Rmu_co8265539.1_g000001

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8265539.1
Physical Location & Seq
Reverse (-)
1 .. 650
650 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8265539.1_g000001.1.cds

Sequence Viewer

Length: 260 bp
atgccatatattggcacagttcctacagggagatcaagaaggagaaagaaaggtggaaatgtagataacatgtcaaaggtcatacctcctcctgaccctccacgtatacatgtgccttatcgtttgcagaaattcatttggtccttgacacccaatgaggcacttgtgtatgcgaagaaagagattgatcatgcccctgaagttattgacgatcctgatctatatgcccctttatttcgaaatatgtctgttttcaaaag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

86

Amino Acids

9.89

Weight (kDa)

9.75

Isoelectric Point (pI)

65.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 11
AccI GTMKAC 1 cut(s) 106
AclWI GGATC 1 cut(s) 206
AcsI RAATTY 1 cut(s) 131
AcuI CTGAAG 1 cut(s) 219
AfiI CCNNNNNNNGG 1 cut(s) 11
AflIII ACRYGT 2 cut(s) 69, 109
AgsI TTSAA 1 cut(s) 256
AlwI GGATC 1 cut(s) 206
ApoI RAATTY 1 cut(s) 131
AspS9I GGNCC 1 cut(s) 141
AsuII TTCGAA 1 cut(s) 238
AvaII GGWCC 1 cut(s) 141
BclI TGATCA 1 cut(s) 187
BfmI CTRYAG 1 cut(s) 24
Bme18I GGWCC 1 cut(s) 141
BmgT120I GGNCC 1 cut(s) 141
Bpu14I TTCGAA 1 cut(s) 238
BsaAI YACGTR 1 cut(s) 104
BsaBI GATNNNNATC 1 cut(s) 216
Bsc4I CCNNNNNNNGG 1 cut(s) 11
Bse8I GATNNNNATC 1 cut(s) 216
BseJI GATNNNNATC 1 cut(s) 216
BseLI CCNNNNNNNGG 1 cut(s) 11
BseRI GAGGAG 1 cut(s) 78
BslI CCNNNNNNNGG 1 cut(s) 11
Bsp119I TTCGAA 1 cut(s) 238
Bsp143I GATC 4 cut(s) 32, 187, 211, 217
BspPI GGATC 1 cut(s) 206
BspT104I TTCGAA 1 cut(s) 238
BssMI GATC 4 cut(s) 32, 187, 211, 217
BssNAI GTATAC 1 cut(s) 107
Bst1107I GTATAC 1 cut(s) 107
Bst4CI ACNGT 1 cut(s) 19
BstBAI YACGTR 1 cut(s) 104
BstBI TTCGAA 1 cut(s) 238
BstKTI GATC 4 cut(s) 35, 190, 214, 220
BstMBI GATC 4 cut(s) 32, 187, 211, 217
BstNSI RCATGY 2 cut(s) 73, 113
BstSFI CTRYAG 1 cut(s) 24
BstZ17I GTATAC 1 cut(s) 107
Cfr13I GGNCC 1 cut(s) 141
CviAII CATG 3 cut(s) 70, 110, 191
DpnI GATC 4 cut(s) 34, 189, 213, 219
DpnII GATC 4 cut(s) 32, 187, 211, 217
Eco47I GGWCC 1 cut(s) 141
Eco57I CTGAAG 1 cut(s) 219
FaeI CATG 3 cut(s) 73, 113, 194
FatI CATG 3 cut(s) 69, 109, 190
FbaI TGATCA 1 cut(s) 187
FblI GTMKAC 1 cut(s) 106
Hin1II CATG 3 cut(s) 73, 113, 194
Hpy166II GTNNAC 1 cut(s) 107
Hpy188III TCNNGA 3 cut(s) 36, 92, 215
Hpy8I GTNNAC 1 cut(s) 107
HpyAV CCTTC 1 cut(s) 33
HpyCH4III ACNGT 1 cut(s) 19
HpyCH4IV ACGT 1 cut(s) 103
HpyCH4V TGCA 1 cut(s) 127
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 3 cut(s) 73, 113, 194
Ksp22I TGATCA 1 cut(s) 187
Kzo9I GATC 4 cut(s) 32, 187, 211, 217
LpnPI CCDG 4 cut(s) 12, 105, 210, 228
MaeII ACGT 1 cut(s) 103
MalI GATC 4 cut(s) 34, 189, 213, 219
MboI GATC 4 cut(s) 32, 187, 211, 217
MboII GAAGA 1 cut(s) 187
MluCI AATT 1 cut(s) 131
MnlI CCTC 4 cut(s) 96, 99, 108, 151
NdeII GATC 4 cut(s) 32, 187, 211, 217
NlaIII CATG 3 cut(s) 73, 113, 194
NspI RCATGY 2 cut(s) 73, 113
NspV TTCGAA 1 cut(s) 238
PciI ACATGT 2 cut(s) 69, 109
PflMI CCANNNNNTGG 1 cut(s) 11
Ppu21I YACGTR 1 cut(s) 104
PscI ACATGT 2 cut(s) 69, 109
PspPI GGNCC 1 cut(s) 141
Sau3AI GATC 4 cut(s) 32, 187, 211, 217
Sau96I GGNCC 1 cut(s) 141
SetI ASST 4 cut(s) 55, 81, 88, 106
SfcI CTRYAG 1 cut(s) 24
SfuI TTCGAA 1 cut(s) 238
SinI GGWCC 1 cut(s) 141
Sse9I AATT 1 cut(s) 131
TaaI ACNGT 1 cut(s) 19
TaiI ACGT 1 cut(s) 106
TaqI TCGA 1 cut(s) 238
TasI AATT 1 cut(s) 131
TspDTI ATGAA 1 cut(s) 124
Van91I CCANNNNNTGG 1 cut(s) 11
VpaK11BI GGWCC 1 cut(s) 141
XapI RAATTY 1 cut(s) 131
XceI RCATGY 2 cut(s) 73, 113
XmiI GTMKAC 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.