cut(s)	1321
BsrDI	GCAATG	1 cut(s)	914
BsrI	ACTGG	1 cut(s)	1629
BssECI	CCNNGG	2 cut(s)	1516, 2166
BssNI	GRCGYC	1 cut(s)	1904
BssSI	CACGAG	1 cut(s)	1103
Bst2BI	CACGAG	1 cut(s)	1103
Bst2UI	CCWGG	2 cut(s)	167, 1196
Bst4CI	ACNGT	6 cut(s)	547, 653, 1094, 1145, 1306, 1632
Bst6I	CTCTTC	3 cut(s)	1658, 1731, 2075
BstACI	GRCGYC	1 cut(s)	1904
BstAFI	CTTAAG	2 cut(s)	722, 1739
BstBI	TTCGAA	1 cut(s)	1392
BstC8I	GCNNGC	6 cut(s)	367, 391, 531, 825, 937, 1154
BstDEI	CTNAG	8 cut(s)	209, 332, 1124, 1223, 1238, 1358, 1494, 2045
BstF5I	GGATG	4 cut(s)	262, 1595, 1943, 1981
BstFNI	CGCG	2 cut(s)	203, 478
BstHHI	GCGC	3 cut(s)	205, 981, 1152
BstMAI	GTCTC	4 cut(s)	8, 566, 1321, 1533
BstMCI	CGRYCG	1 cut(s)	1477
BstMWI	GCNNNNNNNGC	6 cut(s)	701, 820, 829, 1079, 1718, 2006
BstNI	CCWGG	2 cut(s)	167, 1196
BstNSI	RCATGY	2 cut(s)	376, 393
BstSCI	CCNGG	3 cut(s)	165, 1194, 2166
BstSFI	CTRYAG	1 cut(s)	2131
BstUI	CGCG	2 cut(s)	203, 478
BstV1I	GCAGC	6 cut(s)	750, 1026, 1434, 2018, 2145, 2160
BstV2I	GAAGAC	2 cut(s)	17, 1590
BstX2I	RGATCY	1 cut(s)	862
BstXI	CCANNNNNNTGG	1 cut(s)	880
BstYI	RGATCY	1 cut(s)	862
BsuRI	GGCC	2 cut(s)	337, 1351
BtsCI	GGATG	4 cut(s)	262, 1595, 1943, 1981
BtsI	GCAGTG	1 cut(s)	711
BtsIMutI	CAGTG	5 cut(s)	217, 658, 711, 1246, 1311
BveI	ACCTGC	3 cut(s)	913, 2035, 2138
Cac8I	GCNNGC	6 cut(s)	367, 391, 531, 825, 937, 1154
CaiI	CAGNNNCTG	1 cut(s)	823
CciI	TCATGA	1 cut(s)	136
CfoI	GCGC	3 cut(s)	205, 981, 1152
Cfr13I	GGNCC	3 cut(s)	336, 1276, 1350
CseI	GACGC	1 cut(s)	1893
CsiI	ACCWGGT	2 cut(s)	165, 1194
Csp6I	GTAC	2 cut(s)	170, 454
CviAII	CATG	7 cut(s)	137, 373, 390, 576, 998, 2012, 2139
CviQI	GTAC	2 cut(s)	170, 454
DdeI	CTNAG	8 cut(s)	209, 332, 1124, 1223, 1238, 1358, 1494, 2045
DraI	TTTAAA	1 cut(s)	631
DriI	GACNNNNNGTC	1 cut(s)	21
Eam1104I	CTCTTC	3 cut(s)	1658, 1731, 2075
Eam1105I	GACNNNNNGTC	1 cut(s)	21
EarI	CTCTTC	3 cut(s)	1658, 1731, 2075
EciI	GGCGGA	1 cut(s)	1949
Eco24I	GRGCYC	2 cut(s)	892, 1113
Eco31I	GGTCTC	1 cut(s)	1321
Eco32I	GATATC	3 cut(s)	410, 474, 1488
Eco47I	GGWCC	1 cut(s)	1276
Eco57I	CTGAAG	4 cut(s)	246, 377, 1391, 1838
EcoO109I	RGGNCCY	2 cut(s)	336, 1350
EcoRII	CCWGG	2 cut(s)	165, 1194
EcoRV	GATATC	3 cut(s)	410, 474, 1488
EcoT22I	ATGCAT	2 cut(s)	391, 1405
EcoT38I	GRGCYC	2 cut(s)	892, 1113
Esp3I	CGTCTC	1 cut(s)	8
FaeI	CATG	7 cut(s)	140, 376, 393, 579, 1001, 2015, 2142
FaqI	GGGAC	6 cut(s)	288, 649, 1641, 1663, 1844, 1891
FatI	CATG	7 cut(s)	136, 372, 389, 575, 997, 2011, 2138
FauNDI	CATATG	2 cut(s)	1405, 2155
FbaI	TGATCA	3 cut(s)	559, 751, 994
FblI	GTMKAC	1 cut(s)	542
Fnu4HI	GCNGC	7 cut(s)	8, 739, 1015, 1448, 2007, 2134, 2149
FokI	GGATG	4 cut(s)	249, 1602, 1930, 1988
FriOI	GRGCYC	2 cut(s)	892, 1113
Fsp4HI	GCNGC	7 cut(s)	8, 739, 1015, 1448, 2007, 2134, 2149
FspBI	CTAG	4 cut(s)	179, 194, 1175, 1458
FspI	TGCGCA	1 cut(s)	1151
GlaI	GCGC	3 cut(s)	204, 980, 1151
GluI	GCNGC	7 cut(s)	8, 739, 1015, 1448, 2007, 2134, 2149
GsaI	CCCAGC	1 cut(s)	888
GsuI	CTGGAG	1 cut(s)	32
HaeIII	GGCC	2 cut(s)	337, 1351
HapII	CCGG	1 cut(s)	2168
HgaI	GACGC	1 cut(s)	1893
HhaI	GCGC	3 cut(s)	205, 981, 1152
Hin1I	GRCGYC	1 cut(s)	1904
Hin1II	CATG	7 cut(s)	140, 376, 393, 579, 1001, 2015, 2142
Hin6I	GCGC	3 cut(s)	203, 979, 1150
HinP1I	GCGC	3 cut(s)	203, 979, 1150
HincII	GTYRAC	1 cut(s)	1919
HindII	GTYRAC	1 cut(s)	1919
HindIII	AAGCTT	1 cut(s)	329
HinfI	GANTC	7 cut(s)	41, 539, 1225, 1286, 1832, 1927, 2171
HpaII	CCGG	1 cut(s)	2168
HphI	GGTGA	2 cut(s)	68, 2016
Hpy166II	GTNNAC	6 cut(s)	119, 543, 644, 1180, 1919, 2161
Hpy188III	TCNNGA	9 cut(s)	137, 179, 405, 504, 518, 1028, 1208, 1532, 1947
Hpy8I	GTNNAC	6 cut(s)	119, 543, 644, 1180, 1919, 2161
HpyAV	CCTTC	9 cut(s)	107, 118, 352, 630, 722, 787, 1366, 1861, 1862
HpyCH4III	ACNGT	6 cut(s)	547, 653, 1094, 1145, 1306, 1632
HpyCH4IV	ACGT	2 cut(s)	894, 2058
HpyF10VI	GCNNNNNNNGC	6 cut(s)	701, 820, 829, 1079, 1718, 2006
HpyF3I	CTNAG	8 cut(s)	209, 332, 1124, 1223, 1238, 1358, 1494, 2045
HpySE526I	ACGT	2 cut(s)	894, 2058
Hsp92I	GRCGYC	1 cut(s)	1904
Hsp92II	CATG	7 cut(s)	140, 376, 393, 579, 1001, 2015, 2142
HspAI	GCGC	3 cut(s)	203, 979, 1150
Ksp22I	TGATCA	3 cut(s)	559, 751, 994
LmnI	GCTCC	3 cut(s)	583, 1420, 1936
Lsp1109I	GCAGC	6 cut(s)	750, 1026, 1434, 2018, 2145, 2160
LweI	GCATC	1 cut(s)	1730
MabI	ACCWGGT	2 cut(s)	165, 1194
MaeI	CTAG	4 cut(s)	179, 194, 1175, 1458
MaeII	ACGT	2 cut(s)	894, 2058
MaeIII	GTNAC	5 cut(s)	764, 1226, 1382, 1781, 2022
MflI	RGATCY	1 cut(s)	862
MhlI	GDGCHC	2 cut(s)	892, 1113
MlyI	GAGTC	4 cut(s)	50, 548, 1234, 1826
MmeI	TCCRAC	3 cut(s)	877, 1996, 2030
Mph1103I	ATGCAT	2 cut(s)	391, 1405
MslI	CAYNNNNRTG	1 cut(s)	878
MspCI	CTTAAG	2 cut(s)	722, 1739
MspI	CCGG	1 cut(s)	2168
MspR9I	CCNGG	3 cut(s)	167, 1196, 2168
MvaI	CCWGG	2 cut(s)	167, 1196
MvnI	CGCG	2 cut(s)	203, 478
MwoI	GCNNNNNNNGC	6 cut(s)	701, 820, 829, 1079, 1718, 2006
NciI	CCSGG	1 cut(s)	2168
NdeI	CATATG	2 cut(s)	1405, 2155
NlaIII	CATG	7 cut(s)	140, 376, 393, 579, 1001, 2015, 2142
NlaIV	GGNNCC	1 cut(s)	2039
NmuCI	GTSAC	5 cut(s)	764, 1226, 1382, 1781, 2022
NsbI	TGCGCA	1 cut(s)	1151
NsiI	ATGCAT	2 cut(s)	391, 1405
NspI	RCATGY	2 cut(s)	376, 393
NspV	TTCGAA	1 cut(s)	1392
OliI	CACNNNNGTG	1 cut(s)	878
PaeI	GCATGC	1 cut(s)	393
PagI	TCATGA	1 cut(s)	136
PaqCI	CACCTGC	1 cut(s)	2035
PciI	ACATGT	1 cut(s)	372
PfeI	GAWTC	3 cut(s)	1286, 1927, 2171
PkrI	GCNGC	7 cut(s)	9, 740, 1016, 1449, 2008, 2135, 2150
PleI	GAGTC	4 cut(s)	49, 547, 1233, 1826
PpsI	GAGTC	4 cut(s)	49, 547, 1233, 1826
PscI	ACATGT	1 cut(s)	372
PshBI	ATTAAT	1 cut(s)	1203
Psp6I	CCWGG	2 cut(s)	165, 1194
PspFI	CCCAGC	1 cut(s)	884
PspGI	CCWGG	2 cut(s)	165, 1194
PspN4I	GGNNCC	1 cut(s)	2039
PspPI	GGNCC	3 cut(s)	336, 1276, 1350
PstI	CTGCAG	1 cut(s)	2135
PstNI	CAGNNNCTG	1 cut(s)	823
PsuI	RGATCY	1 cut(s)	862
RsaI	GTAC	2 cut(s)	171, 455
RsaNI	GTAC	2 cut(s)	170, 454
RseI	CAYNNNNRTG	1 cut(s)	878
SatI	GCNGC	7 cut(s)	8, 739, 1015, 1448, 2007, 2134, 2149
Sau96I	GGNCC	3 cut(s)	336, 1276, 1350
ScaI	AGTACT	1 cut(s)	455
SchI	GAGTC	4 cut(s)	50, 548, 1234, 1826
ScrFI	CCNGG	3 cut(s)	167, 1196, 2168
SduI	GDGCHC	2 cut(s)	892, 1113
SexAI	ACCWGGT	2 cut(s)	165, 1194
SfaNI	GCATC	1 cut(s)	1730
SfcI	CTRYAG	1 cut(s)	2131
SfuI	TTCGAA	1 cut(s)	1392
SinI	GGWCC	1 cut(s)	1276
SmiMI	CAYNNNNRTG	1 cut(s)	878
SmlI	CTYRAG	2 cut(s)	722, 1739
SmoI	CTYRAG	2 cut(s)	722, 1739
SphI	GCATGC	1 cut(s)	393
SsiI	CCGC	3 cut(s)	7, 54, 1934
SspMI	CTAG	4 cut(s)	179, 194, 1175, 1458
StyD4I	CCNGG	3 cut(s)	165, 1194, 2166
TaaI	ACNGT	6 cut(s)	547, 653, 1094, 1145, 1306, 1632
TaiI	ACGT	2 cut(s)	897, 2061
TaqI	TCGA	9 cut(s)	406, 438, 869, 1392, 1420, 1452, 1606, 1794, 2182
TaqII	GACCGA	1 cut(s)	1463
TatI	WGTACW	1 cut(s)	453
TauI	GCSGC	1 cut(s)	10
TfiI	GAWTC	3 cut(s)	1286, 1927, 2171
TscAI	CASTG	5 cut(s)	217, 658, 711, 1246, 1311
TseFI	GTSAC	5 cut(s)	764, 1226, 1382, 1781, 2022
TseI	GCWGC	6 cut(s)	738, 1014, 1447, 2006, 2133, 2148
Tsp45I	GTSAC	5 cut(s)	764, 1226, 1382, 1781, 2022
TspGWI	ACGGA	7 cut(s)	32, 136, 596, 1602, 1687, 1720, 2057
TspRI	CASTG	5 cut(s)	217, 658, 711, 1246, 1311
Vha464I	CTTAAG	2 cut(s)	722, 1739
VpaK11BI	GGWCC	1 cut(s)	1276
VspI	ATTAAT	1 cut(s)	1203
XapI	RAATTY	3 cut(s)	381, 1395, 1895
XbaI	TCTAGA	1 cut(s)	178
XceI	RCATGY	2 cut(s)	376, 393
XmiI	GTMKAC	1 cut(s)	542
XspI	CTAG	4 cut(s)	179, 194, 1175, 1458
ZrmI	AGTACT	1 cut(s)	455
Zsp2I	ATGCAT	2 cut(s)	391, 1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.