3'-5' exonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11770 AT5G06450 |
| fragaria_vesca | FvH4_3g21850 |
| prunus_persica | Prupe.4G202600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0037631 |
| rosa_laevigata | RLG00000033791 RLG00000033797 RLG00000034136 |
| rosa_roxburghii | Rroxscaffold_1G00043320 Rroxscaffold_1G00043380 |
| rosa_rugosa | Rorug05G0166200 |
| rosa_samantha | Rh5BG291800 Rh5CG290500 Rh5DG265600 Rh5DG266100 Rh5DG301600 |
| rosa_wichuraiana | Rw5G023660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 410 |
| AccIII | TCCGGA | 1 cut(s) | 449 |
| AclWI | GGATC | 1 cut(s) | 228 |
| AcsI | RAATTY | 1 cut(s) | 241 |
| AfaI | GTAC | 2 cut(s) | 87, 109 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 142 |
| AgsI | TTSAA | 2 cut(s) | 74, 254 |
| AluBI | AGCT | 3 cut(s) | 77, 274, 290 |
| AluI | AGCT | 3 cut(s) | 77, 274, 290 |
| AlwI | GGATC | 1 cut(s) | 228 |
| Ama87I | CYCGRG | 1 cut(s) | 78 |
| Aor13HI | TCCGGA | 1 cut(s) | 449 |
| ApeKI | GCWGC | 1 cut(s) | 114 |
| ApoI | RAATTY | 1 cut(s) | 241 |
| AsuHPI | GGTGA | 1 cut(s) | 345 |
| AvaI | CYCGRG | 1 cut(s) | 78 |
| AxyI | CCTNAGG | 1 cut(s) | 164 |
| BaeGI | GKGCMC | 1 cut(s) | 47 |
| BanI | GGYRCC | 1 cut(s) | 410 |
| BbvI | GCAGC | 1 cut(s) | 101 |
| BccI | CCATC | 1 cut(s) | 166 |
| BceAI | ACGGC | 1 cut(s) | 316 |
| BfaI | CTAG | 1 cut(s) | 54 |
| BisI | GCNGC | 1 cut(s) | 115 |
| BlsI | GCNGC | 1 cut(s) | 116 |
| BmeT110I | CYCGRG | 1 cut(s) | 78 |
| BmiI | GGNNCC | 2 cut(s) | 412, 454 |
| BsaWI | WCCGGW | 1 cut(s) | 449 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 142 |
| Bse1I | ACTGG | 3 cut(s) | 52, 67, 115 |
| Bse21I | CCTNAGG | 1 cut(s) | 164 |
| Bse3DI | GCAATG | 1 cut(s) | 402 |
| BseAI | TCCGGA | 1 cut(s) | 449 |
| BseGI | GGATG | 2 cut(s) | 158, 435 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BseMI | GCAATG | 1 cut(s) | 402 |
| BseMII | CTCAG | 1 cut(s) | 178 |
| BseNI | ACTGG | 3 cut(s) | 52, 67, 115 |
| BseSI | GKGCMC | 1 cut(s) | 47 |
| BseXI | GCAGC | 1 cut(s) | 101 |
| BsgI | GTGCAG | 1 cut(s) | 285 |
| BshNI | GGYRCC | 1 cut(s) | 410 |
| BsiHKCI | CYCGRG | 1 cut(s) | 78 |
| BsiSI | CCGG | 1 cut(s) | 450 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BsoBI | CYCGRG | 1 cut(s) | 78 |
| Bsp1286I | GDGCHC | 1 cut(s) | 47 |
| Bsp13I | TCCGGA | 1 cut(s) | 449 |
| Bsp143I | GATC | 1 cut(s) | 220 |
| BspCNI | CTCAG | 1 cut(s) | 177 |
| BspEI | TCCGGA | 1 cut(s) | 449 |
| BspLI | GGNNCC | 2 cut(s) | 412, 454 |
| BspPI | GGATC | 1 cut(s) | 228 |
| BspT107I | GGYRCC | 1 cut(s) | 410 |
| BsrDI | GCAATG | 1 cut(s) | 402 |
| BsrI | ACTGG | 3 cut(s) | 52, 67, 115 |
| BssMI | GATC | 1 cut(s) | 220 |
| Bst4CI | ACNGT | 2 cut(s) | 373, 462 |
| BstC8I | GCNNGC | 1 cut(s) | 409 |
| BstDEI | CTNAG | 2 cut(s) | 164, 275 |
| BstF5I | GGATG | 2 cut(s) | 158, 435 |
| BstKTI | GATC | 1 cut(s) | 223 |
| BstMBI | GATC | 1 cut(s) | 220 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 326 |
| BstSLI | GKGCMC | 1 cut(s) | 47 |
| BstV1I | GCAGC | 1 cut(s) | 101 |
| BstX2I | RGATCY | 1 cut(s) | 220 |
| BstYI | RGATCY | 1 cut(s) | 220 |
| Bsu36I | CCTNAGG | 1 cut(s) | 164 |
| BtsCI | GGATG | 2 cut(s) | 158, 435 |
| BtsI | GCAGTG | 1 cut(s) | 273 |
| BtsIMutI | CAGTG | 2 cut(s) | 45, 273 |
| Cac8I | GCNNGC | 1 cut(s) | 409 |
| Csp6I | GTAC | 2 cut(s) | 86, 108 |
| CviAII | CATG | 5 cut(s) | 40, 67, 193, 323, 388 |
| CviJI | RGCY | 5 cut(s) | 77, 114, 146, 274, 290 |
| CviKI_1 | RGCY | 5 cut(s) | 77, 114, 146, 274, 290 |
| CviQI | GTAC | 2 cut(s) | 86, 108 |
| DdeI | CTNAG | 2 cut(s) | 164, 275 |
| DpnI | GATC | 1 cut(s) | 222 |
| DpnII | GATC | 1 cut(s) | 220 |
| Eco32I | GATATC | 1 cut(s) | 190 |
| Eco81I | CCTNAGG | 1 cut(s) | 164 |
| Eco88I | CYCGRG | 1 cut(s) | 78 |
| EcoRV | GATATC | 1 cut(s) | 190 |
| FaeI | CATG | 5 cut(s) | 43, 70, 196, 326, 391 |
| FaiI | YATR | 9 cut(s) | 41, 68, 176, 194, 210, 324, 345, 381, 389 |
| FatI | CATG | 5 cut(s) | 39, 66, 192, 322, 387 |
| Fnu4HI | GCNGC | 1 cut(s) | 115 |
| FokI | GGATG | 2 cut(s) | 145, 422 |
| Fsp4HI | GCNGC | 1 cut(s) | 115 |
| FspBI | CTAG | 1 cut(s) | 54 |
| GluI | GCNGC | 1 cut(s) | 115 |
| HapII | CCGG | 1 cut(s) | 450 |
| Hin1II | CATG | 5 cut(s) | 43, 70, 196, 326, 391 |
| HpaII | CCGG | 1 cut(s) | 450 |
| HphI | GGTGA | 1 cut(s) | 345 |
| Hpy166II | GTNNAC | 2 cut(s) | 37, 108 |
| Hpy188III | TCNNGA | 2 cut(s) | 166, 450 |
| Hpy8I | GTNNAC | 2 cut(s) | 37, 108 |
| HpyAV | CCTTC | 2 cut(s) | 178, 425 |
| HpyCH4III | ACNGT | 2 cut(s) | 373, 462 |
| HpyCH4V | TGCA | 4 cut(s) | 266, 320, 341, 361 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 326 |
| HpyF3I | CTNAG | 2 cut(s) | 164, 275 |
| Hsp92II | CATG | 5 cut(s) | 43, 70, 196, 326, 391 |
| Kpn2I | TCCGGA | 1 cut(s) | 449 |
| Kzo9I | GATC | 1 cut(s) | 220 |
| LmnI | GCTCC | 2 cut(s) | 271, 326 |
| LpnPI | CCDG | 6 cut(s) | 33, 48, 96, 151, 393, 463 |
| Lsp1109I | GCAGC | 1 cut(s) | 101 |
| MaeI | CTAG | 1 cut(s) | 54 |
| MalI | GATC | 1 cut(s) | 222 |
| MboI | GATC | 1 cut(s) | 220 |
| MflI | RGATCY | 1 cut(s) | 220 |
| MhlI | GDGCHC | 1 cut(s) | 47 |
| MluCI | AATT | 2 cut(s) | 241, 336 |
| MnlI | CCTC | 5 cut(s) | 173, 211, 274, 449, 457 |
| MroI | TCCGGA | 1 cut(s) | 449 |
| MseI | TTAA | 1 cut(s) | 228 |
| MspI | CCGG | 1 cut(s) | 450 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 326 |
| NdeII | GATC | 1 cut(s) | 220 |
| NlaIII | CATG | 5 cut(s) | 43, 70, 196, 326, 391 |
| NlaIV | GGNNCC | 2 cut(s) | 412, 454 |
| NmeAIII | GCCGAG | 1 cut(s) | 122 |
| PkrI | GCNGC | 1 cut(s) | 116 |
| PspN4I | GGNNCC | 2 cut(s) | 412, 454 |
| PsuI | RGATCY | 1 cut(s) | 220 |
| RsaI | GTAC | 2 cut(s) | 87, 109 |
| RsaNI | GTAC | 2 cut(s) | 86, 108 |
| SaqAI | TTAA | 1 cut(s) | 228 |
| SatI | GCNGC | 1 cut(s) | 115 |
| Sau3AI | GATC | 1 cut(s) | 220 |
| SduI | GDGCHC | 1 cut(s) | 47 |
| SetI | ASST | 5 cut(s) | 79, 276, 285, 292, 358 |
| Sse9I | AATT | 2 cut(s) | 241, 336 |
| SspMI | CTAG | 1 cut(s) | 54 |
| TaaI | ACNGT | 2 cut(s) | 373, 462 |
| TaqI | TCGA | 1 cut(s) | 9 |
| TasI | AATT | 2 cut(s) | 241, 336 |
| TatI | WGTACW | 1 cut(s) | 107 |
| Tru1I | TTAA | 1 cut(s) | 228 |
| Tru9I | TTAA | 1 cut(s) | 228 |
| TscAI | CASTG | 2 cut(s) | 52, 273 |
| TseI | GCWGC | 1 cut(s) | 114 |
| TspDTI | ATGAA | 2 cut(s) | 197, 396 |
| TspGWI | ACGGA | 1 cut(s) | 379 |
| TspRI | CASTG | 2 cut(s) | 52, 273 |
| XapI | RAATTY | 1 cut(s) | 241 |
| XspI | CTAG | 1 cut(s) | 54 |