RNA polymerase II C-terminal domain phosphatase-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g02680 FvH4_4g35032 FvH4_6g12031 |
| rosa_chinensis | RchiOBHm_Chr3g0463881 |
| rosa_laevigata | RLG00000024739 RLG00000024742 RLG00000024745 RLG00000024748 |
| rosa_multiflora | Rmu_co8025626.1_g000001 Rmu_co8196170.1_g000001 Rmu_sc0000517.1_g000007 Rmu_sc0004796.1_g000001 Rmu_sc0042095.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00416210 |
| rosa_rugosa | Rorug03G0068800 Rorug03G0068900 |
| rosa_samantha | Rh3AG125800 Rh3BG129900 Rh3CG132400 Rh3DG131000 Rh3DG131100 |
| rosa_wichuraiana | Rw3G010620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 393 |
| Acc36I | ACCTGC | 1 cut(s) | 393 |
| AclWI | GGATC | 1 cut(s) | 331 |
| AcuI | CTGAAG | 1 cut(s) | 196 |
| AcyI | GRCGYC | 2 cut(s) | 207, 262 |
| AflII | CTTAAG | 1 cut(s) | 101 |
| AflIII | ACRYGT | 1 cut(s) | 369 |
| AgsI | TTSAA | 1 cut(s) | 55 |
| AluBI | AGCT | 1 cut(s) | 310 |
| AluI | AGCT | 1 cut(s) | 310 |
| AlwI | GGATC | 1 cut(s) | 331 |
| ApeKI | GCWGC | 3 cut(s) | 22, 71, 364 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 137, 169 |
| AsuHPI | GGTGA | 1 cut(s) | 374 |
| BbvI | GCAGC | 3 cut(s) | 9, 58, 376 |
| BccI | CCATC | 2 cut(s) | 282, 348 |
| BfrI | CTTAAG | 1 cut(s) | 101 |
| BfuAI | ACCTGC | 1 cut(s) | 393 |
| BisI | GCNGC | 3 cut(s) | 23, 72, 365 |
| BlsI | GCNGC | 3 cut(s) | 24, 73, 366 |
| BmiI | GGNNCC | 1 cut(s) | 397 |
| BmsI | GCATC | 1 cut(s) | 92 |
| BsaHI | GRCGYC | 2 cut(s) | 207, 262 |
| BseGI | GGATG | 1 cut(s) | 339 |
| BseXI | GCAGC | 3 cut(s) | 9, 58, 376 |
| BslFI | GGGAC | 2 cut(s) | 25, 206 |
| BsmFI | GGGAC | 2 cut(s) | 25, 206 |
| Bsp143I | GATC | 1 cut(s) | 336 |
| BspLI | GGNNCC | 1 cut(s) | 397 |
| BspMI | ACCTGC | 1 cut(s) | 393 |
| BspPI | GGATC | 1 cut(s) | 331 |
| BspTI | CTTAAG | 1 cut(s) | 101 |
| BssMI | GATC | 1 cut(s) | 336 |
| BssNI | GRCGYC | 2 cut(s) | 207, 262 |
| Bst6I | CTCTTC | 1 cut(s) | 93 |
| BstACI | GRCGYC | 2 cut(s) | 207, 262 |
| BstAFI | CTTAAG | 1 cut(s) | 101 |
| BstF5I | GGATG | 1 cut(s) | 339 |
| BstKTI | GATC | 1 cut(s) | 339 |
| BstMBI | GATC | 1 cut(s) | 336 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 31, 80, 364 |
| BstNSI | RCATGY | 1 cut(s) | 373 |
| BstV1I | GCAGC | 3 cut(s) | 9, 58, 376 |
| BtsCI | GGATG | 1 cut(s) | 339 |
| BveI | ACCTGC | 1 cut(s) | 393 |
| CseI | GACGC | 2 cut(s) | 215, 251 |
| CviAII | CATG | 1 cut(s) | 370 |
| CviJI | RGCY | 3 cut(s) | 22, 71, 310 |
| CviKI_1 | RGCY | 3 cut(s) | 22, 71, 310 |
| DpnI | GATC | 1 cut(s) | 338 |
| DpnII | GATC | 1 cut(s) | 336 |
| Eam1104I | CTCTTC | 1 cut(s) | 93 |
| EarI | CTCTTC | 1 cut(s) | 93 |
| Eco57I | CTGAAG | 1 cut(s) | 196 |
| FaeI | CATG | 1 cut(s) | 373 |
| FaiI | YATR | 4 cut(s) | 36, 60, 244, 371 |
| FaqI | GGGAC | 2 cut(s) | 25, 206 |
| FatI | CATG | 1 cut(s) | 369 |
| Fnu4HI | GCNGC | 3 cut(s) | 23, 72, 365 |
| FokI | GGATG | 1 cut(s) | 346 |
| Fsp4HI | GCNGC | 3 cut(s) | 23, 72, 365 |
| GluI | GCNGC | 3 cut(s) | 23, 72, 365 |
| HgaI | GACGC | 2 cut(s) | 215, 251 |
| Hin1I | GRCGYC | 2 cut(s) | 207, 262 |
| Hin1II | CATG | 1 cut(s) | 373 |
| HinfI | GANTC | 1 cut(s) | 194 |
| HphI | GGTGA | 1 cut(s) | 374 |
| Hpy188I | TCNGA | 1 cut(s) | 404 |
| Hpy188III | TCNNGA | 1 cut(s) | 305 |
| HpyAV | CCTTC | 2 cut(s) | 219, 220 |
| HpyCH4V | TGCA | 3 cut(s) | 34, 83, 358 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 31, 80, 364 |
| Hsp92I | GRCGYC | 2 cut(s) | 207, 262 |
| Hsp92II | CATG | 1 cut(s) | 373 |
| Kzo9I | GATC | 1 cut(s) | 336 |
| LpnPI | CCDG | 4 cut(s) | 53, 103, 318, 398 |
| Lsp1109I | GCAGC | 3 cut(s) | 9, 58, 376 |
| LweI | GCATC | 1 cut(s) | 92 |
| MaeIII | GTNAC | 3 cut(s) | 143, 263, 380 |
| MalI | GATC | 1 cut(s) | 338 |
| MboI | GATC | 1 cut(s) | 336 |
| MboII | GAAGA | 3 cut(s) | 80, 294, 297 |
| MluCI | AATT | 2 cut(s) | 183, 237 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MmeI | TCCRAC | 1 cut(s) | 354 |
| MnlI | CCTC | 4 cut(s) | 162, 215, 315, 345 |
| MseI | TTAA | 5 cut(s) | 93, 102, 126, 179, 269 |
| MspCI | CTTAAG | 1 cut(s) | 101 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 31, 80, 364 |
| NdeII | GATC | 1 cut(s) | 336 |
| NlaIII | CATG | 1 cut(s) | 373 |
| NlaIV | GGNNCC | 1 cut(s) | 397 |
| NmuCI | GTSAC | 3 cut(s) | 143, 263, 380 |
| NspI | RCATGY | 1 cut(s) | 373 |
| PaqCI | CACCTGC | 1 cut(s) | 393 |
| PciI | ACATGT | 1 cut(s) | 369 |
| PkrI | GCNGC | 3 cut(s) | 24, 73, 366 |
| PleI | GAGTC | 1 cut(s) | 188 |
| PpsI | GAGTC | 1 cut(s) | 188 |
| PscI | ACATGT | 1 cut(s) | 369 |
| PspN4I | GGNNCC | 1 cut(s) | 397 |
| SaqAI | TTAA | 5 cut(s) | 93, 102, 126, 179, 269 |
| SatI | GCNGC | 3 cut(s) | 23, 72, 365 |
| Sau3AI | GATC | 1 cut(s) | 336 |
| SchI | GAGTC | 1 cut(s) | 188 |
| SetI | ASST | 5 cut(s) | 122, 153, 312, 356, 387 |
| SfaNI | GCATC | 1 cut(s) | 92 |
| SmlI | CTYRAG | 1 cut(s) | 101 |
| SmoI | CTYRAG | 1 cut(s) | 101 |
| Sse9I | AATT | 2 cut(s) | 183, 237 |
| SspI | AATATT | 1 cut(s) | 202 |
| TaqI | TCGA | 1 cut(s) | 156 |
| TasI | AATT | 2 cut(s) | 183, 237 |
| Tru1I | TTAA | 5 cut(s) | 93, 102, 126, 179, 269 |
| Tru9I | TTAA | 5 cut(s) | 93, 102, 126, 179, 269 |
| TseFI | GTSAC | 3 cut(s) | 143, 263, 380 |
| TseI | GCWGC | 3 cut(s) | 22, 71, 364 |
| Tsp45I | GTSAC | 3 cut(s) | 143, 263, 380 |
| TspDTI | ATGAA | 3 cut(s) | 29, 78, 147 |
| Vha464I | CTTAAG | 1 cut(s) | 101 |
| XceI | RCATGY | 1 cut(s) | 373 |