Transcription elongation factor B polypeptide
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g13130 FvH4_7g07290 |
| rosa_chinensis | RchiOBHm_Chr1g0337481 RchiOBHm_Chr1g0337681 RchiOBHm_Chr1g0337771 RchiOBHm_Chr1g0340101 |
| rosa_laevigata | RLG00000029260 RLG00000029268 |
| rosa_multiflora | Rmu_sc0001215.1_g000003 Rmu_sc0002772.1_g000015 |
| rosa_roxburghii | Rroxscaffold_4G00313980 |
| rosa_rugosa | Rorug01G0135900.1 |
| rosa_samantha | Rh1AG154900 Rh1AG156500 Rh1DG163100 Rh1DG163300 |
| rosa_wichuraiana | Rw1G012740 Rw1G012830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 411 |
| AclWI | GGATC | 2 cut(s) | 12, 30 |
| AcoI | YGGCCR | 1 cut(s) | 63 |
| AfaI | GTAC | 1 cut(s) | 173 |
| AgsI | TTSAA | 1 cut(s) | 273 |
| AjnI | CCWGG | 2 cut(s) | 174, 415 |
| AluBI | AGCT | 2 cut(s) | 366, 396 |
| AluI | AGCT | 2 cut(s) | 366, 396 |
| AlwI | GGATC | 2 cut(s) | 12, 30 |
| AoxI | GGCC | 1 cut(s) | 63 |
| BaeGI | GKGCMC | 1 cut(s) | 416 |
| BalI | TGGCCA | 1 cut(s) | 65 |
| BanI | GGYRCC | 1 cut(s) | 411 |
| BccI | CCATC | 1 cut(s) | 274 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 79, 113 |
| BciT130I | CCWGG | 2 cut(s) | 176, 417 |
| Bme1390I | CCNGG | 2 cut(s) | 176, 417 |
| BmiI | GGNNCC | 2 cut(s) | 261, 413 |
| BmrFI | CCNGG | 2 cut(s) | 176, 417 |
| BpuEI | CTTGAG | 1 cut(s) | 134 |
| BsaJI | CCNNGG | 3 cut(s) | 18, 415, 416 |
| Bse3DI | GCAATG | 1 cut(s) | 97 |
| BseBI | CCWGG | 2 cut(s) | 176, 417 |
| BseDI | CCNNGG | 3 cut(s) | 18, 415, 416 |
| BseGI | GGATG | 1 cut(s) | 84 |
| BseMI | GCAATG | 1 cut(s) | 97 |
| BseMII | CTCAG | 1 cut(s) | 195 |
| BseSI | GKGCMC | 1 cut(s) | 416 |
| BshFI | GGCC | 1 cut(s) | 65 |
| BshNI | GGYRCC | 1 cut(s) | 411 |
| BsnI | GGCC | 1 cut(s) | 65 |
| Bsp1286I | GDGCHC | 1 cut(s) | 416 |
| Bsp143I | GATC | 2 cut(s) | 4, 22 |
| BspANI | GGCC | 1 cut(s) | 65 |
| BspCNI | CTCAG | 1 cut(s) | 196 |
| BspLI | GGNNCC | 2 cut(s) | 261, 413 |
| BspPI | GGATC | 2 cut(s) | 12, 30 |
| BspT107I | GGYRCC | 1 cut(s) | 411 |
| BsrDI | GCAATG | 1 cut(s) | 97 |
| BssECI | CCNNGG | 3 cut(s) | 18, 415, 416 |
| BssMI | GATC | 2 cut(s) | 4, 22 |
| BssT1I | CCWWGG | 1 cut(s) | 18 |
| Bst2UI | CCWGG | 2 cut(s) | 176, 417 |
| BstDEI | CTNAG | 1 cut(s) | 204 |
| BstF5I | GGATG | 1 cut(s) | 84 |
| BstKTI | GATC | 2 cut(s) | 7, 25 |
| BstMBI | GATC | 2 cut(s) | 4, 22 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 420 |
| BstNI | CCWGG | 2 cut(s) | 176, 417 |
| BstSCI | CCNGG | 2 cut(s) | 174, 415 |
| BstSLI | GKGCMC | 1 cut(s) | 416 |
| BsuRI | GGCC | 1 cut(s) | 65 |
| BtsCI | GGATG | 1 cut(s) | 84 |
| Csp6I | GTAC | 1 cut(s) | 172 |
| CviAII | CATG | 2 cut(s) | 218, 223 |
| CviJI | RGCY | 6 cut(s) | 38, 65, 203, 234, 366, 396 |
| CviKI_1 | RGCY | 6 cut(s) | 38, 65, 203, 234, 366, 396 |
| CviQI | GTAC | 1 cut(s) | 172 |
| DdeI | CTNAG | 1 cut(s) | 204 |
| DpnI | GATC | 2 cut(s) | 6, 24 |
| DpnII | GATC | 2 cut(s) | 4, 22 |
| EaeI | YGGCCR | 1 cut(s) | 63 |
| Eco130I | CCWWGG | 1 cut(s) | 18 |
| EcoRII | CCWGG | 2 cut(s) | 174, 415 |
| EcoT14I | CCWWGG | 1 cut(s) | 18 |
| ErhI | CCWWGG | 1 cut(s) | 18 |
| FaeI | CATG | 2 cut(s) | 221, 226 |
| FaiI | YATR | 8 cut(s) | 62, 68, 219, 224, 336, 360, 369, 399 |
| FatI | CATG | 2 cut(s) | 217, 222 |
| FokI | GGATG | 1 cut(s) | 91 |
| HaeIII | GGCC | 1 cut(s) | 65 |
| Hin1II | CATG | 2 cut(s) | 221, 226 |
| HinfI | GANTC | 4 cut(s) | 102, 107, 116, 145 |
| Hpy188I | TCNGA | 5 cut(s) | 27, 78, 101, 127, 166 |
| HpyAV | CCTTC | 4 cut(s) | 22, 130, 250, 375 |
| HpyCH4V | TGCA | 1 cut(s) | 252 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 420 |
| HpyF3I | CTNAG | 1 cut(s) | 204 |
| Hsp92II | CATG | 2 cut(s) | 221, 226 |
| Kzo9I | GATC | 2 cut(s) | 4, 22 |
| LpnPI | CCDG | 3 cut(s) | 161, 188, 402 |
| MalI | GATC | 2 cut(s) | 6, 24 |
| MboI | GATC | 2 cut(s) | 4, 22 |
| MboII | GAAGA | 4 cut(s) | 220, 261, 322, 390 |
| MhlI | GDGCHC | 1 cut(s) | 416 |
| MlsI | TGGCCA | 1 cut(s) | 65 |
| MluCI | AATT | 2 cut(s) | 227, 315 |
| MluNI | TGGCCA | 1 cut(s) | 65 |
| MmeI | TCCRAC | 1 cut(s) | 144 |
| MnlI | CCTC | 2 cut(s) | 193, 402 |
| Mox20I | TGGCCA | 1 cut(s) | 65 |
| MscI | TGGCCA | 1 cut(s) | 65 |
| MseI | TTAA | 2 cut(s) | 156, 321 |
| MslI | CAYNNNNRTG | 1 cut(s) | 59 |
| Msp20I | TGGCCA | 1 cut(s) | 65 |
| MspR9I | CCNGG | 2 cut(s) | 176, 417 |
| MvaI | CCWGG | 2 cut(s) | 176, 417 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 420 |
| NdeII | GATC | 2 cut(s) | 4, 22 |
| NlaIII | CATG | 2 cut(s) | 221, 226 |
| NlaIV | GGNNCC | 2 cut(s) | 261, 413 |
| NmeAIII | GCCGAG | 1 cut(s) | 66 |
| PasI | CCCWGGG | 1 cut(s) | 416 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 111 |
| PfeI | GAWTC | 4 cut(s) | 102, 107, 116, 145 |
| Psp6I | CCWGG | 2 cut(s) | 174, 415 |
| PspGI | CCWGG | 2 cut(s) | 174, 415 |
| PspN4I | GGNNCC | 2 cut(s) | 261, 413 |
| RsaI | GTAC | 1 cut(s) | 173 |
| RsaNI | GTAC | 1 cut(s) | 172 |
| RseI | CAYNNNNRTG | 1 cut(s) | 59 |
| SaqAI | TTAA | 2 cut(s) | 156, 321 |
| Sau3AI | GATC | 2 cut(s) | 4, 22 |
| ScrFI | CCNGG | 2 cut(s) | 176, 417 |
| SduI | GDGCHC | 1 cut(s) | 416 |
| SetI | ASST | 4 cut(s) | 261, 368, 398, 413 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 59 |
| SmlI | CTYRAG | 1 cut(s) | 149 |
| SmoI | CTYRAG | 1 cut(s) | 149 |
| Sse9I | AATT | 2 cut(s) | 227, 315 |
| SspI | AATATT | 1 cut(s) | 404 |
| StyD4I | CCNGG | 2 cut(s) | 174, 415 |
| StyI | CCWWGG | 1 cut(s) | 18 |
| TaqI | TCGA | 3 cut(s) | 105, 407, 427 |
| TasI | AATT | 2 cut(s) | 227, 315 |
| TfiI | GAWTC | 4 cut(s) | 102, 107, 116, 145 |
| Tru1I | TTAA | 2 cut(s) | 156, 321 |
| Tru9I | TTAA | 2 cut(s) | 156, 321 |
| TspDTI | ATGAA | 4 cut(s) | 149, 239, 323, 414 |