RNA polymerase II C-terminal domain phosphatase-like 4
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g02680 FvH4_4g35032 FvH4_6g12031 |
| rosa_chinensis | RchiOBHm_Chr3g0463881 |
| rosa_laevigata | RLG00000024739 RLG00000024742 RLG00000024745 RLG00000024748 |
| rosa_multiflora | Rmu_co8025626.1_g000001 Rmu_co8196170.1_g000001 Rmu_sc0000517.1_g000007 Rmu_sc0004796.1_g000001 Rmu_sc0042095.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00416210 |
| rosa_rugosa | Rorug03G0068800 Rorug03G0068900 |
| rosa_samantha | Rh3AG125800 Rh3BG129900 Rh3CG132400 Rh3DG131000 Rh3DG131100 |
| rosa_wichuraiana | Rw3G010620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2155 |
| Acc16I | TGCGCA | 1 cut(s) | 1271 |
| Acc36I | ACCTGC | 3 cut(s) | 1033, 2155, 2258 |
| AccI | GTMKAC | 1 cut(s) | 662 |
| AccII | CGCG | 3 cut(s) | 323, 598, 1612 |
| AciI | CCGC | 4 cut(s) | 7, 54, 2054, 2093 |
| AclWI | GGATC | 9 cut(s) | 324, 387, 554, 667, 823, 990, 1338, 1568, 2093 |
| AcoI | YGGCCR | 1 cut(s) | 1666 |
| AcsI | RAATTY | 4 cut(s) | 501, 1515, 2015, 2047 |
| AcuI | CTGAAG | 4 cut(s) | 366, 497, 1511, 1958 |
| AcyI | GRCGYC | 1 cut(s) | 2024 |
| AfaI | GTAC | 4 cut(s) | 291, 575, 726, 1589 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 465 |
| AflII | CTTAAG | 2 cut(s) | 842, 1859 |
| AflIII | ACRYGT | 1 cut(s) | 492 |
| AgsI | TTSAA | 9 cut(s) | 233, 500, 781, 799, 836, 899, 922, 1765, 1813 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 21 |
| AjnI | CCWGG | 2 cut(s) | 285, 1314 |
| AleI | CACNNNNGTG | 1 cut(s) | 998 |
| Alw26I | GTCTC | 3 cut(s) | 8, 686, 1653 |
| AlwI | GGATC | 9 cut(s) | 324, 387, 554, 667, 823, 990, 1338, 1568, 2093 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 943 |
| AoxI | GGCC | 4 cut(s) | 455, 468, 1469, 1666 |
| ApeKI | GCWGC | 7 cut(s) | 129, 858, 1134, 1567, 1829, 2126, 2253 |
| ApoI | RAATTY | 4 cut(s) | 501, 1515, 2015, 2047 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1895, 1927 |
| AseI | ATTAAT | 1 cut(s) | 1323 |
| AspLEI | GCGC | 2 cut(s) | 325, 1272 |
| AspS9I | GGNCC | 4 cut(s) | 456, 468, 1396, 1470 |
| AsuHPI | GGTGA | 2 cut(s) | 68, 2136 |
| AsuII | TTCGAA | 1 cut(s) | 1512 |
| AvaII | GGWCC | 1 cut(s) | 1396 |
| BalI | TGGCCA | 1 cut(s) | 1668 |
| BanII | GRGCYC | 2 cut(s) | 1012, 1233 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1745, 1777 |
| BauI | CACGAG | 1 cut(s) | 1223 |
| BbsI | GAAGAC | 1 cut(s) | 17 |
| BbvI | GCAGC | 7 cut(s) | 141, 870, 1146, 1554, 1816, 2138, 2265 |
| BccI | CCATC | 8 cut(s) | 44, 76, 370, 1081, 1700, 1704, 2110, 2169 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1502, 1536 |
| BciT130I | CCWGG | 2 cut(s) | 287, 1316 |
| BclI | TGATCA | 4 cut(s) | 109, 679, 871, 1114 |
| BcoDI | GTCTC | 3 cut(s) | 8, 686, 1653 |
| BfaI | CTAG | 3 cut(s) | 299, 1295, 1578 |
| BfmI | CTRYAG | 1 cut(s) | 2251 |
| BfrI | CTTAAG | 2 cut(s) | 842, 1859 |
| BfuAI | ACCTGC | 3 cut(s) | 1033, 2155, 2258 |
| BisI | GCNGC | 8 cut(s) | 8, 130, 859, 1135, 1568, 1830, 2127, 2254 |
| BlsI | GCNGC | 8 cut(s) | 9, 131, 860, 1136, 1569, 1831, 2128, 2255 |
| BmcAI | AGTACT | 3 cut(s) | 575, 726, 1589 |
| Bme1390I | CCNGG | 2 cut(s) | 287, 1316 |
| Bme18I | GGWCC | 1 cut(s) | 1396 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 21 |
| BmgT120I | GGNCC | 4 cut(s) | 456, 468, 1396, 1470 |
| BmiI | GGNNCC | 1 cut(s) | 2159 |
| BmrFI | CCNGG | 2 cut(s) | 287, 1316 |
| BmrI | ACTGGG | 1 cut(s) | 1754 |
| BmsI | GCATC | 2 cut(s) | 1850, 2271 |
| BmuI | ACTGGG | 1 cut(s) | 1754 |
| BpiI | GAAGAC | 1 cut(s) | 17 |
| BpmI | CTGGAG | 1 cut(s) | 32 |
| Bpu10I | CCTNAGC | 1 cut(s) | 452 |
| Bpu14I | TTCGAA | 1 cut(s) | 1512 |
| BpuEI | CTTGAG | 1 cut(s) | 499 |
| Bsa29I | ATCGAT | 1 cut(s) | 989 |
| BsaHI | GRCGYC | 1 cut(s) | 2024 |
| BsaJI | CCNNGG | 1 cut(s) | 1636 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 465 |
| Bse1I | ACTGG | 2 cut(s) | 1500, 1749 |
| Bse3DI | GCAATG | 1 cut(s) | 1034 |
| BseBI | CCWGG | 2 cut(s) | 287, 1316 |
| BseCI | ATCGAT | 1 cut(s) | 989 |
| BseDI | CCNNGG | 1 cut(s) | 1636 |
| BseGI | GGATG | 3 cut(s) | 382, 1715, 2101 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 465 |
| BseMI | GCAATG | 1 cut(s) | 1034 |
| BseMII | CTCAG | 5 cut(s) | 343, 1334, 1372, 1469, 2156 |
| BseNI | ACTGG | 2 cut(s) | 1500, 1749 |
| BseRI | GAGGAG | 2 cut(s) | 1163, 1527 |
| BseXI | GCAGC | 7 cut(s) | 141, 870, 1146, 1554, 1816, 2138, 2265 |
| BseYI | CCCAGC | 1 cut(s) | 1004 |
| Bsh1236I | CGCG | 3 cut(s) | 323, 598, 1612 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1597 |
| BshFI | GGCC | 4 cut(s) | 457, 470, 1471, 1668 |
| BshVI | ATCGAT | 1 cut(s) | 989 |
| BsiEI | CGRYCG | 1 cut(s) | 1597 |
| BslFI | GGGAC | 5 cut(s) | 408, 769, 1783, 1964, 2011 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 465 |
| BsmAI | GTCTC | 3 cut(s) | 8, 686, 1653 |
| BsmBI | CGTCTC | 1 cut(s) | 8 |
| BsmFI | GGGAC | 5 cut(s) | 408, 769, 1783, 1964, 2011 |
| BsnI | GGCC | 4 cut(s) | 457, 470, 1471, 1668 |
| Bsp119I | TTCGAA | 1 cut(s) | 1512 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1012, 1233 |
| BspACI | CCGC | 4 cut(s) | 7, 54, 2054, 2093 |
| BspANI | GGCC | 4 cut(s) | 457, 470, 1471, 1668 |
| BspCNI | CTCAG | 5 cut(s) | 342, 1335, 1371, 1470, 2157 |
| BspDI | ATCGAT | 1 cut(s) | 989 |
| BspFNI | CGCG | 3 cut(s) | 323, 598, 1612 |
| BspHI | TCATGA | 2 cut(s) | 256, 1144 |
| BspLI | GGNNCC | 1 cut(s) | 2159 |
| BspMAI | CTGCAG | 1 cut(s) | 2255 |
| BspMI | ACCTGC | 3 cut(s) | 1033, 2155, 2258 |
| BspPI | GGATC | 9 cut(s) | 324, 387, 554, 667, 823, 990, 1338, 1568, 2093 |
| BspT104I | TTCGAA | 1 cut(s) | 1512 |
| BspTI | CTTAAG | 2 cut(s) | 842, 1859 |
| BsrDI | GCAATG | 1 cut(s) | 1034 |
| BsrI | ACTGG | 2 cut(s) | 1500, 1749 |
| BssECI | CCNNGG | 1 cut(s) | 1636 |
| BssNI | GRCGYC | 1 cut(s) | 2024 |
| BssSI | CACGAG | 1 cut(s) | 1223 |
| Bst2BI | CACGAG | 1 cut(s) | 1223 |
| Bst2UI | CCWGG | 2 cut(s) | 287, 1316 |
| Bst4CI | ACNGT | 5 cut(s) | 667, 773, 1214, 1265, 1426 |
| Bst6I | CTCTTC | 3 cut(s) | 1778, 1851, 2195 |
| BstACI | GRCGYC | 1 cut(s) | 2024 |
| BstAFI | CTTAAG | 2 cut(s) | 842, 1859 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2259 |
| BstBI | TTCGAA | 1 cut(s) | 1512 |
| BstC8I | GCNNGC | 5 cut(s) | 487, 651, 945, 1057, 1274 |
| BstDEI | CTNAG | 7 cut(s) | 329, 452, 1244, 1343, 1358, 1478, 2165 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 463 |
| BstF5I | GGATG | 3 cut(s) | 382, 1715, 2101 |
| BstFNI | CGCG | 3 cut(s) | 323, 598, 1612 |
| BstHHI | GCGC | 2 cut(s) | 325, 1272 |
| BstMAI | GTCTC | 3 cut(s) | 8, 686, 1653 |
| BstMCI | CGRYCG | 1 cut(s) | 1597 |
| BstNI | CCWGG | 2 cut(s) | 287, 1316 |
| BstNSI | RCATGY | 1 cut(s) | 496 |
| BstSCI | CCNGG | 2 cut(s) | 285, 1314 |
| BstSFI | CTRYAG | 1 cut(s) | 2251 |
| BstUI | CGCG | 3 cut(s) | 323, 598, 1612 |
| BstV1I | GCAGC | 7 cut(s) | 141, 870, 1146, 1554, 1816, 2138, 2265 |
| BstV2I | GAAGAC | 1 cut(s) | 17 |
| BstX2I | RGATCY | 1 cut(s) | 982 |
| BstYI | RGATCY | 1 cut(s) | 982 |
| Bsu15I | ATCGAT | 1 cut(s) | 989 |
| BsuRI | GGCC | 4 cut(s) | 457, 470, 1471, 1668 |
| BsuTUI | ATCGAT | 1 cut(s) | 989 |
| BtsCI | GGATG | 3 cut(s) | 382, 1715, 2101 |
| BtsI | GCAGTG | 1 cut(s) | 831 |
| BtsIMutI | CAGTG | 6 cut(s) | 337, 778, 831, 1366, 1431, 1507 |
| BveI | ACCTGC | 3 cut(s) | 1033, 2155, 2258 |
| Cac8I | GCNNGC | 5 cut(s) | 487, 651, 945, 1057, 1274 |
| CaiI | CAGNNNCTG | 1 cut(s) | 943 |
| CciI | TCATGA | 2 cut(s) | 256, 1144 |
| CfoI | GCGC | 2 cut(s) | 325, 1272 |
| Cfr13I | GGNCC | 4 cut(s) | 456, 468, 1396, 1470 |
| ClaI | ATCGAT | 1 cut(s) | 989 |
| CseI | GACGC | 2 cut(s) | 25, 2013 |
| CsiI | ACCWGGT | 2 cut(s) | 285, 1314 |
| Csp6I | GTAC | 4 cut(s) | 290, 574, 725, 1588 |
| CviAII | CATG | 8 cut(s) | 113, 257, 493, 696, 1118, 1145, 2132, 2259 |
| CviQI | GTAC | 4 cut(s) | 290, 574, 725, 1588 |
| DdeI | CTNAG | 7 cut(s) | 329, 452, 1244, 1343, 1358, 1478, 2165 |
| DraI | TTTAAA | 1 cut(s) | 751 |
| DriI | GACNNNNNGTC | 1 cut(s) | 21 |
| EaeI | YGGCCR | 1 cut(s) | 1666 |
| Eam1104I | CTCTTC | 3 cut(s) | 1778, 1851, 2195 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 21 |
| EarI | CTCTTC | 3 cut(s) | 1778, 1851, 2195 |
| EciI | GGCGGA | 1 cut(s) | 2069 |
| Eco24I | GRGCYC | 2 cut(s) | 1012, 1233 |
| Eco32I | GATATC | 3 cut(s) | 530, 594, 1608 |
| Eco47I | GGWCC | 1 cut(s) | 1396 |
| Eco57I | CTGAAG | 4 cut(s) | 366, 497, 1511, 1958 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 463 |
| EcoO109I | RGGNCCY | 3 cut(s) | 456, 468, 1470 |
| EcoRII | CCWGG | 2 cut(s) | 285, 1314 |
| EcoRV | GATATC | 3 cut(s) | 530, 594, 1608 |
| EcoT22I | ATGCAT | 3 cut(s) | 511, 1525, 2264 |
| EcoT38I | GRGCYC | 2 cut(s) | 1012, 1233 |
| Esp3I | CGTCTC | 1 cut(s) | 8 |
| FaeI | CATG | 8 cut(s) | 116, 260, 496, 699, 1121, 1148, 2135, 2262 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1088, 1120 |
| FaqI | GGGAC | 5 cut(s) | 408, 769, 1783, 1964, 2011 |
| FatI | CATG | 8 cut(s) | 112, 256, 492, 695, 1117, 1144, 2131, 2258 |
| FauNDI | CATATG | 1 cut(s) | 1525 |
| FbaI | TGATCA | 4 cut(s) | 109, 679, 871, 1114 |
| FblI | GTMKAC | 1 cut(s) | 662 |
| Fnu4HI | GCNGC | 8 cut(s) | 8, 130, 859, 1135, 1568, 1830, 2127, 2254 |
| FokI | GGATG | 3 cut(s) | 369, 1722, 2108 |
| FriOI | GRGCYC | 2 cut(s) | 1012, 1233 |
| Fsp4HI | GCNGC | 8 cut(s) | 8, 130, 859, 1135, 1568, 1830, 2127, 2254 |
| FspBI | CTAG | 3 cut(s) | 299, 1295, 1578 |
| FspI | TGCGCA | 1 cut(s) | 1271 |
| GlaI | GCGC | 2 cut(s) | 324, 1271 |
| GluI | GCNGC | 8 cut(s) | 8, 130, 859, 1135, 1568, 1830, 2127, 2254 |
| GsaI | CCCAGC | 1 cut(s) | 1008 |
| GsuI | CTGGAG | 1 cut(s) | 32 |
| HaeIII | GGCC | 4 cut(s) | 457, 470, 1471, 1668 |
| HgaI | GACGC | 2 cut(s) | 25, 2013 |
| HhaI | GCGC | 2 cut(s) | 325, 1272 |
| Hin1I | GRCGYC | 1 cut(s) | 2024 |
| Hin1II | CATG | 8 cut(s) | 116, 260, 496, 699, 1121, 1148, 2135, 2262 |
| Hin6I | GCGC | 2 cut(s) | 323, 1270 |
| HinP1I | GCGC | 2 cut(s) | 323, 1270 |
| HindIII | AAGCTT | 1 cut(s) | 449 |
| HinfI | GANTC | 6 cut(s) | 41, 659, 1184, 1345, 1406, 1952 |
| HphI | GGTGA | 2 cut(s) | 68, 2136 |
| Hpy166II | GTNNAC | 4 cut(s) | 239, 663, 764, 1300 |
| Hpy188III | TCNNGA | 7 cut(s) | 143, 257, 299, 525, 1145, 1328, 1652 |
| Hpy8I | GTNNAC | 4 cut(s) | 239, 663, 764, 1300 |
| HpyAV | CCTTC | 9 cut(s) | 227, 238, 472, 750, 842, 907, 1486, 1981, 1982 |
| HpyCH4III | ACNGT | 5 cut(s) | 667, 773, 1214, 1265, 1426 |
| HpyCH4IV | ACGT | 1 cut(s) | 1014 |
| HpyF3I | CTNAG | 7 cut(s) | 329, 452, 1244, 1343, 1358, 1478, 2165 |
| HpySE526I | ACGT | 1 cut(s) | 1014 |
| Hsp92I | GRCGYC | 1 cut(s) | 2024 |
| Hsp92II | CATG | 8 cut(s) | 116, 260, 496, 699, 1121, 1148, 2135, 2262 |
| HspAI | GCGC | 2 cut(s) | 323, 1270 |
| Ksp22I | TGATCA | 4 cut(s) | 109, 679, 871, 1114 |
| LmnI | GCTCC | 3 cut(s) | 703, 1540, 2056 |
| Lsp1109I | GCAGC | 7 cut(s) | 141, 870, 1146, 1554, 1816, 2138, 2265 |
| LweI | GCATC | 2 cut(s) | 1850, 2271 |
| MabI | ACCWGGT | 2 cut(s) | 285, 1314 |
| MaeI | CTAG | 3 cut(s) | 299, 1295, 1578 |
| MaeII | ACGT | 1 cut(s) | 1014 |
| MaeIII | GTNAC | 7 cut(s) | 202, 884, 1100, 1346, 1502, 1901, 2142 |
| MflI | RGATCY | 1 cut(s) | 982 |
| MhlI | GDGCHC | 2 cut(s) | 1012, 1233 |
| MlsI | TGGCCA | 1 cut(s) | 1668 |
| MluNI | TGGCCA | 1 cut(s) | 1668 |
| MlyI | GAGTC | 4 cut(s) | 50, 668, 1354, 1946 |
| MmeI | TCCRAC | 3 cut(s) | 997, 2116, 2150 |
| Mox20I | TGGCCA | 1 cut(s) | 1668 |
| Mph1103I | ATGCAT | 3 cut(s) | 511, 1525, 2264 |
| MscI | TGGCCA | 1 cut(s) | 1668 |
| MslI | CAYNNNNRTG | 1 cut(s) | 998 |
| Msp20I | TGGCCA | 1 cut(s) | 1668 |
| MspCI | CTTAAG | 2 cut(s) | 842, 1859 |
| MspR9I | CCNGG | 2 cut(s) | 287, 1316 |
| MvaI | CCWGG | 2 cut(s) | 287, 1316 |
| MvnI | CGCG | 3 cut(s) | 323, 598, 1612 |
| NdeI | CATATG | 1 cut(s) | 1525 |
| NlaIII | CATG | 8 cut(s) | 116, 260, 496, 699, 1121, 1148, 2135, 2262 |
| NlaIV | GGNNCC | 1 cut(s) | 2159 |
| NmuCI | GTSAC | 6 cut(s) | 202, 884, 1346, 1502, 1901, 2142 |
| NsbI | TGCGCA | 1 cut(s) | 1271 |
| NsiI | ATGCAT | 3 cut(s) | 511, 1525, 2264 |
| NspI | RCATGY | 1 cut(s) | 496 |
| NspV | TTCGAA | 1 cut(s) | 1512 |
| OliI | CACNNNNGTG | 1 cut(s) | 998 |
| PagI | TCATGA | 2 cut(s) | 256, 1144 |
| PaqCI | CACCTGC | 1 cut(s) | 2155 |
| PciI | ACATGT | 1 cut(s) | 492 |
| PfeI | GAWTC | 2 cut(s) | 1184, 1406 |
| PkrI | GCNGC | 8 cut(s) | 9, 131, 860, 1136, 1569, 1831, 2128, 2255 |
| PleI | GAGTC | 4 cut(s) | 49, 667, 1353, 1946 |
| PpsI | GAGTC | 4 cut(s) | 49, 667, 1353, 1946 |
| PscI | ACATGT | 1 cut(s) | 492 |
| PshBI | ATTAAT | 1 cut(s) | 1323 |
| Psp6I | CCWGG | 2 cut(s) | 285, 1314 |
| PspFI | CCCAGC | 1 cut(s) | 1004 |
| PspGI | CCWGG | 2 cut(s) | 285, 1314 |
| PspN4I | GGNNCC | 1 cut(s) | 2159 |
| PspPI | GGNCC | 4 cut(s) | 456, 468, 1396, 1470 |
| PstI | CTGCAG | 1 cut(s) | 2255 |
| PstNI | CAGNNNCTG | 1 cut(s) | 943 |
| PsuI | RGATCY | 1 cut(s) | 982 |
| RsaI | GTAC | 4 cut(s) | 291, 575, 726, 1589 |
| RsaNI | GTAC | 4 cut(s) | 290, 574, 725, 1588 |
| RseI | CAYNNNNRTG | 1 cut(s) | 998 |
| SatI | GCNGC | 8 cut(s) | 8, 130, 859, 1135, 1568, 1830, 2127, 2254 |
| Sau96I | GGNCC | 4 cut(s) | 456, 468, 1396, 1470 |
| ScaI | AGTACT | 3 cut(s) | 575, 726, 1589 |
| SchI | GAGTC | 4 cut(s) | 50, 668, 1354, 1946 |
| ScrFI | CCNGG | 2 cut(s) | 287, 1316 |
| SduI | GDGCHC | 2 cut(s) | 1012, 1233 |
| SexAI | ACCWGGT | 2 cut(s) | 285, 1314 |
| SfaNI | GCATC | 2 cut(s) | 1850, 2271 |
| SfcI | CTRYAG | 1 cut(s) | 2251 |
| SfuI | TTCGAA | 1 cut(s) | 1512 |
| SinI | GGWCC | 1 cut(s) | 1396 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 998 |
| SmlI | CTYRAG | 3 cut(s) | 514, 842, 1859 |
| SmoI | CTYRAG | 3 cut(s) | 514, 842, 1859 |
| SsiI | CCGC | 4 cut(s) | 7, 54, 2054, 2093 |
| SspI | AATATT | 1 cut(s) | 1960 |
| SspMI | CTAG | 3 cut(s) | 299, 1295, 1578 |
| StyD4I | CCNGG | 2 cut(s) | 285, 1314 |
| TaaI | ACNGT | 5 cut(s) | 667, 773, 1214, 1265, 1426 |
| TaiI | ACGT | 1 cut(s) | 1017 |
| TaqI | TCGA | 7 cut(s) | 526, 558, 989, 1512, 1540, 1572, 1914 |
| TaqII | GACCGA | 1 cut(s) | 1583 |
| TatI | WGTACW | 3 cut(s) | 573, 724, 1587 |
| TauI | GCSGC | 1 cut(s) | 10 |
| TfiI | GAWTC | 2 cut(s) | 1184, 1406 |
| TscAI | CASTG | 6 cut(s) | 337, 778, 831, 1366, 1431, 1507 |
| TseFI | GTSAC | 6 cut(s) | 202, 884, 1346, 1502, 1901, 2142 |
| TseI | GCWGC | 7 cut(s) | 129, 858, 1134, 1567, 1829, 2126, 2253 |
| Tsp45I | GTSAC | 6 cut(s) | 202, 884, 1346, 1502, 1901, 2142 |
| TspGWI | ACGGA | 4 cut(s) | 256, 716, 1807, 2177 |
| TspRI | CASTG | 6 cut(s) | 337, 778, 831, 1366, 1431, 1507 |
| Vha464I | CTTAAG | 2 cut(s) | 842, 1859 |
| VpaK11BI | GGWCC | 1 cut(s) | 1396 |
| VspI | ATTAAT | 1 cut(s) | 1323 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 463 |
| XapI | RAATTY | 4 cut(s) | 501, 1515, 2015, 2047 |
| XbaI | TCTAGA | 1 cut(s) | 298 |
| XceI | RCATGY | 1 cut(s) | 496 |
| XmiI | GTMKAC | 1 cut(s) | 662 |
| XspI | CTAG | 3 cut(s) | 299, 1295, 1578 |
| ZrmI | AGTACT | 3 cut(s) | 575, 726, 1589 |
| Zsp2I | ATGCAT | 3 cut(s) | 511, 1525, 2264 |