RLG00000028569

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
24465994 .. 24473718
7725 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028569

Sequence Viewer

Length: 1680 bp
ATGCAGCTCCAAAAAATCCCCAAGTCGCCGAGAAGCCCAGAGCTGCAAATCTCGCTCCTCTCTCTCTCGGAACACCACGGGAGGTTGTCATTGGAATCTGCGGAAATCGGGCTGATTTCGGGGTCTCTGAAGAGGATGGTGTTCGGAATTGCATTGATGGCCTGCTGGGGTACCAAGCGAGTCACTAAGGTCTTTTACGATTCCTTCACGAATCATTTGAAGGGCGTTGGTGGTCTTAATTTGGTGGAATACCTTGTTACAGCATCTAAGAACCCGATATTGTATGTCTTCTTCAGTTCCCCTAGACTCCAGGAAACTGTTGGGACCAGGGTTTTGACGCTAATACCAGGAGGACTAATTGAACTTCTTGTTGCCAAACAAGAAGCAGATCCTGAGGATTTAAGAGAAGGTCAGAAACGGATGATGGCATTGTTCCATGTTTATACTTTCGATGAGAATACTCCACTTGTTGATGATCCAGAGTACATCTTTGCATTAGGTGAAACAAAATTCAAGGGACTGCAAAGCGGAGATAAGTATGCGAAGAAAGAGATTGATCATGCCCCTGAAGTTATTGATGATCCTGATCTATATGCCCCTTTATTTCGAAATATGTCTGTTTTCAAAAGCTATGAGTTGATGGAATTGATACTTAAAGTTTACATTTACAATGATGGGTCAAGGGCCGGCCCATATTTCATGTTGATGGAGGGAAACAGGCAATTTGTCACAAGAGACGCAGAAAAGGCTCACTTATTTTATCTTCCTTACAGCATGCGCCAATTGGAGTTGAAGCTTTATGTACCTGGTTCACATCAAATTAAACCACTGGCAATATTCCTCAGAGACTATGTGAACATGATTGCTGGGAAGTATCCTTTCTGGAATCGCACACATGGGACAGATCATTTTCTTGTTGCTTGCCATGACTGGCACGAGGAATTGGCCAACAATACAATAAAAGCTCTATGCAACGCTGACACCTCAGAAGAAGTTTTTGTTGCTGGGAAGGATGTTTCACTGCCAGAAACTAATATTAGGAACCCCAGGGTTCCCCTTAGAAATATTGGTGGATTAAGAGTGTCACAGCGCCCACTCCTTGCCTTCTTTGCAGGACGCATGCATGGCAGAGTCCGCCCAATATTTCTCAAGTACTGGCGGGACAAACATGAGGACATGAAAATCTATGGGCCTCTGCCTTCTAGAATCTCCCGAAAGATGTCATATATCCAGCATATGAAGTCAAGTAAATTTTGTATTTGCCCAATGGGGTATGAAGTGAACAGCCCCAGGATCATTGAAGCCATATATTATGAGTGTGTCCCAGTGATAATTGCAGATAATTTCCCCCCTCCTTTGAGCGACGTGCTAGACTGGAGCAAATTTTCTGTTATTGTGGCTGAGAAGGATATCCCTAAGTTACGAGAGATTTTATTGGCTATTTCTATGAGAAGATACATGGCTATGCAAACAAATGTGAAACTGGACTTCAACGAGCATTGGGTGCCTGCAACAGTTGTTTCATGCAAATCTAATATAAAGAGCATAAAGGTGAGGCTAGGGGCGATTAAGAAGAAGAGGAACGCTGTGCTGAAGTATCTGAAGAATAATGTTGCTGTTCTTCTCAAGATTGGCCTTGATATTAATGTATATGGAGGGTTAAGTTTCATGGCTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

560

Amino Acids

63.88

Weight (kDa)

9.23

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 238 - 478 2.3e-55 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 170
AccB1I GGYRCC 2 cut(s) 170, 1504
AciI CCGC 4 cut(s) 101, 528, 1135, 1159
AclWI GGATC 4 cut(s) 383, 470, 575, 1301
AcoI YGGCCR 1 cut(s) 945
AcsI RAATTY 3 cut(s) 509, 1250, 1382
AcuI CTGAAG 5 cut(s) 149, 277, 588, 1613, 1622
AfaI GTAC 4 cut(s) 172, 485, 804, 1154
AgsI TTSAA 7 cut(s) 220, 362, 514, 625, 793, 1301, 1492
AjiI CACGTC 1 cut(s) 1366
AjnI CCWGG 6 cut(s) 309, 326, 346, 805, 1046, 1289
AluBI AGCT 5 cut(s) 7, 43, 630, 796, 965
AluI AGCT 5 cut(s) 7, 43, 630, 796, 965
Alw26I GTCTC 3 cut(s) 129, 729, 840
AlwI GGATC 4 cut(s) 383, 470, 575, 1301
AlwNI CAGNNNCTG 1 cut(s) 392
AoxI GGCC 6 cut(s) 159, 684, 688, 945, 1190, 1633
ApeKI GCWGC 2 cut(s) 4, 43
ApoI RAATTY 3 cut(s) 509, 1250, 1382
ArsI GACNNNNNNTTYG 2 cut(s) 316, 348
AseI ATTAAT 1 cut(s) 1644
Asp718I GGTACC 1 cut(s) 170
AspLEI GCGC 2 cut(s) 780, 1092
AspS9I GGNCC 4 cut(s) 324, 684, 689, 1190
AsuHPI GGTGA 2 cut(s) 512, 1564
AsuII TTCGAA 1 cut(s) 607
AvaII GGWCC 1 cut(s) 324
AxyI CCTNAGG 1 cut(s) 393
BalI TGGCCA 1 cut(s) 947
BanI GGYRCC 2 cut(s) 170, 1504
BarI GAAGNNNNNNTAC 2 cut(s) 275, 307
BauI CACGAG 1 cut(s) 935
BbsI GAAGAC 1 cut(s) 280
BbvI GCAGC 2 cut(s) 16, 30
BccI CCATC 6 cut(s) 130, 151, 418, 634, 668, 700
BciT130I CCWGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
BciVI GTATCC 1 cut(s) 885
BclI TGATCA 1 cut(s) 556
BcoDI GTCTC 3 cut(s) 129, 729, 840
BfaI CTAG 4 cut(s) 303, 1203, 1370, 1559
BfoI RGCGCY 1 cut(s) 1093
BfuI GTATCC 1 cut(s) 885
BisI GCNGC 2 cut(s) 5, 44
BlsI GCNGC 2 cut(s) 6, 45
BmcAI AGTACT 1 cut(s) 1154
Bme1390I CCNGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
Bme18I GGWCC 1 cut(s) 324
BmgBI CACGTC 1 cut(s) 1366
BmgT120I GGNCC 4 cut(s) 324, 684, 689, 1190
BmiI GGNNCC 5 cut(s) 172, 325, 1043, 1053, 1506
BmrFI CCNGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
BmrI ACTGGG 1 cut(s) 1319
BmsI GCATC 1 cut(s) 272
BmuI ACTGGG 1 cut(s) 1319
BpiI GAAGAC 1 cut(s) 280
BpmI CTGGAG 2 cut(s) 293, 1396
Bpu14I TTCGAA 1 cut(s) 607
BpuEI CTTGAG 2 cut(s) 1133, 1610
BsaBI GATNNNNATC 1 cut(s) 585
BsaI GGTCTC 1 cut(s) 129
BsaJI CCNNGG 5 cut(s) 76, 327, 1046, 1047, 1289
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 6 cut(s) 834, 935, 1160, 1325, 1379, 1488
Bse21I CCTNAGG 1 cut(s) 393
Bse8I GATNNNNATC 1 cut(s) 585
BseBI CCWGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
BseDI CCNNGG 5 cut(s) 76, 327, 1046, 1047, 1289
BseGI GGATG 3 cut(s) 141, 426, 1018
BseJI GATNNNNATC 1 cut(s) 585
BseMII CTCAG 4 cut(s) 384, 856, 999, 1392
BseNI ACTGG 6 cut(s) 834, 935, 1160, 1325, 1379, 1488
BseRI GAGGAG 1 cut(s) 47
BseXI GCAGC 2 cut(s) 16, 30
BseYI CCCAGC 3 cut(s) 165, 866, 1004
BshFI GGCC 6 cut(s) 161, 686, 690, 947, 1192, 1635
BshNI GGYRCC 2 cut(s) 170, 1504
BsiSI CCGG 1 cut(s) 687
BslFI GGGAC 5 cut(s) 337, 531, 913, 1175, 1307
BsmAI GTCTC 3 cut(s) 129, 729, 840
BsmBI CGTCTC 1 cut(s) 729
BsmFI GGGAC 5 cut(s) 337, 531, 913, 1175, 1307
BsnI GGCC 6 cut(s) 161, 686, 690, 947, 1192, 1635
Bso31I GGTCTC 1 cut(s) 129
Bsp119I TTCGAA 1 cut(s) 607
Bsp143I GATC 7 cut(s) 388, 475, 556, 580, 586, 904, 1293
BspACI CCGC 4 cut(s) 101, 528, 1135, 1159
BspANI GGCC 6 cut(s) 161, 686, 690, 947, 1192, 1635
BspCNI CTCAG 4 cut(s) 385, 855, 998, 1393
BspLI GGNNCC 5 cut(s) 172, 325, 1043, 1053, 1506
BspPI GGATC 4 cut(s) 383, 470, 575, 1301
BspT104I TTCGAA 1 cut(s) 607
BspT107I GGYRCC 2 cut(s) 170, 1504
BspTNI GGTCTC 1 cut(s) 129
BsrFI RCCGGY 1 cut(s) 686
BsrI ACTGG 6 cut(s) 834, 935, 1160, 1325, 1379, 1488
BssAI RCCGGY 1 cut(s) 686
BssECI CCNNGG 5 cut(s) 76, 327, 1046, 1047, 1289
BssMI GATC 7 cut(s) 388, 475, 556, 580, 586, 904, 1293
BssSI CACGAG 1 cut(s) 935
Bst2BI CACGAG 1 cut(s) 935
Bst2UI CCWGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
Bst4CI ACNGT 2 cut(s) 319, 1516
Bst6I CTCTTC 2 cut(s) 125, 1571
BstAPI GCANNNNNTGC 1 cut(s) 1504
BstBI TTCGAA 1 cut(s) 607
BstC8I GCNNGC 6 cut(s) 163, 688, 776, 922, 1121, 1509
BstDEI CTNAG 8 cut(s) 186, 267, 393, 842, 985, 1058, 1401, 1416
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 3 cut(s) 141, 426, 1018
BstH2I RGCGCY 1 cut(s) 1093
BstHHI GCGC 2 cut(s) 780, 1092
BstKTI GATC 7 cut(s) 391, 478, 559, 583, 589, 907, 1296
BstMAI GTCTC 3 cut(s) 129, 729, 840
BstMBI GATC 7 cut(s) 388, 475, 556, 580, 586, 904, 1293
BstMWI GCNNNNNNNGC 7 cut(s) 52, 158, 746, 1109, 1125, 1134, 1504
BstNI CCWGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
BstNSI RCATGY 2 cut(s) 778, 1123
BstSCI CCNGG 6 cut(s) 309, 326, 346, 805, 1046, 1289
BstV1I GCAGC 2 cut(s) 16, 30
BstV2I GAAGAC 1 cut(s) 280
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
Bsu36I CCTNAGG 1 cut(s) 393
BsuI GTATCC 1 cut(s) 885
BsuRI GGCC 6 cut(s) 161, 686, 690, 947, 1192, 1635
BtgI CCRYGG 1 cut(s) 76
BtrI CACGTC 1 cut(s) 1366
BtsCI GGATG 3 cut(s) 141, 426, 1018
BtsI GCAGTG 1 cut(s) 1019
BtsIMutI CAGTG 3 cut(s) 827, 1019, 1332
Cac8I GCNNGC 6 cut(s) 163, 688, 776, 922, 1121, 1509
CaiI CAGNNNCTG 1 cut(s) 392
CfoI GCGC 2 cut(s) 780, 1092
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 4 cut(s) 324, 684, 689, 1190
CseI GACGC 3 cut(s) 346, 746, 1125
CsiI ACCWGGT 1 cut(s) 805
Csp6I GTAC 4 cut(s) 171, 484, 803, 1153
CviQI GTAC 4 cut(s) 171, 484, 803, 1153
DdeI CTNAG 8 cut(s) 186, 267, 393, 842, 985, 1058, 1401, 1416
DpnI GATC 7 cut(s) 390, 477, 558, 582, 588, 906, 1295
DpnII GATC 7 cut(s) 388, 475, 556, 580, 586, 904, 1293
EaeI YGGCCR 1 cut(s) 945
Eam1104I CTCTTC 2 cut(s) 125, 1571
EarI CTCTTC 2 cut(s) 125, 1571
EciI GGCGGA 1 cut(s) 1124
Eco31I GGTCTC 1 cut(s) 129
Eco32I GATATC 1 cut(s) 1411
Eco47I GGWCC 1 cut(s) 324
Eco57I CTGAAG 5 cut(s) 149, 277, 588, 1613, 1622
Eco81I CCTNAGG 1 cut(s) 393
EcoRII CCWGG 6 cut(s) 309, 326, 346, 805, 1046, 1289
EcoRV GATATC 1 cut(s) 1411
EcoT22I ATGCAT 1 cut(s) 1125
Esp3I CGTCTC 1 cut(s) 729
FalI AAGNNNNNCTT 2 cut(s) 737, 769
FaqI GGGAC 5 cut(s) 337, 531, 913, 1175, 1307
FauI CCCGC 1 cut(s) 1152
FauNDI CATATG 1 cut(s) 1236
FbaI TGATCA 1 cut(s) 556
Fnu4HI GCNGC 2 cut(s) 5, 44
FokI GGATG 3 cut(s) 148, 433, 1025
FseI GGCCGGCC 1 cut(s) 690
Fsp4HI GCNGC 2 cut(s) 5, 44
FspBI CTAG 4 cut(s) 303, 1203, 1370, 1559
GlaI GCGC 2 cut(s) 779, 1091
GluI GCNGC 2 cut(s) 5, 44
GsaI CCCAGC 3 cut(s) 169, 870, 1008
GsuI CTGGAG 2 cut(s) 293, 1396
HaeII RGCGCY 1 cut(s) 1093
HaeIII GGCC 6 cut(s) 161, 686, 690, 947, 1192, 1635
HapII CCGG 1 cut(s) 687
HgaI GACGC 3 cut(s) 346, 746, 1125
HhaI GCGC 2 cut(s) 780, 1092
Hin6I GCGC 2 cut(s) 778, 1090
HinP1I GCGC 2 cut(s) 778, 1090
HindIII AAGCTT 1 cut(s) 794
HinfI GANTC 8 cut(s) 95, 180, 200, 211, 306, 886, 1131, 1206
HpaII CCGG 1 cut(s) 687
HphI GGTGA 2 cut(s) 512, 1564
Hpy166II GTNNAC 4 cut(s) 661, 812, 856, 1282
Hpy188I TCNGA 7 cut(s) 70, 129, 146, 414, 845, 988, 1602
Hpy188III TCNNGA 8 cut(s) 208, 392, 479, 584, 883, 1203, 1212, 1627
Hpy8I GTNNAC 4 cut(s) 661, 812, 856, 1282
Hpy99I CGWCG 1 cut(s) 1367
HpyAV CCTTC 7 cut(s) 214, 214, 401, 1003, 1114, 1209, 1399
HpyCH4III ACNGT 2 cut(s) 319, 1516
HpyCH4IV ACGT 1 cut(s) 1365
HpyF10VI GCNNNNNNNGC 7 cut(s) 52, 158, 746, 1109, 1125, 1134, 1504
HpyF3I CTNAG 8 cut(s) 186, 267, 393, 842, 985, 1058, 1401, 1416
HpySE526I ACGT 1 cut(s) 1365
HspAI GCGC 2 cut(s) 778, 1090
KpnI GGTACC 1 cut(s) 174
KroI GCCGGC 1 cut(s) 686
KroNI GCCGGC 1 cut(s) 688
Ksp22I TGATCA 1 cut(s) 556
Kzo9I GATC 7 cut(s) 388, 475, 556, 580, 586, 904, 1293
LmnI GCTCC 3 cut(s) 12, 60, 1377
Lsp1109I GCAGC 2 cut(s) 16, 30
LweI GCATC 1 cut(s) 272
MabI ACCWGGT 1 cut(s) 805
MaeI CTAG 4 cut(s) 303, 1203, 1370, 1559
MaeII ACGT 1 cut(s) 1365
MaeIII GTNAC 5 cut(s) 181, 256, 727, 1083, 1419
MalI GATC 7 cut(s) 390, 477, 558, 582, 588, 906, 1295
MboI GATC 7 cut(s) 388, 475, 556, 580, 586, 904, 1293
MfeI CAATTG 1 cut(s) 782
MflI RGATCY 1 cut(s) 388
MlsI TGGCCA 1 cut(s) 947
MluNI TGGCCA 1 cut(s) 947
MlyI GAGTC 3 cut(s) 189, 300, 1140
Mox20I TGGCCA 1 cut(s) 947
Mph1103I ATGCAT 1 cut(s) 1125
MroNI GCCGGC 1 cut(s) 686
MscI TGGCCA 1 cut(s) 947
MseI TTAA 8 cut(s) 237, 401, 654, 822, 1076, 1569, 1644, 1661
MslI CAYNNNNRTG 3 cut(s) 704, 1463, 1550
Msp20I TGGCCA 1 cut(s) 947
MspI CCGG 1 cut(s) 687
MspR9I CCNGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
MunI CAATTG 1 cut(s) 782
MvaI CCWGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
MwoI GCNNNNNNNGC 7 cut(s) 52, 158, 746, 1109, 1125, 1134, 1504
NaeI GCCGGC 1 cut(s) 688
NdeI CATATG 1 cut(s) 1236
NdeII GATC 7 cut(s) 388, 475, 556, 580, 586, 904, 1293
NgoMIV GCCGGC 1 cut(s) 686
NlaIV GGNNCC 5 cut(s) 172, 325, 1043, 1053, 1506
NmeAIII GCCGAG 1 cut(s) 54
NmuCI GTSAC 3 cut(s) 181, 727, 1083
NsiI ATGCAT 1 cut(s) 1125
NspI RCATGY 2 cut(s) 778, 1123
NspV TTCGAA 1 cut(s) 607
PaeI GCATGC 2 cut(s) 778, 1123
PasI CCCWGGG 1 cut(s) 1047
PdiI GCCGGC 1 cut(s) 688
PfeI GAWTC 5 cut(s) 95, 200, 211, 886, 1206
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 2 cut(s) 6, 45
PleI GAGTC 3 cut(s) 188, 300, 1139
PpsI GAGTC 3 cut(s) 188, 300, 1139
PshBI ATTAAT 1 cut(s) 1644
Psp6I CCWGG 6 cut(s) 309, 326, 346, 805, 1046, 1289
PspFI CCCAGC 3 cut(s) 165, 866, 1004
PspGI CCWGG 6 cut(s) 309, 326, 346, 805, 1046, 1289
PspN4I GGNNCC 5 cut(s) 172, 325, 1043, 1053, 1506
PspPI GGNCC 4 cut(s) 324, 684, 689, 1190
PstNI CAGNNNCTG 1 cut(s) 392
PsuI RGATCY 1 cut(s) 388
RigI GGCCGGCC 1 cut(s) 690
RsaI GTAC 4 cut(s) 172, 485, 804, 1154
RsaNI GTAC 4 cut(s) 171, 484, 803, 1153
RseI CAYNNNNRTG 3 cut(s) 704, 1463, 1550
SaqAI TTAA 8 cut(s) 237, 401, 654, 822, 1076, 1569, 1644, 1661
SatI GCNGC 2 cut(s) 5, 44
Sau3AI GATC 7 cut(s) 388, 475, 556, 580, 586, 904, 1293
Sau96I GGNCC 4 cut(s) 324, 684, 689, 1190
ScaI AGTACT 1 cut(s) 1154
SchI GAGTC 3 cut(s) 189, 300, 1140
ScrFI CCNGG 6 cut(s) 311, 328, 348, 807, 1048, 1291
SexAI ACCWGGT 1 cut(s) 805
SfaNI GCATC 1 cut(s) 272
SfuI TTCGAA 1 cut(s) 607
SinI GGWCC 1 cut(s) 324
SmiMI CAYNNNNRTG 3 cut(s) 704, 1463, 1550
SmlI CTYRAG 2 cut(s) 1148, 1625
SmoI CTYRAG 2 cut(s) 1148, 1625
SphI GCATGC 2 cut(s) 778, 1123
SsiI CCGC 4 cut(s) 101, 528, 1135, 1159
SspI AATATT 4 cut(s) 837, 1036, 1066, 1143
SspMI CTAG 4 cut(s) 303, 1203, 1370, 1559
StyD4I CCNGG 6 cut(s) 309, 326, 346, 805, 1046, 1289
TaaI ACNGT 2 cut(s) 319, 1516
TaiI ACGT 1 cut(s) 1368
TaqI TCGA 2 cut(s) 450, 607
TatI WGTACW 2 cut(s) 483, 1152
TfiI GAWTC 5 cut(s) 95, 200, 211, 886, 1206
Tru1I TTAA 8 cut(s) 237, 401, 654, 822, 1076, 1569, 1644, 1661
Tru9I TTAA 8 cut(s) 237, 401, 654, 822, 1076, 1569, 1644, 1661
TscAI CASTG 3 cut(s) 834, 1026, 1332
TseFI GTSAC 3 cut(s) 181, 727, 1083
TseI GCWGC 2 cut(s) 4, 43
Tsp45I GTSAC 3 cut(s) 181, 727, 1083
TspDTI ATGAA 6 cut(s) 688, 1193, 1253, 1290, 1512, 1657
TspGWI ACGGA 1 cut(s) 433
TspRI CASTG 3 cut(s) 834, 1026, 1332
VpaK11BI GGWCC 1 cut(s) 324
VspI ATTAAT 1 cut(s) 1644
XapI RAATTY 3 cut(s) 509, 1250, 1382
XbaI TCTAGA 1 cut(s) 1202
XceI RCATGY 2 cut(s) 778, 1123
XcmI CCANNNNNNNNNTGG 1 cut(s) 317
XspI CTAG 4 cut(s) 303, 1203, 1370, 1559
ZrmI AGTACT 1 cut(s) 1154
Zsp2I ATGCAT 1 cut(s) 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.