Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0009676

Physical Location & Seq

Genomic Coordinates Reverse (-)

11184165 .. 11186444

Gene Structure 2280 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG131000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGATGCGGCTGGAGACGCATTGTCTTCCAATACATATTGAGTCTGATGATGGCGGTGATGAGGTTGCAAATAAAATTGAGATGGCAAAAAGGCGTAAGGTAAAGATTGATCATGGGCGAACAACAAGCAGCATAGATCATCAGGAGATCAAGCAGGGTGCTTCTGTTTCTTGTTTGTGTGATGTTTGTGTCAACTTTGCTGTGACATTCAGTTTTACCGATGATGAAATTGAAGGTTTACGGAAGGTCAATACTCATGAAATGCTACATCACAGAAAACTCCACCTGGTACTTAATCTAGAACGCACCCTGCTGGATCACGCGCAACTCAGTGATCTGACCCCTGAAGAAGATGAATATGTAAAGACTTTAACGATGGATCATCCTCTGCCTCTGCAAGATGTTCTCAAAGTGCAACATTGTCCCCAAATGAAGCCTATAATTGTCAAGCTTAGGCCCTTTGCGAGAGCCTTTCTGAAGGAAGCCAGCGACATGTTTGAAATTTATGCATACTCAAGTGCTTCTCGATATCTTGCGTGGAAAATGGTTGAGCTACTCGATCCTACAAATGAGTACTTTGGTCGTAGAGTGATATCGCGTGAGGATTTCGTTAGCACCTTTGCAGGAAAGAAGTGTCTTGATCTTGTGCTTGCCCAAGAGTCTACTGTTCTGATCCTTGATCATAAGCAAGAGACATGGACGGAGCAAAATCAAAATAATATAGTACTAACGCAAAAGTATCAGTTCTTTAAAGGAAGGGGTGAACAGAACAGTGAGTTCCAGTCCCATTGTGAGTTGAAAACTGATGAGGGGGCGTATCTTGCAGTGATCCTTCAACATCTTAAGCTAATTCACAGCAGCTTCTTTGATGATCAAGTGATGTGTGACAACCTTATTGAAAGAGATGTGAGGAAGGTGTTGAAAAATCTTCGGCAGCAGAAGCTGGCAGAGCAGTTGGGAACTACTTGTGATGAACAAATGGATCTATCGACCACACAGGTGGCTGGGGCTCACGTTGGACTGCCTGCTCGTTCATTGCAAATGGATTTTCCTGCTCGCTCACAGGAGGTTGCAAGTAATTATGAGATGGCAAAAAGGCGTAACTTAACGATTGATCATGGGGGAACAACAAGCAGCACAGATCATGAGGAGATCGGGGTTGTTTCTGCTTCTTTGTGTGATTATTGTGCCAACTTTGCTGACAGATACGGTTTTCTACACGAGGGGCTCTTAACCACCCTAAGTGCTGAACACATTTACCGTTTGCGCAAGCACAACACACAGAAAATGCTAGTCCACAAAAAACTCCACCTGGTAATTAATCTGGATCACACCTTTCTGAGTCACACAAGACTCAGTGATCTGACCCCAGAAGAAGCAGAAAATATAAAGGTCCAAGAAGATTCCCAAGATATTTTCACAGTGCGAGTTCCTCCAAAAATGAAACCTATTATTATCAAGTTCAGGCCCTTTCTGAGAACCTTTCTGAAGGAAGCCAGTGACTTTTTCGAAATTTATGCATATGCAAATGCTCCTCGATCTCTAGTGTGGAAAATTGTTGAGCTGCTCGATCCTAGAAATGAGTACTTCGGTCGTAGAGTGATATCGCGTGAGAGCTTTTATAGCACCCACCGAGGAAAGAAGTCTCTTGATCTTGTGCTTGGCCAAAAGTCTGCTGTTTTGGTGGTTGATGATGAAGAAGATGGATGGCAGGAGAAAAATCAAAATAATGTAATGCTACTGGGAGAGTATTGTTTCTTCAAAAAGACGAGTGGCAAGAAGAGAAAACGGAAGTCCCTTTGTGAGTTGAAATCTGATGAACGGGCTGCTTCTCTTGCATCTCTTCTTAAACAGCTTAAGCAAATACACAACAGGTTCTTTAATGATGAAATAATGTGTGACAACCTTTTTGACAGAGATGTGAGGGTGCTGTTAAAAATTGGGTGGGACTCTAATATTGACGATAGCCTTCAGTTTTGGAGGAAGGCAGTATCAAATTGTATGCGAAAAAAATTTGTGGCGTCCCTTAATTATCAACAGAAGAATTTGGCGGAGCAGTCATCCAAAGCTACTTGTGTTGAGGGACAAGCGGATGATCCATCGTCATTGGAGGCTGCAGAAGCAGCTCATATTGGAAAGTCACCTGCTCGTTGGTTCCATCTGAGTTGGATTGACACATCACTCCGTTTGTGGCAGAAGAGTAATGTAGAAAAGAACCCTGTTATGATTGAGGATAGCGATTTTACCTGCAGCTCATGCATCACAACTTTTTGTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NIF

Protein Analysis

759

Amino Acids

87.41

Weight (kDa)

6.44

Isoelectric Point (pI)

48.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	95 - 261	3.7e-18	NLI interacting factor-like phosphatase
NIF	PF03031	437 - 587	5.5e-18	NLI interacting factor-like phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009676)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02680 FvH4_4g35032 FvH4_6g12031
rosa_chinensis	RchiOBHm_Chr3g0463881
rosa_laevigata	RLG00000024739 RLG00000024742 RLG00000024745 RLG00000024748
rosa_multiflora	Rmu_co8025626.1_g000001 Rmu_co8196170.1_g000001 Rmu_sc0000517.1_g000007 Rmu_sc0004796.1_g000001 Rmu_sc0042095.1_g000001
rosa_roxburghii	Rroxscaffold_6G00416210
rosa_rugosa	Rorug03G0068800 Rorug03G0068900
rosa_samantha	Rh3AG125800 Rh3BG129900 Rh3CG132400 Rh3DG131000 Rh3DG131100
rosa_wichuraiana	Rw3G010620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2152
Acc16I	TGCGCA	1 cut(s)	1268
Acc36I	ACCTGC	2 cut(s)	2152, 2255
AccI	GTMKAC	1 cut(s)	662
AccII	CGCG	3 cut(s)	323, 598, 1609
AciI	CCGC	4 cut(s)	7, 54, 2051, 2090
AclWI	GGATC	9 cut(s)	324, 387, 554, 667, 823, 990, 1335, 1565, 2090
AcoI	YGGCCR	1 cut(s)	1663
AcsI	RAATTY	4 cut(s)	501, 1512, 2012, 2044
AcuI	CTGAAG	4 cut(s)	366, 497, 1508, 1955
AcyI	GRCGYC	1 cut(s)	2021
AfaI	GTAC	4 cut(s)	291, 575, 726, 1586
AflII	CTTAAG	2 cut(s)	842, 1856
AflIII	ACRYGT	1 cut(s)	492
AgsI	TTSAA	8 cut(s)	233, 500, 799, 836, 899, 922, 1762, 1810
AhdI	GACNNNNNGTC	1 cut(s)	21
AjnI	CCWGG	2 cut(s)	285, 1311
AleI	CACNNNNGTG	1 cut(s)	998
Alw26I	GTCTC	3 cut(s)	8, 686, 1650
AlwI	GGATC	9 cut(s)	324, 387, 554, 667, 823, 990, 1335, 1565, 2090
AlwNI	CAGNNNCTG	1 cut(s)	943
AoxI	GGCC	3 cut(s)	455, 1466, 1663
ApeKI	GCWGC	9 cut(s)	129, 858, 934, 1134, 1564, 1826, 2114, 2123, 2250
ApoI	RAATTY	4 cut(s)	501, 1512, 2012, 2044
ArsI	GACNNNNNNTTYG	2 cut(s)	1892, 1924
AseI	ATTAAT	1 cut(s)	1320
AspLEI	GCGC	2 cut(s)	325, 1269
AspS9I	GGNCC	3 cut(s)	456, 1393, 1467
AsuHPI	GGTGA	3 cut(s)	68, 773, 2133
AsuII	TTCGAA	1 cut(s)	1509
AvaII	GGWCC	1 cut(s)	1393
BalI	TGGCCA	1 cut(s)	1665
BanII	GRGCYC	2 cut(s)	1012, 1230
BarI	GAAGNNNNNNTAC	2 cut(s)	1742, 1774
BauI	CACGAG	1 cut(s)	1220
BbsI	GAAGAC	1 cut(s)	17
BbvI	GCAGC	9 cut(s)	141, 870, 946, 1146, 1551, 1813, 2101, 2135, 2262
BccI	CCATC	8 cut(s)	44, 76, 370, 1081, 1697, 1701, 2107, 2166
BcgI	CGANNNNNNTGC	2 cut(s)	1499, 1533
BciT130I	CCWGG	2 cut(s)	287, 1313
BclI	TGATCA	4 cut(s)	109, 679, 871, 1114
BcoDI	GTCTC	3 cut(s)	8, 686, 1650
BfaI	CTAG	4 cut(s)	299, 1292, 1544, 1575
BfmI	CTRYAG	2 cut(s)	2115, 2248
BfrI	CTTAAG	2 cut(s)	842, 1856
BfuAI	ACCTGC	2 cut(s)	2152, 2255
BmcAI	AGTACT	3 cut(s)	575, 726, 1586
Bme1390I	CCNGG	2 cut(s)	287, 1313
Bme18I	GGWCC	1 cut(s)	1393
BmeRI	GACNNNNNGTC	1 cut(s)	21
BmgT120I	GGNCC	3 cut(s)	456, 1393, 1467
BmiI	GGNNCC	1 cut(s)	2156
BmrFI	CCNGG	2 cut(s)	287, 1313
BmrI	ACTGGG	1 cut(s)	1751
BmsI	GCATC	2 cut(s)	1847, 2268
BmuI	ACTGGG	1 cut(s)	1751
BpiI	GAAGAC	1 cut(s)	17
BpmI	CTGGAG	1 cut(s)	32
Bpu10I	CCTNAGC	1 cut(s)	452
Bpu14I	TTCGAA	1 cut(s)	1509
BpuEI	CTTGAG	1 cut(s)	499
BsaHI	GRCGYC	1 cut(s)	2021
BsaJI	CCNNGG	1 cut(s)	1633
Bse1I	ACTGG	3 cut(s)	781, 1497, 1746
Bse3DI	GCAATG	1 cut(s)	1034
BseBI	CCWGG	2 cut(s)	287, 1313
BseDI	CCNNGG	1 cut(s)	1633
BseGI	GGATG	4 cut(s)	382, 1712, 2060, 2098
BseMI	GCAATG	1 cut(s)	1034
BseMII	CTCAG	5 cut(s)	343, 1331, 1369, 1466, 2153
BseNI	ACTGG	3 cut(s)	781, 1497, 1746
BseRI	GAGGAG	2 cut(s)	1163, 1524
BseXI	GCAGC	9 cut(s)	141, 870, 946, 1146, 1551, 1813, 2101, 2135, 2262
BseYI	CCCAGC	1 cut(s)	1004
Bsh1236I	CGCG	3 cut(s)	323, 598, 1609
Bsh1285I	CGRYCG	1 cut(s)	1594
BshFI	GGCC	3 cut(s)	457, 1468, 1665
BsiEI	CGRYCG	1 cut(s)	1594
BslFI	GGGAC	6 cut(s)	408, 769, 1780, 1961, 2008, 2097
BsmAI	GTCTC	3 cut(s)	8, 686, 1650
BsmBI	CGTCTC	1 cut(s)	8
BsmFI	GGGAC	6 cut(s)	408, 769, 1780, 1961, 2008, 2097
BsnI	GGCC	3 cut(s)	457, 1468, 1665
Bsp119I	TTCGAA	1 cut(s)	1509
Bsp1286I	GDGCHC	2 cut(s)	1012, 1230
BspACI	CCGC	4 cut(s)	7, 54, 2051, 2090
BspANI	GGCC	3 cut(s)	457, 1468, 1665
BspCNI	CTCAG	5 cut(s)	342, 1332, 1368, 1467, 2154
BspFNI	CGCG	3 cut(s)	323, 598, 1609
BspHI	TCATGA	2 cut(s)	256, 1144
BspLI	GGNNCC	1 cut(s)	2156
BspMAI	CTGCAG	2 cut(s)	2119, 2252
BspMI	ACCTGC	2 cut(s)	2152, 2255
BspPI	GGATC	9 cut(s)	324, 387, 554, 667, 823, 990, 1335, 1565, 2090
BspT104I	TTCGAA	1 cut(s)	1509
BspTI	CTTAAG	2 cut(s)	842, 1856
BsrDI	GCAATG	1 cut(s)	1034
BsrI	ACTGG	3 cut(s)	781, 1497, 1746
BssECI	CCNNGG	1 cut(s)	1633
BssNI	GRCGYC	1 cut(s)	2021
BssSI	CACGAG	1 cut(s)	1220
Bst2BI	CACGAG	1 cut(s)	1220
Bst2UI	CCWGG	2 cut(s)	287, 1313
Bst4CI	ACNGT	5 cut(s)	667, 773, 1211, 1262, 1423
Bst6I	CTCTTC	3 cut(s)	1775, 1848, 2192
BstACI	GRCGYC	1 cut(s)	2021
BstAFI	CTTAAG	2 cut(s)	842, 1856
BstAPI	GCANNNNNTGC	1 cut(s)	2256
BstBI	TTCGAA	1 cut(s)	1509
BstC8I	GCNNGC	6 cut(s)	487, 651, 945, 1026, 1057, 1271
BstDEI	CTNAG	7 cut(s)	329, 452, 1241, 1340, 1355, 1475, 2162
BstF5I	GGATG	4 cut(s)	382, 1712, 2060, 2098
BstFNI	CGCG	3 cut(s)	323, 598, 1609
BstHHI	GCGC	2 cut(s)	325, 1269
BstMAI	GTCTC	3 cut(s)	8, 686, 1650
BstMCI	CGRYCG	1 cut(s)	1594
BstNI	CCWGG	2 cut(s)	287, 1313
BstNSI	RCATGY	1 cut(s)	496
BstSCI	CCNGG	2 cut(s)	285, 1311
BstSFI	CTRYAG	2 cut(s)	2115, 2248
BstUI	CGCG	3 cut(s)	323, 598, 1609
BstV1I	GCAGC	9 cut(s)	141, 870, 946, 1146, 1551, 1813, 2101, 2135, 2262
BstV2I	GAAGAC	1 cut(s)	17
BstX2I	RGATCY	1 cut(s)	982
BstXI	CCANNNNNNTGG	1 cut(s)	1000
BstYI	RGATCY	1 cut(s)	982
BsuRI	GGCC	3 cut(s)	457, 1468, 1665
BtsCI	GGATG	4 cut(s)	382, 1712, 2060, 2098
BtsI	GCAGTG	1 cut(s)	831
BtsIMutI	CAGTG	6 cut(s)	337, 778, 831, 1363, 1428, 1504
BveI	ACCTGC	2 cut(s)	2152, 2255
Cac8I	GCNNGC	6 cut(s)	487, 651, 945, 1026, 1057, 1271
CaiI	CAGNNNCTG	1 cut(s)	943
CciI	TCATGA	2 cut(s)	256, 1144
CfoI	GCGC	2 cut(s)	325, 1269
Cfr13I	GGNCC	3 cut(s)	456, 1393, 1467
CseI	GACGC	2 cut(s)	25, 2010
CsiI	ACCWGGT	2 cut(s)	285, 1311
Csp6I	GTAC	4 cut(s)	290, 574, 725, 1585
CviAII	CATG	7 cut(s)	113, 257, 493, 696, 1118, 1145, 2256
CviQI	GTAC	4 cut(s)	290, 574, 725, 1585
DdeI	CTNAG	7 cut(s)	329, 452, 1241, 1340, 1355, 1475, 2162
DraI	TTTAAA	1 cut(s)	751
DriI	GACNNNNNGTC	1 cut(s)	21
EaeI	YGGCCR	1 cut(s)	1663
Eam1104I	CTCTTC	3 cut(s)	1775, 1848, 2192
Eam1105I	GACNNNNNGTC	1 cut(s)	21
EarI	CTCTTC	3 cut(s)	1775, 1848, 2192
EciI	GGCGGA	1 cut(s)	2066
Eco24I	GRGCYC	2 cut(s)	1012, 1230
Eco32I	GATATC	3 cut(s)	530, 594, 1605
Eco47I	GGWCC	1 cut(s)	1393
Eco57I	CTGAAG	4 cut(s)	366, 497, 1508, 1955
EcoO109I	RGGNCCY	2 cut(s)	456, 1467
EcoRII	CCWGG	2 cut(s)	285, 1311
EcoRV	GATATC	3 cut(s)	530, 594, 1605
EcoT22I	ATGCAT	3 cut(s)	511, 1522, 2261
EcoT38I	GRGCYC	2 cut(s)	1012, 1230
Esp3I	CGTCTC	1 cut(s)	8
FaeI	CATG	7 cut(s)	116, 260, 496, 699, 1121, 1148, 2259
FaqI	GGGAC	6 cut(s)	408, 769, 1780, 1961, 2008, 2097
FatI	CATG	7 cut(s)	112, 256, 492, 695, 1117, 1144, 2255
FauNDI	CATATG	1 cut(s)	1522
FbaI	TGATCA	4 cut(s)	109, 679, 871, 1114
FblI	GTMKAC	1 cut(s)	662
FokI	GGATG	4 cut(s)	369, 1719, 2047, 2105
FriOI	GRGCYC	2 cut(s)	1012, 1230
FspBI	CTAG	4 cut(s)	299, 1292, 1544, 1575
FspI	TGCGCA	1 cut(s)	1268
GlaI	GCGC	2 cut(s)	324, 1268
GsaI	CCCAGC	1 cut(s)	1008
GsuI	CTGGAG	1 cut(s)	32
HaeIII	GGCC	3 cut(s)	457, 1468, 1665
HgaI	GACGC	2 cut(s)	25, 2010
HhaI	GCGC	2 cut(s)	325, 1269
Hin1I	GRCGYC	1 cut(s)	2021
Hin1II	CATG	7 cut(s)	116, 260, 496, 699, 1121, 1148, 2259
Hin6I	GCGC	2 cut(s)	323, 1267
HinP1I	GCGC	2 cut(s)	323, 1267
HincII	GTYRAC	1 cut(s)	193
HindII	GTYRAC	1 cut(s)	193
HindIII	AAGCTT	1 cut(s)	449
HinfI	GANTC	6 cut(s)	41, 659, 1342, 1353, 1403, 1949
HphI	GGTGA	3 cut(s)	68, 773, 2133
Hpy166II	GTNNAC	5 cut(s)	193, 239, 663, 764, 1297
Hpy188III	TCNNGA	8 cut(s)	143, 257, 299, 525, 638, 1145, 1325, 1649
Hpy8I	GTNNAC	5 cut(s)	193, 239, 663, 764, 1297
HpyAV	CCTTC	9 cut(s)	227, 238, 472, 750, 842, 907, 1483, 1978, 1979
HpyCH4III	ACNGT	5 cut(s)	667, 773, 1211, 1262, 1423
HpyCH4IV	ACGT	1 cut(s)	1014
HpyF3I	CTNAG	7 cut(s)	329, 452, 1241, 1340, 1355, 1475, 2162
HpySE526I	ACGT	1 cut(s)	1014
Hsp92I	GRCGYC	1 cut(s)	2021
Hsp92II	CATG	7 cut(s)	116, 260, 496, 699, 1121, 1148, 2259
HspAI	GCGC	2 cut(s)	323, 1267
Ksp22I	TGATCA	4 cut(s)	109, 679, 871, 1114
LmnI	GCTCC	3 cut(s)	703, 1537, 2053
Lsp1109I	GCAGC	9 cut(s)	141, 870, 946, 1146, 1551, 1813, 2101, 2135, 2262
LweI	GCATC	2 cut(s)	1847, 2268
MabI	ACCWGGT	2 cut(s)	285, 1311
MaeI	CTAG	4 cut(s)	299, 1292, 1544, 1575
MaeII	ACGT	1 cut(s)	1014
MaeIII	GTNAC	7 cut(s)	202, 884, 1100, 1343, 1499, 1898, 2139
MflI	RGATCY	1 cut(s)	982
MhlI	GDGCHC	2 cut(s)	1012, 1230
MlsI	TGGCCA	1 cut(s)	1665
MluNI	TGGCCA	1 cut(s)	1665
MlyI	GAGTC	5 cut(s)	50, 668, 1347, 1351, 1943
MmeI	TCCRAC	2 cut(s)	997, 2147
Mox20I	TGGCCA	1 cut(s)	1665
Mph1103I	ATGCAT	3 cut(s)	511, 1522, 2261
MscI	TGGCCA	1 cut(s)	1665
MslI	CAYNNNNRTG	1 cut(s)	998
Msp20I	TGGCCA	1 cut(s)	1665
MspCI	CTTAAG	2 cut(s)	842, 1856
MspR9I	CCNGG	2 cut(s)	287, 1313
MvaI	CCWGG	2 cut(s)	287, 1313
MvnI	CGCG	3 cut(s)	323, 598, 1609
NdeI	CATATG	1 cut(s)	1522
NlaIII	CATG	7 cut(s)	116, 260, 496, 699, 1121, 1148, 2259
NlaIV	GGNNCC	1 cut(s)	2156
NmuCI	GTSAC	6 cut(s)	202, 884, 1343, 1499, 1898, 2139
NsbI	TGCGCA	1 cut(s)	1268
NsiI	ATGCAT	3 cut(s)	511, 1522, 2261
NspI	RCATGY	1 cut(s)	496
NspV	TTCGAA	1 cut(s)	1509
OliI	CACNNNNGTG	1 cut(s)	998
PagI	TCATGA	2 cut(s)	256, 1144
PaqCI	CACCTGC	1 cut(s)	2152
PciI	ACATGT	1 cut(s)	492
PfeI	GAWTC	1 cut(s)	1403
PleI	GAGTC	5 cut(s)	49, 667, 1347, 1350, 1943
PpsI	GAGTC	5 cut(s)	49, 667, 1347, 1350, 1943
PscI	ACATGT	1 cut(s)	492
PshBI	ATTAAT	1 cut(s)	1320
Psp6I	CCWGG	2 cut(s)	285, 1311
PspFI	CCCAGC	1 cut(s)	1004
PspGI	CCWGG	2 cut(s)	285, 1311
PspN4I	GGNNCC	1 cut(s)	2156
PspPI	GGNCC	3 cut(s)	456, 1393, 1467
PstI	CTGCAG	2 cut(s)	2119, 2252
PstNI	CAGNNNCTG	1 cut(s)	943
PsuI	RGATCY	1 cut(s)	982
RsaI	GTAC	4 cut(s)	291, 575, 726, 1586
RsaNI	GTAC	4 cut(s)	290, 574, 725, 1585
RseI	CAYNNNNRTG	1 cut(s)	998
Sau96I	GGNCC	3 cut(s)	456, 1393, 1467
ScaI	AGTACT	3 cut(s)	575, 726, 1586
SchI	GAGTC	5 cut(s)	50, 668, 1347, 1351, 1943
ScrFI	CCNGG	2 cut(s)	287, 1313
SduI	GDGCHC	2 cut(s)	1012, 1230
SexAI	ACCWGGT	2 cut(s)	285, 1311
SfaNI	GCATC	2 cut(s)	1847, 2268
SfcI	CTRYAG	2 cut(s)	2115, 2248
SfuI	TTCGAA	1 cut(s)	1509
SinI	GGWCC	1 cut(s)	1393
SmiMI	CAYNNNNRTG	1 cut(s)	998
SmlI	CTYRAG	3 cut(s)	514, 842, 1856
SmoI	CTYRAG	3 cut(s)	514, 842, 1856
SsiI	CCGC	4 cut(s)	7, 54, 2051, 2090
SspI	AATATT	1 cut(s)	1957
SspMI	CTAG	4 cut(s)	299, 1292, 1544, 1575
StyD4I	CCNGG	2 cut(s)	285, 1311
TaaI	ACNGT	5 cut(s)	667, 773, 1211, 1262, 1423
TaiI	ACGT	1 cut(s)	1017
TaqI	TCGA	6 cut(s)	526, 558, 989, 1509, 1537, 1569
TaqII	GACCGA	1 cut(s)	1580
TatI	WGTACW	3 cut(s)	573, 724, 1584
TauI	GCSGC	1 cut(s)	10
TfiI	GAWTC	1 cut(s)	1403
TscAI	CASTG	6 cut(s)	337, 778, 831, 1363, 1428, 1504
TseFI	GTSAC	6 cut(s)	202, 884, 1343, 1499, 1898, 2139
TseI	GCWGC	9 cut(s)	129, 858, 934, 1134, 1564, 1826, 2114, 2123, 2250
Tsp45I	GTSAC	6 cut(s)	202, 884, 1343, 1499, 1898, 2139
TspGWI	ACGGA	4 cut(s)	256, 716, 1804, 2174
TspRI	CASTG	6 cut(s)	337, 778, 831, 1363, 1428, 1504
Vha464I	CTTAAG	2 cut(s)	842, 1856
VpaK11BI	GGWCC	1 cut(s)	1393
VspI	ATTAAT	1 cut(s)	1320
XapI	RAATTY	4 cut(s)	501, 1512, 2012, 2044
XbaI	TCTAGA	1 cut(s)	298
XceI	RCATGY	1 cut(s)	496
XmiI	GTMKAC	1 cut(s)	662
XspI	CTAG	4 cut(s)	299, 1292, 1544, 1575
ZrmI	AGTACT	3 cut(s)	575, 726, 1586
Zsp2I	ATGCAT	3 cut(s)	511, 1522, 2261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.