Rorug07G0079100

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
6138026 .. 6140436
2411 bp
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UTR
Exon/CDS
Intron
Rorug07G0079100.1

Sequence Viewer

Length: 159 bp
ATGCTATCCAACTCTAGGGGTTCAGTTCGTATCATATTCCTGGTTACTGATGGGGCAGTTGAAGATGAGAGACAAATATGCGATGAAATAAAAAAGCATCTTGCAAGTGAGGATGCGATATCCCCTCGTATATACACTTTTGGAATAGTAGAAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

52

Amino Acids

5.79

Weight (kDa)

4.83

Isoelectric Point (pI)

33.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 15
AgsI TTSAA 1 cut(s) 62
AjnI CCWGG 1 cut(s) 39
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
Alw26I GTCTC 1 cut(s) 64
BccI CCATC 1 cut(s) 44
BciT130I CCWGG 1 cut(s) 41
BcoDI GTCTC 1 cut(s) 64
BfaI CTAG 1 cut(s) 15
Bme1390I CCNGG 1 cut(s) 41
BmrFI CCNGG 1 cut(s) 41
BmsI GCATC 2 cut(s) 103, 106
Bsc4I CCNNNNNNNGG 1 cut(s) 15
BseBI CCWGG 1 cut(s) 41
BseGI GGATG 1 cut(s) 118
BseLI CCNNNNNNNGG 1 cut(s) 15
BslI CCNNNNNNNGG 1 cut(s) 15
BsmAI GTCTC 1 cut(s) 64
Bst2UI CCWGG 1 cut(s) 41
BstF5I GGATG 1 cut(s) 118
BstMAI GTCTC 1 cut(s) 64
BstNI CCWGG 1 cut(s) 41
BstSCI CCNGG 1 cut(s) 39
BtgZI GCGATG 1 cut(s) 96
BtsCI GGATG 1 cut(s) 118
CviJI RGCY 1 cut(s) 155
CviKI_1 RGCY 1 cut(s) 155
Eco32I GATATC 1 cut(s) 120
EcoRII CCWGG 1 cut(s) 39
EcoRV GATATC 1 cut(s) 120
FaiI YATR 4 cut(s) 35, 79, 131, 133
FokI GGATG 1 cut(s) 125
FspBI CTAG 1 cut(s) 15
HindIII AAGCTT 1 cut(s) 153
HpyCH4V TGCA 1 cut(s) 104
LpnPI CCDG 2 cut(s) 26, 53
LweI GCATC 2 cut(s) 103, 106
MaeI CTAG 1 cut(s) 15
MaeIII GTNAC 1 cut(s) 43
MboII GAAGA 1 cut(s) 74
MmeI TCCRAC 1 cut(s) 33
MnlI CCTC 2 cut(s) 103, 135
MseI TTAA 1 cut(s) 157
MspR9I CCNGG 1 cut(s) 41
MvaI CCWGG 1 cut(s) 41
Psp6I CCWGG 1 cut(s) 39
PspGI CCWGG 1 cut(s) 39
SaqAI TTAA 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 41
SetI ASST 1 cut(s) 157
SfaNI GCATC 2 cut(s) 103, 106
SgeI CNNG 6 cut(s) 27, 52, 53, 113, 117, 138
SspMI CTAG 1 cut(s) 15
StyD4I CCNGG 1 cut(s) 39
Tru1I TTAA 1 cut(s) 157
Tru9I TTAA 1 cut(s) 157
TspDTI ATGAA 1 cut(s) 99
XspI CTAG 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.