Polynucleotidyl transferase ribonuclease H-like superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11770 AT5G06450 |
| fragaria_vesca | FvH4_3g21850 |
| prunus_persica | Prupe.4G202600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0037631 |
| rosa_laevigata | RLG00000033791 RLG00000033797 RLG00000034136 |
| rosa_roxburghii | Rroxscaffold_1G00043320 Rroxscaffold_1G00043380 |
| rosa_rugosa | Rorug05G0166200 |
| rosa_samantha | Rh5BG291800 Rh5CG290500 Rh5DG265600 Rh5DG266100 Rh5DG301600 |
| rosa_wichuraiana | Rw5G023660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 102 |
| AcoI | YGGCCR | 1 cut(s) | 78 |
| AcsI | RAATTY | 1 cut(s) | 138 |
| AfaI | GTAC | 1 cut(s) | 67 |
| AflIII | ACRYGT | 1 cut(s) | 156 |
| AgsI | TTSAA | 1 cut(s) | 46 |
| AlwI | GGATC | 1 cut(s) | 102 |
| AoxI | GGCC | 1 cut(s) | 78 |
| ApoI | RAATTY | 1 cut(s) | 138 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 57, 90 |
| BccI | CCATC | 1 cut(s) | 56 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrI | ACTGGG | 1 cut(s) | 6 |
| BmuI | ACTGGG | 1 cut(s) | 6 |
| BoxI | GACNNNNGTC | 1 cut(s) | 159 |
| BsaJI | CCNNGG | 1 cut(s) | 81 |
| Bse1I | ACTGG | 1 cut(s) | 12 |
| BseDI | CCNNGG | 1 cut(s) | 81 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseMII | CTCAG | 1 cut(s) | 83 |
| BseNI | ACTGG | 1 cut(s) | 12 |
| BshFI | GGCC | 1 cut(s) | 80 |
| BsnI | GGCC | 1 cut(s) | 80 |
| Bsp143I | GATC | 1 cut(s) | 94 |
| BspANI | GGCC | 1 cut(s) | 80 |
| BspCNI | CTCAG | 1 cut(s) | 82 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 1 cut(s) | 102 |
| BsrI | ACTGG | 1 cut(s) | 12 |
| BssECI | CCNNGG | 1 cut(s) | 81 |
| BssMI | GATC | 1 cut(s) | 94 |
| Bst4CI | ACNGT | 1 cut(s) | 113 |
| BstDEI | CTNAG | 1 cut(s) | 69 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstKTI | GATC | 1 cut(s) | 97 |
| BstMBI | GATC | 1 cut(s) | 94 |
| BstNSI | RCATGY | 1 cut(s) | 160 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 159 |
| BsuRI | GGCC | 1 cut(s) | 80 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| Csp6I | GTAC | 1 cut(s) | 66 |
| CviAII | CATG | 1 cut(s) | 157 |
| CviJI | RGCY | 2 cut(s) | 7, 80 |
| CviKI_1 | RGCY | 2 cut(s) | 7, 80 |
| CviQI | GTAC | 1 cut(s) | 66 |
| DdeI | CTNAG | 1 cut(s) | 69 |
| DpnI | GATC | 1 cut(s) | 96 |
| DpnII | GATC | 1 cut(s) | 94 |
| EaeI | YGGCCR | 1 cut(s) | 78 |
| FaeI | CATG | 1 cut(s) | 160 |
| FaiI | YATR | 3 cut(s) | 51, 128, 158 |
| FatI | CATG | 1 cut(s) | 156 |
| FokI | GGATG | 1 cut(s) | 74 |
| HaeIII | GGCC | 1 cut(s) | 80 |
| Hin1II | CATG | 1 cut(s) | 160 |
| HinfI | GANTC | 1 cut(s) | 42 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy188I | TCNGA | 2 cut(s) | 19, 94 |
| Hpy188III | TCNNGA | 1 cut(s) | 143 |
| HpyAV | CCTTC | 2 cut(s) | 32, 52 |
| HpyCH4III | ACNGT | 1 cut(s) | 113 |
| HpyF3I | CTNAG | 1 cut(s) | 69 |
| Hsp92II | CATG | 1 cut(s) | 160 |
| Kzo9I | GATC | 1 cut(s) | 94 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 3 cut(s) | 25, 56, 149 |
| MaeIII | GTNAC | 1 cut(s) | 143 |
| MalI | GATC | 1 cut(s) | 96 |
| MboI | GATC | 1 cut(s) | 94 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MluCI | AATT | 1 cut(s) | 138 |
| MnlI | CCTC | 3 cut(s) | 76, 128, 134 |
| NdeII | GATC | 1 cut(s) | 94 |
| NlaIII | CATG | 1 cut(s) | 160 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmeAIII | GCCGAG | 1 cut(s) | 106 |
| NmuCI | GTSAC | 1 cut(s) | 143 |
| NspI | RCATGY | 1 cut(s) | 160 |
| PciI | ACATGT | 1 cut(s) | 156 |
| PfeI | GAWTC | 1 cut(s) | 42 |
| PscI | ACATGT | 1 cut(s) | 156 |
| PshAI | GACNNNNGTC | 1 cut(s) | 159 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| RsaI | GTAC | 1 cut(s) | 67 |
| RsaNI | GTAC | 1 cut(s) | 66 |
| Sau3AI | GATC | 1 cut(s) | 94 |
| SetI | ASST | 4 cut(s) | 75, 87, 126, 168 |
| SgeI | CNNG | 6 cut(s) | 24, 83, 94, 145, 155, 160 |
| Sse9I | AATT | 1 cut(s) | 138 |
| TaaI | ACNGT | 1 cut(s) | 113 |
| TasI | AATT | 1 cut(s) | 138 |
| TfiI | GAWTC | 1 cut(s) | 42 |
| TseFI | GTSAC | 1 cut(s) | 143 |
| Tsp45I | GTSAC | 1 cut(s) | 143 |
| TspDTI | ATGAA | 1 cut(s) | 71 |
| XapI | RAATTY | 1 cut(s) | 138 |
| XceI | RCATGY | 1 cut(s) | 160 |